Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2941 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-55 218.8 103 100.0
FAN13G0886 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-42 175.6 86 94.2
FAN18G2144 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-20 102.8 89 60.7
FAN04G1849 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.6e-19 97.4 87 59.8
FAN11G4015 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.1e-17 90.5 76 52.6
FAN16G2319 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-16 88.6 74 54.1
FAN25G0460 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-16 88.6 86 47.7
MD00G1057500 Malus domestica HOM05D000151 ORTHO05D000074 1.7e-14 82.8 87 44.8
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 8.4e-14 80.5 74 51.4
RcHm_v2.0_Chr5g0032291 Rosa chinensis HOM05D000151 ORTHO05D000074 8.4e-14 80.5 74 50.0
FAN20G0623 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.2e-13 78.6 75 50.7
RcHm_v2.0_Chr6g0290601 Rosa chinensis HOM05D000151 ORTHO05D000074 3.2e-13 78.6 92 40.2
RcHm_v2.0_Chr6g0290581 Rosa chinensis HOM05D000151 ORTHO05D000074 4.2e-13 78.2 92 40.2
Prupe.8G190900 Prunus persica HOM05D000151 ORTHO05D000074 7.1e-13 77.4 100 39.0
FAN24G1140 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.3e-13 77.0 75 50.7
FAN08G1112 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.7e-12 75.5 60 63.3
FAN08G1298 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.5e-12 75.1 81 39.5
FAN13G0841 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-11 73.6 61 59.0
FvH4_5g23981 Fragaria vesca HOM05D000151 ORTHO05D000074 1.7e-11 72.8 83 43.4
Prupe.8G190800 Prunus persica HOM05D000151 ORTHO05D000074 2.3e-11 72.4 67 47.8
FAN04G2560 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.0e-11 72.0 71 40.8
CAN.G726.19 Capsicum annuum HOM05D000151 ORTHO05D000074 3.9e-11 71.6 76 43.4
Prupe.4G213300 Prunus persica HOM05D000151 ORTHO05D000074 6.6e-11 70.9 91 41.8
CAN.G532.33 Capsicum annuum HOM05D000151 ORTHO05D000074 8.7e-11 70.5 75 44.0
Nitab4.5_0000798g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-10 70.1 77 44.2
Nitab4.5_0028739g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-10 70.1 77 44.2
Nitab4.5_0000798g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.5e-10 69.7 77 44.2
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.9e-10 69.3 85 41.2
Peaxi162Scf00760g10023 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-10 69.3 78 41.0
CAN.G630.63 Capsicum annuum HOM05D000151 ORTHO05D000074 2.5e-10 68.9 78 44.9
CAN.G630.69 Capsicum annuum HOM05D000151 ORTHO05D000074 2.5e-10 68.9 77 42.9
PGSC0003DMG400027899 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.3e-10 68.2 78 42.3
Nitab4.5_0002367g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.6e-10 67.8 78 42.3
FvH4_5g22341 Fragaria vesca HOM05D000151 ORTHO05D000074 7.3e-10 67.4 78 38.5
PGSC0003DMG400040430 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.3e-10 67.4 76 42.1
Peaxi162Scf00271g00224 Petunia axillaris HOM05D000151 ORTHO05D000074 9.6e-10 67.0 79 44.3
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 1.3e-09 66.6 89 38.2
Peaxi162Scf39827g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-09 66.2 77 44.2
PGSC0003DMG400001736 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-09 66.2 74 41.9
FAN13G0355 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.1e-09 65.9 82 42.7
FAN04G2792 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-09 65.5 80 43.8
FAN18G1644 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-09 65.5 77 42.9
FAN18G1831 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-09 65.5 77 42.9
Nitab4.5_0001179g0150 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.8e-09 65.5 75 38.7
Peaxi162Scf00074g00630 Petunia axillaris HOM05D000151 ORTHO05D000074 2.8e-09 65.5 86 38.4
FAN08G3532 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.6e-09 65.1 70 40.0
Nitab4.5_0003015g0050 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.6e-09 65.1 79 41.8
Peaxi162Scf00062g00069 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-09 65.1 75 38.7
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-09 65.1 74 43.2
Peaxi162Scf00111g00720 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-09 65.1 77 44.2
PGSC0003DMG400001765 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.6e-09 65.1 76 39.5
FAN13G3246 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.8e-09 64.7 81 37.0
