Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2886 Fragaria x ananassa HOM05D039766 ORTHO05D000039 1.2e-123 446.4 213 100.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.2e-41 174.1 137 67.2
FvH4_5g15980 Fragaria vesca HOM05D000052 ORTHO05D005847 6.3e-32 141.7 137 59.1
FvH4_5g15943 Fragaria vesca HOM05D000007 ORTHO05D000039 1.5e-25 120.6 156 50.0
FAN18G3857 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-25 120.2 156 50.0
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.3e-24 117.5 139 52.5
FAN24G0616 Fragaria x ananassa HOM05D039766 ORTHO05D046251 3.3e-12 76.3 48 79.2
FvH4_2g06350 Fragaria vesca HOM05D039766 ORTHO05D046251 2.1e-11 73.6 64 62.5
Peaxi162Scf00776g00029 Petunia axillaris HOM05D000007 ORTHO05D000521 6.2e-11 72.0 132 29.5
Nitab4.5_0001774g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.1e-10 71.2 138 28.3
Sopen07g024200 Solanum pennellii HOM05D000007 ORTHO05D000039 1.4e-10 70.9 138 29.7
Dinv42745 Davidia involucrata HOM05D000007 ORTHO05D000039 1.8e-10 70.5 99 38.4
Dinv43356 Davidia involucrata HOM05D000007 ORTHO05D000039 1.8e-10 70.5 99 38.4
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.1e-10 69.7 130 33.8
FAN13G1585 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.0e-10 69.3 130 35.4
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 5.2e-10 68.9 129 34.1
RcHm_v2.0_Chr5g0030031 Rosa chinensis HOM05D000007 ORTHO05D000039 6.8e-10 68.6 137 35.0
Nitab4.5_0001701g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-09 67.0 130 29.2
RcHm_v2.0_Chr6g0284591 Rosa chinensis HOM05D000007 ORTHO05D000039 2.6e-09 66.6 126 38.1
CAN.G1036.10 Capsicum annuum HOM05D000007 ORTHO05D000039 3.4e-09 66.2 129 27.9
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 4.4e-09 65.9 101 36.6
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-09 65.5 130 33.8
RcHm_v2.0_Chr6g0284651 Rosa chinensis HOM05D000007 ORTHO05D000039 7.5e-09 65.1 131 38.2
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 9.8e-09 64.7 121 34.7
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.3e-08 64.3 104 39.4
Hma1.2p1_0036F.1_g023670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-08 64.3 120 35.0
Dinv41267 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-08 63.5 124 32.3
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.7e-08 62.8 104 39.4
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 4.9e-08 62.4 109 36.7
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.9e-08 62.4 104 39.4
Hma1.2p1_2614F.1_g325400 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.9e-08 62.4 103 35.0
Prupe.8G212900 Prunus persica HOM05D000007 ORTHO05D000039 4.9e-08 62.4 130 37.7
Haze_08874 Corylus avellana HOM05D000007 ORTHO05D000017 6.4e-08 62.0 75 40.0
FvH4_5g11821 Fragaria vesca HOM05D000007 ORTHO05D000039 6.4e-08 62.0 102 37.3
Hma1.2p1_1267F.1_g271540 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 8.3e-08 61.6 121 30.6
Migut.F01808 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.1e-07 61.2 94 38.3
Thecc.06G029700 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-07 61.2 121 38.8
FvH4_3g16850 Fragaria vesca HOM05D000007 ORTHO05D000039 1.4e-07 60.8 109 35.8
FAN11G3498 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-07 60.8 109 35.8
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-07 60.5 121 33.9
Thecc.06G029600 Theobroma cacao HOM05D000007 ORTHO05D000039 1.9e-07 60.5 76 44.7
CAN.G456.12 Capsicum annuum HOM05D000007 ORTHO05D000039 2.4e-07 60.1 101 32.7
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-07 59.7 101 34.7
QL08p019850 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-07 59.7 111 36.9
RcHm_v2.0_Chr5g0030021 Rosa chinensis HOM05D000007 ORTHO05D000039 3.2e-07 59.7 148 35.8
vmacro00490 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.2e-07 59.7 102 37.3
QL04p045916 Quercus lobata HOM05D000007 ORTHO05D000039 4.1e-07 59.3 85 36.5
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 4.1e-07 59.3 123 35.0
vmacro09289 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 4.1e-07 59.3 102 35.3
vmacro22920 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 4.1e-07 59.3 102 35.3
Migut.L00223 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.4e-07 58.9 117 35.0
Migut.L00613 Erythranthe guttata HOM05D000007 ORTHO05D000017 7.1e-07 58.5 117 35.0
PSO339G4553 Papaver somniferum HOM05D000007 ORTHO05D000017 7.1e-07 58.5 81 40.7
Lj1P670T34 Lonicera japonica HOM05D000007 ORTHO05D000039 9.2e-07 58.2 96 33.3
PGR083G2034 Punica granatum HOM05D000007 ORTHO05D000017 9.2e-07 58.2 78 44.9
QL11p051041 Quercus lobata HOM05D000007 ORTHO05D000039 9.2e-07 58.2 145 32.4
SalBow3G0227 Salvia bowleyana HOM05D000007 ORTHO05D000017 9.2e-07 58.2 69 50.7
SalBow3G0698 Salvia bowleyana HOM05D000007 ORTHO05D000017 9.2e-07 58.2 69 50.7
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.2e-06 57.8 122 33.6
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-06 57.8 105 37.1
Lj1C664T13 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-06 57.8 104 30.8
PSO384G1360 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 57.8 81 40.7
