Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.0e-87 325.1 159 100.0
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 3.7e-69 265.0 135 97.8
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.0e-59 232.6 123 92.7
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.8e-58 228.4 123 91.1
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 2.4e-52 209.1 123 83.7
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.5e-46 189.9 123 73.2
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.1e-44 181.8 123 69.9
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 5.4e-44 181.4 123 69.9
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.5e-43 178.7 123 69.1
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.0e-42 177.2 123 69.9
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.3e-42 176.0 123 69.9
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 3.0e-42 175.6 134 61.2
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 3.3e-41 172.2 123 65.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 5.6e-41 171.4 123 66.7
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.2e-40 170.2 124 65.3
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.2e-40 170.2 123 66.7
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.2e-40 170.2 123 64.2
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.2e-40 170.2 134 59.7
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.6e-40 169.9 123 65.9
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 2.1e-40 169.5 123 66.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.1e-40 169.5 123 65.9
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.8e-40 169.1 123 67.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 2.8e-40 169.1 123 65.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.8e-40 169.1 134 61.9
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 2.8e-40 169.1 134 60.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.6e-40 168.7 123 63.4
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.6e-40 168.7 121 63.6
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 4.7e-40 168.3 123 65.0
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.2e-40 167.9 123 64.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.2e-40 167.9 123 64.2
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 8.1e-40 167.5 126 64.3
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.1e-39 167.2 123 65.0
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 1.8e-39 166.4 123 64.2
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 3.1e-39 165.6 123 61.8
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 4.0e-39 165.2 122 64.8
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 4.0e-39 165.2 126 64.3
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.9e-39 164.1 121 62.8
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.5e-38 163.3 123 61.8
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.5e-38 163.3 123 61.8
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 2.0e-38 162.9 122 60.7
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.6e-38 162.5 123 62.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 4.4e-38 161.8 123 63.4
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 4.4e-38 161.8 134 58.2
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 7.5e-38 161.0 134 56.0
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 9.8e-38 160.6 122 61.5
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.3e-37 160.2 123 62.6
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.3e-37 160.2 123 64.2
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.7e-37 159.8 121 62.0
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.7e-37 159.8 123 61.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.7e-37 159.8 123 61.0
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.7e-37 159.8 123 64.2
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 2.2e-37 159.5 122 60.7
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 2.2e-37 159.5 122 60.7
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.2e-37 159.5 123 62.6
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 2.9e-37 159.1 123 61.0
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.9e-37 159.1 122 63.9
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 3.7e-37 158.7 123 64.2
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.9e-37 158.3 123 61.8
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 4.9e-37 158.3 122 59.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 6.4e-37 157.9 123 61.8
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 8.3e-37 157.5 128 60.9
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 8.3e-37 157.5 128 60.9
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.3e-37 157.5 123 62.6
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.1e-36 157.1 122 61.5
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.9e-36 156.4 123 61.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.9e-36 156.4 122 60.7
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 2.4e-36 156.0 123 63.4
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 3.2e-36 155.6 123 58.5
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 3.2e-36 155.6 128 57.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 5.4e-36 154.8 113 64.6
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 7.1e-36 154.5 123 61.8
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 7.1e-36 154.5 128 54.7
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 7.1e-36 154.5 134 55.2
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.2e-35 153.7 123 58.5
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.6e-35 153.3 128 57.8
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.1e-35 152.9 123 60.2
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 3.5e-35 152.1 123 59.3
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 3.5e-35 152.1 134 54.5
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.3e-34 150.2 134 52.2
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.3e-34 150.2 123 59.3
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.7e-34 149.8 123 61.8
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.0e-34 149.1 134 51.5
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 5.1e-34 148.3 123 60.2
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 6.6e-34 147.9 136 55.9
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 8.6e-34 147.5 123 57.7
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 8.6e-34 147.5 121 57.0
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.1e-33 147.1 121 57.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.3e-33 145.2 129 58.9
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 4.3e-33 145.2 123 56.1
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 5.6e-33 144.8 115 59.1
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.8e-32 142.5 103 64.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.4e-31 140.2 124 52.4
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 2.0e-30 136.3 134 52.2
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.3e-29 133.7 114 57.9
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.9e-28 129.8 114 56.1
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 9.2e-28 127.5 133 51.1
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.6e-24 116.7 106 59.4
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 3.8e-21 105.5 86 60.5
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 2.7e-19 99.4 78 59.0
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 4.6e-19 98.6 86 57.0
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.7e-18 96.7 97 51.5
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.1e-12 77.4 72 51.4
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 5.4e-12 75.1 116 41.4
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.0e-10 69.3 83 44.6
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 4.0e-07 58.9 136 28.7
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 9.0e-07 57.8 46 63.0
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.2e-06 57.4 49 61.2
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.6e-06 54.7 50 58.0


User provided reference genes

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