Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.8e-76 287.0 154 100.0
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.8e-76 287.0 154 100.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 7.5e-75 283.9 154 98.7
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-70 270.0 176 85.8
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.1e-69 264.2 185 81.6
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 8.0e-69 263.8 152 90.8
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 6.1e-53 211.1 152 73.0
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 2.2e-50 202.6 152 68.4
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.4e-49 199.9 152 68.4
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 6.2e-45 184.5 146 67.1
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.4e-43 178.3 146 65.8
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 5.8e-43 177.9 136 69.9
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.3e-42 176.8 148 62.8
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.7e-42 176.4 143 64.3
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.7e-42 176.4 147 63.9
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.7e-42 176.4 138 68.1
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.2e-42 176.0 141 64.5
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 2.9e-42 175.6 148 62.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 6.4e-42 174.5 147 63.3
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.1e-41 173.7 143 63.6
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.9e-41 172.9 148 61.5
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.4e-41 172.6 146 61.6
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 7.1e-41 171.0 131 67.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 9.2e-41 170.6 144 61.8
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.2e-40 170.2 139 63.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.1e-40 169.5 141 62.4
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.1e-40 169.5 141 63.1
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 2.1e-40 169.5 141 63.1
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.7e-40 169.1 141 63.8
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 6.0e-40 167.9 139 64.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 7.8e-40 167.5 138 65.2
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.0e-39 167.2 141 61.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.0e-39 167.2 126 67.5
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.0e-39 167.2 131 65.6
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 1.7e-39 166.4 129 69.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.9e-39 165.2 154 62.3
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.9e-39 165.2 141 62.4
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 3.9e-39 165.2 143 62.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 8.6e-39 164.1 147 59.2
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 8.6e-39 164.1 143 62.2
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 8.6e-39 164.1 141 65.2
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.5e-38 163.3 123 69.1
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.9e-38 162.9 141 60.3
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.5e-38 162.5 125 69.6
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.5e-38 162.5 140 62.1
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.6e-38 161.4 141 61.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 7.3e-38 161.0 144 61.8
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 7.3e-38 161.0 141 60.3
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 9.5e-38 160.6 144 61.8
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.5e-38 160.6 141 59.6
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-37 160.2 136 61.8
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 1.6e-37 159.8 142 59.2
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.6e-37 159.8 137 61.3
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.6e-37 159.8 139 62.6
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.6e-37 158.7 149 56.4
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.7e-37 158.3 150 58.0
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 6.2e-37 157.9 126 68.3
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 8.1e-37 157.5 131 62.6
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 8.1e-37 157.5 127 63.8
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.1e-37 157.5 132 61.4
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.1e-36 157.1 137 65.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.4e-36 156.8 141 59.6
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.8e-36 156.4 137 59.9
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.8e-36 156.4 113 72.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.8e-36 156.4 149 55.7
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.3e-36 156.0 145 58.6
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.3e-36 156.0 147 57.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 4.0e-36 155.2 139 61.2
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 4.0e-36 155.2 141 61.0
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 5.2e-36 154.8 149 55.7
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 6.8e-36 154.5 141 58.9
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 6.8e-36 154.5 141 58.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 6.8e-36 154.5 123 65.0
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 6.8e-36 154.5 132 61.4
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 8.9e-36 154.1 140 58.6
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.2e-35 153.7 130 63.8
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 2.0e-35 152.9 112 69.6
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 2.6e-35 152.5 147 57.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.4e-35 152.1 149 54.4
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 5.8e-35 151.4 131 58.8
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 5.8e-35 151.4 119 67.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.3e-34 150.2 141 55.3
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.3e-34 150.2 153 53.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 2.2e-34 149.4 132 59.8
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.9e-34 149.1 146 54.8
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 4.9e-34 148.3 125 63.2
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.9e-33 146.4 138 56.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.9e-33 146.4 119 63.0
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 4.1e-33 145.2 141 54.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 5.4e-33 144.8 134 59.7
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 5.4e-33 144.8 141 54.6
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 5.4e-33 144.8 130 56.9
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 5.4e-33 144.8 141 54.6
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 9.2e-33 144.1 141 54.6
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.2e-32 143.7 131 56.5
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.6e-32 143.3 134 56.0
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.1e-32 142.9 141 53.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 6.0e-32 141.4 139 54.7
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 6.0e-32 141.4 139 54.7
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.0e-31 140.6 208 43.8
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 3.9e-31 138.7 130 56.9
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 5.6e-30 134.8 131 54.2
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 7.3e-30 134.4 125 57.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 9.6e-30 134.0 136 52.2
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 1.6e-29 133.3 146 50.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.1e-28 130.6 120 55.8
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 6.8e-28 127.9 131 51.1
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.2e-27 127.1 131 51.9
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.4e-27 125.6 151 46.4
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.9e-26 122.5 113 60.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.9e-26 122.5 135 48.9
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 3.8e-26 122.1 110 57.3
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.9e-23 112.1 106 57.5
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 3.9e-23 112.1 304 31.2
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.1e-22 110.5 107 54.2
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.6e-21 106.7 117 54.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-18 96.7 73 69.9
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.6e-16 90.1 111 45.0
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.3e-15 87.0 104 51.0
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 9.6e-14 80.9 76 55.3
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 6.9e-12 74.7 72 52.8
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.0e-12 74.3 125 39.2
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.0e-12 74.3 125 39.2
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 8.4e-10 67.8 102 42.2
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.2e-08 63.9 65 53.8


User provided reference genes

Program Settings