Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.6e-81 304.7 250 100.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.1e-78 295.8 250 97.6
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 3.8e-76 288.9 250 96.4
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.8e-76 288.9 251 97.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.1e-75 287.3 250 96.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.5e-69 266.9 251 89.6
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.9e-53 211.8 198 96.5
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.2e-50 204.1 235 82.6
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.0e-36 157.9 238 72.3
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.7e-36 157.1 236 72.5
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.8e-36 156.0 242 71.9
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.5e-35 153.3 236 70.3
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 9.4e-35 151.4 239 68.6
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 4.7e-34 149.1 236 69.1
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.7e-34 149.1 234 70.1
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 7.9e-34 148.3 233 68.7
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.4e-33 147.5 238 69.3
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.8e-33 147.1 239 67.8
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 8.8e-33 144.8 229 70.3
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 1.1e-32 144.4 235 67.7
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.5e-32 144.1 248 67.7
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.7e-32 142.1 237 68.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 7.4e-32 141.7 256 66.0
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 9.7e-32 141.4 234 68.8
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.3e-31 138.7 238 68.9
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 6.3e-31 138.7 232 70.7
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 5.3e-30 135.6 253 64.8
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.6e-29 133.3 248 65.3
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 3.5e-29 132.9 233 66.5
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 4.5e-29 132.5 239 65.3
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 7.7e-29 131.7 238 67.6
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 7.7e-29 131.7 234 67.1
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.0e-28 131.3 238 66.4
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.7e-28 130.6 237 53.2
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.5e-27 127.5 255 63.1
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.9e-27 127.1 255 63.1
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.5e-27 126.7 244 63.1
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.5e-27 126.7 244 63.1
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 2.5e-27 126.7 248 65.3
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 3.2e-27 126.3 234 64.1
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 3.2e-27 126.3 236 65.3
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 4.2e-27 125.9 235 66.4
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 4.2e-27 125.9 254 63.4
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 5.5e-27 125.6 237 65.8
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 5.5e-27 125.6 234 66.2
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 9.4e-27 124.8 257 61.1
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.6e-26 124.0 244 62.3
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.6e-26 124.0 244 62.3
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.1e-26 123.6 260 59.6
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 3.6e-26 122.9 239 64.9
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 3.6e-26 122.9 232 65.9
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 3.6e-26 122.9 245 60.8
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.7e-26 122.5 237 62.4
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 8.0e-26 121.7 239 52.7
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.0e-25 121.3 242 64.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.4e-25 120.9 237 62.4
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.8e-25 120.6 233 63.5
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 2.3e-25 120.2 249 61.4
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.0e-25 119.8 240 63.8
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 5.2e-25 119.0 233 65.7
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 5.2e-25 119.0 233 64.4
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 5.2e-25 119.0 239 64.0
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 6.7e-25 118.6 233 63.1
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 8.8e-25 118.2 206 69.4
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.2e-24 117.9 233 64.8
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 2.0e-24 117.1 256 62.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.6e-24 116.7 241 63.5
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 4.4e-24 115.9 79 70.9
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 5.7e-24 115.5 271 57.2
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 7.5e-24 115.2 235 62.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 7.5e-24 115.2 163 83.4
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 9.7e-24 114.8 237 63.3
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.3e-23 114.4 254 61.4
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 1.7e-23 114.0 287 55.7
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.8e-23 113.2 171 78.9
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-23 112.8 248 61.3
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-23 112.8 248 61.3
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 4.8e-23 112.5 67 79.1
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.4e-22 110.9 252 63.1
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 2.4e-22 110.2 235 60.9
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 1.6e-21 107.5 191 69.6
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 2.0e-21 107.1 204 68.6
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 2.0e-21 107.1 235 63.4
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.0e-21 107.1 225 65.8
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 2.0e-21 107.1 234 64.5
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 2.7e-21 106.7 232 63.4
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.7e-21 106.7 67 74.6
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 4.5e-21 105.9 188 73.9
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.2e-20 103.6 181 56.4
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.9e-20 103.2 204 69.6
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 3.2e-19 99.8 226 61.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.2e-18 97.8 231 63.2
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 3.6e-18 96.3 202 69.3
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 6.1e-18 95.5 232 57.8
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.3e-17 93.6 58 72.4
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 6.8e-17 92.0 67 62.7
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.2e-16 91.3 234 60.7
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.6e-16 90.1 67 68.7
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.6e-16 90.1 67 61.2
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.2e-15 87.0 67 67.2
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 8.3e-15 85.1 280 53.2
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 4.1e-14 82.8 203 66.0
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 9.1e-14 81.6 242 55.8
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.7e-12 77.4 267 53.6
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.7e-12 77.4 203 32.5
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-11 73.2 211 60.2
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.2e-11 73.2 198 50.0
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 4.2e-11 72.8 51 58.8
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 5.5e-11 72.4 250 57.6
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 3.6e-10 69.7 197 65.5
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 8.0e-10 68.6 183 45.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 8.8e-09 65.1 44 65.9
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 8.8e-09 65.1 102 49.0
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 1.2e-08 64.7 256 53.9
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.1e-06 58.2 33 72.7


User provided reference genes

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