Nitab4.5_0001095g0040 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.8e-09 64.7 79 43.0
Nitab4.5_0002829g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.8e-09 64.7 73 39.7
Peaxi162Scf00074g00073 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-09 64.7 75 41.3
Peaxi162Scf00746g00033 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-09 64.7 77 41.6
PGSC0003DMG400012271 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.8e-09 64.7 78 41.0
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.2e-09 64.3 84 40.5
Peaxi162Scf02151g00007 Petunia axillaris HOM05D000151 ORTHO05D000074 6.2e-09 64.3 77 39.0
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 6.2e-09 64.3 77 42.9
PGSC0003DMG400009902 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.2e-09 64.3 77 42.9
CAN.G567.2 Capsicum annuum HOM05D000151 ORTHO05D000074 8.1e-09 63.9 77 40.3
Sopen08g030770 Solanum pennellii HOM05D000151 ORTHO05D000074 8.1e-09 63.9 78 42.3
PGSC0003DMG400003927 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.1e-09 63.9 80 42.5
Nitab4.5_0005962g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-08 63.5 71 43.7
PGSC0003DMG400001764 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.1e-08 63.5 76 40.8
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-08 63.5 73 39.7
FAN15G2858 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.4e-08 63.2 74 44.6
Peaxi162Scf00119g00111 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-08 63.2 77 37.7
Peaxi162Scf00848g00114 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-08 63.2 73 45.2
PGSC0003DMG400040741 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.4e-08 63.2 77 42.9
CAN.G363.17 Capsicum annuum HOM05D000151 ORTHO05D000074 1.8e-08 62.8 77 39.0
CAN.G567.43 Capsicum annuum HOM05D000151 ORTHO05D000074 1.8e-08 62.8 77 39.0
Solyc09g007220.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.4e-08 62.4 78 42.3
Cc08_g07070 Coffea canephora HOM05D000151 ORTHO05D000074 3.1e-08 62.0 74 39.2
PGSC0003DMG400043347 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.1e-08 62.0 73 38.4
PGSC0003DMG402028917 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.1e-08 62.0 73 38.4
PGSC0003DMG400012867 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.0e-08 61.6 89 40.4
CAN.G567.1 Capsicum annuum HOM05D000151 ORTHO05D000074 5.3e-08 61.2 73 41.1
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 5.3e-08 61.2 88 34.1
Solyc06g068630.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.3e-08 61.2 73 38.4
Peaxi162Scf00074g00077 Petunia axillaris HOM05D000151 ORTHO05D000074 6.9e-08 60.8 72 43.1
Nitab4.5_0008013g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 9.0e-08 60.5 77 40.3
Prupe.6G285400 Prunus persica HOM05D000151 ORTHO05D000074 9.0e-08 60.5 78 42.3
Rhsim02G0249600 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.0e-08 60.5 59 44.1
Sopen06g025910 Solanum pennellii HOM05D000151 ORTHO05D000074 9.0e-08 60.5 73 37.0
PGSC0003DMG400003926 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.0e-08 60.5 75 41.3
PGSC0003DMG400034482 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.0e-08 60.5 88 37.5
PGSC0003DMG400037580 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.0e-08 60.5 80 38.8
PGSC0003DMG400041659 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.0e-08 60.5 72 43.1
Peaxi162Scf00064g01639 Petunia axillaris HOM05D000151 ORTHO05D000074 1.2e-07 60.1 73 38.4
PGSC0003DMG400012270 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-07 60.1 77 37.7
PGSC0003DMG400035309 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-07 60.1 80 38.8
PGSC0003DMG400041413 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-07 60.1 77 37.7
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-07 60.1 87 37.9
Hma1.2p1_0311F.1_g121220 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.5e-07 59.7 89 36.0
Nitab4.5_0009558g0040 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.5e-07 59.7 77 41.6
PGSC0003DMG400040058 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-07 59.7 78 39.7
Cc08_g07100 Coffea canephora HOM05D000151 ORTHO05D000074 2.0e-07 59.3 70 40.0
Peaxi162Scf00746g00510 Petunia axillaris HOM05D000151 ORTHO05D000074 2.0e-07 59.3 82 37.8
Peaxi162Scf58999g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 2.0e-07 59.3 82 37.8
Rhsim02G0249500 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.0e-07 59.3 56 46.4
