Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3217 Fragaria x ananassa HOM05D017367 ORTHO05D000014 9.1e-59 229.9 109 100.0
FvH4_5g08811 Fragaria vesca HOM05D000023 ORTHO05D000014 7.0e-27 124.0 162 46.3
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 4.2e-24 114.8 174 41.4
FAN14G3485 Fragaria x ananassa HOM05D017367 ORTHO05D000014 2.0e-21 105.9 186 39.2
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 4.4e-21 104.8 67 71.6
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 7.5e-21 104.0 67 71.6
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-14 82.0 112 38.4
FvH4_7g16804 Fragaria vesca HOM05D000023 ORTHO05D000014 5.2e-14 81.3 67 52.2
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-11 72.4 67 47.8
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-11 71.6 67 47.8
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-11 71.6 67 47.8
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 70.5 67 46.3
SHI36074 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 70.5 67 46.3
SHI04614 Sapria himalayana HOM05D000024 ORTHO05D000014 1.6e-10 69.7 67 47.8
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 4.6e-10 68.2 67 47.8
FAN21G2495 Fragaria x ananassa HOM05D000023 ORTHO05D000014 6.0e-10 67.8 39 71.8
RcHm_v2.0_Chr4g0434271 Rosa chinensis HOM05D000023 ORTHO05D000014 7.8e-10 67.4 67 43.3
RcHm_v2.0_Chr7g0205371 Rosa chinensis HOM05D000023 ORTHO05D000014 7.8e-10 67.4 67 43.3
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 7.8e-10 67.4 67 46.3
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 1.0e-09 67.0 65 47.7
arahy.Tifrunner.gnm1.ann1.UW16ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 1.0e-09 67.0 65 47.7
SHI27157 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-09 66.6 64 46.9
FAN17G2570 Fragaria x ananassa HOM05D017367 ORTHO05D000014 2.3e-09 65.9 41 80.5
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-09 65.5 65 46.2
COL.COLO4_04576 Corchorus olitorius HOM05D000023 ORTHO05D000014 3.0e-09 65.5 98 35.7
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 5.0e-09 64.7 67 46.3
CARHR056780 Cardamine hirsuta HOM05D000023 ORTHO05D000014 8.6e-09 63.9 52 53.8
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.6e-09 63.9 65 46.2
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.6e-09 63.9 65 46.2
FvH4_6g31871 Fragaria vesca HOM05D017367 ORTHO05D000014 1.1e-08 63.5 43 74.4
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.3e-08 61.6 65 44.6
TPR.G19693 Trifolium pratense HOM05D000023 ORTHO05D000014 7.3e-08 60.8 65 46.2
CSS0004099 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
CSS0022109 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
CSS0027022 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
CSS0034414 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
CSS0040453 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
CSS0042290 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-07 60.1 69 43.5
Lj2g0000793 Lotus japonicus HOM05D000023 ORTHO05D000014 1.2e-07 60.1 167 25.1
Lj6g0018275 Lotus japonicus HOM05D000023 ORTHO05D000014 1.2e-07 60.1 167 25.1
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-07 60.1 174 25.9
CSS0004538 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-07 59.7 69 43.5
SHI01148 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-07 59.7 63 41.3
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 2.8e-07 58.9 67 38.8
TPR.G30137 Trifolium pratense HOM05D000023 ORTHO05D000014 2.8e-07 58.9 65 46.2
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 6.2e-07 57.8 62 41.9
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 6.2e-07 57.8 155 26.5
arahy.Tifrunner.gnm1.ann1.1V5VYE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-06 57.0 65 41.5
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-06 57.0 65 41.5
arahy.Tifrunner.gnm1.ann1.MNFB2B Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-06 57.0 65 41.5
CSS0014085 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-06 57.0 69 42.0
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.4e-06 56.6 65 41.5
CSS0021122 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-06 56.6 69 42.0
FvH4_6g10272 Fragaria vesca HOM05D000023 ORTHO05D000014 1.8e-06 56.2 53 47.2
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-06 56.2 65 41.5
arahy.Tifrunner.gnm1.ann1.27VNL1 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.8 66 39.4
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.8 65 40.0
arahy.Tifrunner.gnm1.ann1.QCU1HD Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.8 150 26.7
arahy.Tifrunner.gnm1.ann1.QH0NII Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.8 65 40.0
PSO063G1377 Papaver somniferum HOM05D000023 ORTHO05D000014 3.1e-06 55.5 65 40.0
arahy.Tifrunner.gnm1.ann1.BV9JUH Arachis hypogaea HOM05D000013 ORTHO05D000011 4.0e-06 55.1 65 40.0
arahy.Tifrunner.gnm1.ann1.JSNF9J Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-06 55.1 151 26.5
arahy.Tifrunner.gnm1.ann1.Y156SF Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO017G1031 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO017G4761 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO170G1134 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO170G1947 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO210G0286 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO478G3870 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 55.1 65 40.0
QL01p016263 Quercus lobata HOM05D000023 ORTHO05D000014 5.2e-06 54.7 65 40.0
arahy.Tifrunner.gnm1.ann1.A927LK Arachis hypogaea HOM05D000023 ORTHO05D000014 6.8e-06 54.3 65 40.0
arahy.Tifrunner.gnm1.ann1.0KMR65 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-06 53.9 138 26.8
arahy.Tifrunner.gnm1.ann1.LRBE31 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-06 53.9 65 38.5
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 8.9e-06 53.9 65 38.5
arahy.Tifrunner.gnm1.ann1.T2ZBNM Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-06 53.9 65 38.5
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-06 53.9 65 38.5
FAN21G1001 Fragaria x ananassa HOM05D017367 ORTHO05D000014 8.9e-06 53.9 36 77.8


User provided reference genes

Program Settings