PSO384G2323 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 57.8 81 40.7
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 1.2e-06 57.8 106 33.0
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 1.2e-06 57.8 119 35.3
EL10Ac2g03691 Beta vulgaris HOM05D000007 ORTHO05D012960 1.6e-06 57.4 96 34.4
FvH4_3g18950 Fragaria vesca HOM05D000007 ORTHO05D000039 1.6e-06 57.4 112 37.5
FAN11G1650 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-06 57.4 123 35.0
FAN11G3242 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-06 57.4 112 37.5
Gohir.D08G025866 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.6e-06 57.4 120 32.5
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-06 57.4 101 32.7
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-06 57.4 101 32.7
vmacro06021 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.6e-06 57.4 121 33.9
Prupe.6G287700 Prunus persica HOM05D000007 ORTHO05D000039 2.1e-06 57.0 151 34.4
QL04p045658 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 57.0 102 36.3
Sc05g0008360 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.1e-06 57.0 86 36.0
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.1e-06 57.0 104 32.7
Cfa000440 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.7e-06 56.6 109 33.0
COL.COLO4_14878 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.7e-06 56.6 110 36.4
Duzib151G0315 Durio zibethinus HOM05D000007 ORTHO05D000017 2.7e-06 56.6 126 31.0
Lj1P673T32 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-06 56.6 96 32.3
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 2.7e-06 56.6 126 34.1
CSS0036577 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.5e-06 56.2 127 33.9
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 3.5e-06 56.2 82 39.0
Manes.09G122100 Manihot esculenta HOM05D000007 ORTHO05D000039 3.5e-06 56.2 111 32.4
Prupe.4G210300 Prunus persica HOM05D000007 ORTHO05D000039 3.5e-06 56.2 154 34.4
Cfa000451 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.6e-06 55.8 112 32.1
Lj3C804T1 Lonicera japonica HOM05D000007 ORTHO05D000017 4.6e-06 55.8 127 30.7
Potri.011G121200 Populus trichocarpa HOM05D000007 ORTHO05D000039 4.6e-06 55.8 116 30.2
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-06 55.8 116 35.3
Rhsim01G0117500 Rhododendron simsii HOM05D000007 ORTHO05D000017 4.6e-06 55.8 77 37.7
RcHm_v2.0_Chr5g0039041 Rosa chinensis HOM05D000007 ORTHO05D000039 4.6e-06 55.8 141 34.8
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.6e-06 55.8 84 33.3
vmacro03638 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.6e-06 55.8 92 33.7
Haze_06983 Corylus avellana HOM05D000007 ORTHO05D000017 6.0e-06 55.5 78 38.5
Haze_06985 Corylus avellana HOM05D021011 ORTHO05D028638 6.0e-06 55.5 78 38.5
Dinv31042 Davidia involucrata HOM05D000007 ORTHO05D000017 6.0e-06 55.5 96 30.2
Dinv31058 Davidia involucrata HOM05D000007 ORTHO05D000017 6.0e-06 55.5 96 30.2
FvH4_3g42380 Fragaria vesca HOM05D000007 ORTHO05D000039 6.0e-06 55.5 128 30.5
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.0e-06 55.5 128 30.5
Gorai.004G021900 Gossypium raimondii HOM05D000007 ORTHO05D000017 6.0e-06 55.5 120 31.7
Hma1.2p1_0178F.1_g078430 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 6.0e-06 55.5 104 36.5
MD15G1089700 Malus domestica HOM05D000007 ORTHO05D000039 6.0e-06 55.5 95 37.9
Manes.07G068800 Manihot esculenta HOM05D000007 ORTHO05D000039 6.0e-06 55.5 102 33.3
Oeu032135.1 Olea europaea HOM05D000007 ORTHO05D000039 6.0e-06 55.5 110 30.9
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 6.0e-06 55.5 109 35.8
Prupe.2G255600 Prunus persica HOM05D000007 ORTHO05D000039 6.0e-06 55.5 114 37.7
Prupe.2G255800 Prunus persica HOM05D000207 ORTHO05D001482 6.0e-06 55.5 114 37.7
RcHm_v2.0_Chr1g0350191 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-06 55.5 147 34.0
RcHm_v2.0_Chr5g0075881 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-06 55.5 111 33.3
COL.COLO4_35211 Corchorus olitorius HOM05D000007 ORTHO05D000039 7.8e-06 55.1 124 34.7
Migut.H02131 Erythranthe guttata HOM05D000007 ORTHO05D000039 7.8e-06 55.1 102 32.4
FvH4_5g35130 Fragaria vesca HOM05D000007 ORTHO05D000039 7.8e-06 55.1 113 37.2
FAN06G1206 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.8e-06 55.1 147 34.0
FAN10G1832 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.8e-06 55.1 147 34.7
FAN10G3302 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.8e-06 55.1 147 34.7
Lju225C0T9 Lonicera japonica HOM05D000007 ORTHO05D000039 7.8e-06 55.1 102 30.4
Manes.10G077179 Manihot esculenta HOM05D000007 ORTHO05D000039 7.8e-06 55.1 83 36.1
PSO017G3058 Papaver somniferum HOM05D000007 ORTHO05D000017 7.8e-06 55.1 91 37.4
PSO832G0242 Papaver somniferum HOM05D000007 ORTHO05D000017 7.8e-06 55.1 86 34.9
Rhsim02G0055500 Rhododendron simsii HOM05D000007 ORTHO05D000017 7.8e-06 55.1 96 37.5
RcHm_v2.0_Chr3g0482251 Rosa chinensis HOM05D000007 ORTHO05D000039 7.8e-06 55.1 73 43.8
TWI32G0895 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.8e-06 55.1 123 31.7


User provided reference genes

Program Settings