Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2892 Fragaria x ananassa HOM05D010931 ORTHO05D013603 0.0e+00 1366.7 655 100.0
FAN13G2642 Fragaria x ananassa HOM05D010931 ORTHO05D013603 0.0e+00 1261.5 688 90.4
FAN08G1863 Fragaria x ananassa HOM05D010931 ORTHO05D013603 5.5e-236 821.2 683 65.4
FAN04G2702 Fragaria x ananassa HOM05D010931 ORTHO05D013603 9.5e-212 740.7 457 82.3
FAN18G3160 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.3e-197 693.0 411 84.2
FvH4_5g03600 Fragaria vesca HOM05D010931 ORTHO05D013603 3.9e-197 692.2 411 84.2
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 2.7e-158 563.1 410 72.0
FAN04G1211 Fragaria x ananassa HOM05D010931 ORTHO05D013603 6.0e-158 562.0 411 71.3
FAN11G4008 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.3e-155 554.3 410 71.2
FAN18G0417 Fragaria x ananassa HOM05D010931 ORTHO05D013603 6.3e-123 445.7 377 64.2
FAN04G3148 Fragaria x ananassa HOM05D010931 ORTHO05D013603 9.8e-116 421.8 334 66.8
FAN04G3014 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.3e-112 411.4 326 66.9
FAN21G3628 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.4e-85 321.6 374 51.3
FAN25G2077 Fragaria x ananassa HOM05D010931 ORTHO05D013603 3.9e-64 250.4 232 59.5
FAN16G2576 Fragaria x ananassa HOM05D010931 ORTHO05D013603 4.9e-51 206.8 299 43.5
FAN02G2364 Fragaria x ananassa HOM05D011252 ORTHO05D029353 9.4e-26 122.9 415 28.9
FAN14G0447 Fragaria x ananassa HOM05D011252 ORTHO05D029353 7.9e-25 119.8 413 27.4
FvH4_6g16960 Fragaria vesca HOM05D011252 ORTHO05D029353 1.4e-24 119.0 413 27.4
FvH4_6g16971 Fragaria vesca HOM05D011252 ORTHO05D029353 1.4e-24 119.0 414 28.3
FAN08G1982 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.4e-21 109.0 62 82.3
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.1e-21 107.5 609 25.8
FAN02G0730 Fragaria x ananassa HOM05D011252 ORTHO05D013603 1.2e-20 105.9 292 31.5
FvH4_6g22212 Fragaria vesca HOM05D010931 ORTHO05D016562 3.2e-18 97.8 234 33.3
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-17 95.5 415 26.0
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 1.8e-16 92.0 322 28.6
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-15 88.2 394 24.4
RcHm_v2.0_Chr3g0476221 Rosa chinensis HOM05D024214 ORTHO05D016562 3.3e-15 87.8 378 28.3
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 7.4e-15 86.7 369 27.4
FvH4_6g22332 Fragaria vesca HOM05D010931 ORTHO05D016562 7.4e-15 86.7 320 29.1
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 7.4e-15 86.7 397 23.9
FAN14G3177 Fragaria x ananassa HOM05D011252 ORTHO05D002975 1.3e-14 85.9 372 25.3
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-14 85.5 267 28.5
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-14 85.5 341 27.0
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 2.2e-14 85.1 369 27.1
FvH4_6g21331 Fragaria vesca HOM05D024214 ORTHO05D016562 3.7e-14 84.3 382 27.5
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-14 84.0 420 27.1
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-14 84.0 421 26.8
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 4.8e-14 84.0 227 31.3
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 6.3e-14 83.6 301 31.6
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-14 83.6 301 31.6
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-14 83.2 218 28.9
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-13 82.0 515 23.5
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-13 80.1 412 23.5
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 2.6e-12 78.2 411 23.8
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-12 77.8 424 22.9
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 7.7e-12 76.6 376 25.3
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-11 76.3 415 26.0
CAN.G137.43 Capsicum annuum HOM05D000151 ORTHO05D000074 1.3e-11 75.9 285 27.7
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.7e-11 75.5 439 23.7
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 3.8e-11 74.3 296 26.0
TWI09G0382 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.1e-10 72.8 410 22.2
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.5e-10 72.4 405 23.2
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-10 72.4 248 27.8
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 1.9e-10 72.0 129 36.4
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-10 71.2 227 28.6
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 5.5e-10 70.5 141 34.0
MBI18_g40419_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 5.5e-10 70.5 202 31.7
FAN05G2214 Fragaria x ananassa HOM05D011252 ORTHO05D016562 7.2e-10 70.1 206 31.1
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.4e-10 69.7 227 28.6
Lj2P486T20 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-09 68.9 310 26.5
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 8.0e-09 66.6 223 24.2
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.0e-09 66.6 236 29.2
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 1.0e-08 66.2 248 24.2
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 5.2e-08 63.9 210 27.6
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.8e-08 63.2 108 37.0
Lj2P518T20 Lonicera japonica HOM05D000151 ORTHO05D000074 8.8e-08 63.2 306 23.5
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 1.2e-07 62.8 245 24.5
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-07 62.8 221 26.2
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-07 62.4 317 20.2
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-07 62.4 425 24.0
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-07 61.2 199 24.6
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-06 59.3 195 28.2
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 1.3e-06 59.3 202 24.8
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 1.7e-06 58.9 233 27.0
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 1.7e-06 58.9 328 26.2
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.2e-06 58.5 78 41.0
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 2.2e-06 58.5 183 29.5
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-06 58.5 78 41.0
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-06 58.5 78 41.0
FAN05G3646 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-06 58.2 178 29.8
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 2.8e-06 58.2 208 25.5
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 3.7e-06 57.8 190 26.8
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-06 57.8 214 27.6
Prupe.2G280300 Prunus persica HOM05D000151 ORTHO05D000074 4.8e-06 57.4 363 24.2
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.3e-06 57.0 194 28.4
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-06 57.0 206 25.2
AUR62006191 Chenopodium quinoa HOM05D001286 ORTHO05D000440 8.2e-06 56.6 194 29.4
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 8.2e-06 56.6 207 29.0


User provided reference genes

Program Settings