TAR636G2053 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-07 59.3 74 43.2
CAN.G303.45 Capsicum annuum HOM05D000151 ORTHO05D000074 2.6e-07 58.9 77 37.7
CAN.G630.77 Capsicum annuum HOM05D000151 ORTHO05D000074 2.6e-07 58.9 69 40.6
Hma1.2p1_0367F.1_g137170 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.6e-07 58.9 87 37.9
Rhsim05G0084900 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.6e-07 58.9 61 42.6
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-07 58.9 73 38.4
FAN18G3781 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.4e-07 58.5 69 42.0
FAN18G4282 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.4e-07 58.5 69 42.0
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 3.4e-07 58.5 77 35.1
PGSC0003DMG400012285 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.4e-07 58.5 59 45.8
PGSC0003DMG400001762 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.5e-07 58.2 78 38.5
PGSC0003DMG400041657 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.5e-07 58.2 68 42.6
FvH4_2g22763 Fragaria vesca HOM05D000151 ORTHO05D000074 7.6e-07 57.4 98 33.7
Hma1.2p1_0792F.1_g218540 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 7.6e-07 57.4 61 47.5
Peaxi162Scf00089g01849 Petunia axillaris HOM05D000151 ORTHO05D000074 7.6e-07 57.4 64 45.3
PGSC0003DMG400018188 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.6e-07 57.4 88 35.2
Solyc08g082485.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 9.9e-07 57.0 69 42.0
Sopen08g030590 Solanum pennellii HOM05D000151 ORTHO05D000074 9.9e-07 57.0 59 45.8
PGSC0003DMG400003928 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.9e-07 57.0 74 41.9
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.9e-07 57.0 74 43.2
CAN.G567.4 Capsicum annuum HOM05D000151 ORTHO05D000074 1.3e-06 56.6 67 41.8
PGSC0003DMG400018156 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.3e-06 56.6 86 34.9
CAN.G220.35 Capsicum annuum HOM05D000151 ORTHO05D000074 1.7e-06 56.2 76 40.8
Peaxi162Scf00714g00059 Petunia axillaris HOM05D000151 ORTHO05D000074 1.7e-06 56.2 71 39.4
Rhsim09G0105800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.7e-06 56.2 63 36.5
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 1.7e-06 56.2 61 41.0
PGSC0003DMG400045057 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.7e-06 56.2 81 37.0
CAN.G532.122 Capsicum annuum HOM05D000151 ORTHO05D000074 2.2e-06 55.8 59 42.4
FAN15G3715 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.2e-06 55.8 71 43.7
Lalb_Chr10g0091511 Lupinus albus HOM05D000151 ORTHO05D000074 2.2e-06 55.8 73 37.0
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.2e-06 55.8 72 43.1
Rhsim02G0223000 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.2e-06 55.8 75 33.3
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-06 55.8 72 41.7
FAN24G2887 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-06 55.5 64 46.9
Hma1.2p1_0311F.1_g121210 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.9e-06 55.5 88 35.2
MD05G1079000 Malus domestica HOM05D000151 ORTHO05D000074 2.9e-06 55.5 42 45.2
Peaxi162Scf00280g00034 Petunia axillaris HOM05D000151 ORTHO05D000074 2.9e-06 55.5 71 40.8
Peaxi162Scf00746g00028 Petunia axillaris HOM05D000151 ORTHO05D000074 2.9e-06 55.5 56 44.6
RcHm_v2.0_Chr5g0006331 Rosa chinensis HOM05D000151 ORTHO05D000074 2.9e-06 55.5 91 38.5
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-06 55.5 71 38.0
PGSC0003DMG400043167 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.8e-06 55.1 88 35.2
AUR62012295 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.9e-06 54.7 67 35.8
Cfa008697 Carpinus fangiana HOM05D000151 ORTHO05D000074 6.4e-06 54.3 90 35.6
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 6.4e-06 54.3 65 41.5
Rhsim11G0176200 Rhododendron simsii HOM05D000151 ORTHO05D000074 6.4e-06 54.3 100 32.0
PGSC0003DMG400012148 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.4e-06 54.3 72 34.7
PGSC0003DMG400012150 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.4e-06 54.3 72 36.1
vmacro11301 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 6.4e-06 54.3 54 44.4
Hma1.2p1_2715F.1_g327430 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 8.4e-06 53.9 89 34.8
Lalb_Chr10g0091531 Lupinus albus HOM05D000151 ORTHO05D000074 8.4e-06 53.9 73 35.6
Peaxi162Scf00132g00056 Petunia axillaris HOM05D000151 ORTHO05D000074 8.4e-06 53.9 54 46.3


User provided reference genes

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