Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-227 791.6 399 100.0
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-209 732.6 418 91.4
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.2e-205 717.6 399 92.7
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.4e-204 714.5 399 92.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 6.6e-200 700.7 400 91.5
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.6e-182 642.9 398 85.4
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 2.5e-178 629.0 401 84.5
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-166 589.7 326 92.0
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-154 550.1 357 83.2
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 4.5e-148 528.5 360 73.1
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 4.2e-138 495.4 368 69.8
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.5e-138 495.0 322 75.2
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 2.1e-137 493.0 378 67.5
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.7e-137 492.7 322 74.8
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.6e-137 492.3 322 74.8
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.4e-136 490.3 329 74.2
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.8e-136 490.0 383 64.2
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.2e-135 487.3 330 72.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.2e-135 487.3 332 73.5
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 3.4e-135 485.7 388 65.7
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 9.8e-135 484.2 373 67.8
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.7e-134 482.3 395 65.3
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.1e-133 480.7 320 73.4
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 9.1e-133 477.6 332 70.8
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 2.9e-131 472.6 322 71.7
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 2.9e-131 472.6 392 62.2
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 5.0e-131 471.9 399 61.7
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 3.2e-130 469.2 378 63.8
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 7.2e-130 468.0 323 70.3
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 9.4e-130 467.6 331 69.8
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 9.4e-130 467.6 388 63.9
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.1e-129 466.5 363 64.5
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.1e-129 466.5 374 63.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.3e-128 463.0 393 62.1
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.3e-128 463.0 386 65.3
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 5.2e-128 461.8 356 64.6
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.5e-127 460.3 388 63.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.6e-127 459.5 327 68.5
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.6e-127 459.5 327 68.5
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 7.5e-127 458.0 313 71.6
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.8e-126 456.1 400 60.0
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 8.3e-126 454.5 388 61.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 8.3e-126 454.5 393 59.8
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 2.4e-125 453.0 379 63.9
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 3.1e-125 452.6 337 66.5
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 7.0e-125 451.4 340 65.3
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 7.0e-125 451.4 455 54.7
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 7.0e-125 451.4 419 58.5
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 9.1e-125 451.1 369 62.6
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.0e-124 449.9 340 65.3
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.0e-124 449.9 340 65.3
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 3.5e-124 449.1 340 65.0
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.3e-123 447.2 337 65.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.3e-123 447.2 337 65.3
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.9e-123 446.0 340 64.7
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 6.6e-123 444.9 337 65.0
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 8.6e-123 444.5 351 64.7
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 3.3e-122 442.6 336 65.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-121 440.7 395 66.6
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.2e-121 440.7 337 64.1
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.6e-121 440.3 336 67.3
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.6e-121 440.3 336 67.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.1e-121 439.9 332 66.9
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.1e-121 439.9 336 67.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 3.6e-121 439.1 332 66.3
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 6.1e-121 438.3 407 57.5
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 1.0e-120 437.6 323 66.6
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.0e-120 437.6 339 64.0
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 5.2e-120 435.3 318 69.5
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 8.9e-120 434.5 332 65.7
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 9.8e-119 431.0 385 57.7
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.9e-118 429.5 318 67.0
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 4.1e-117 425.6 319 65.5
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 7.0e-117 424.9 365 60.0
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.3e-115 420.6 319 63.9
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.5e-114 416.4 389 57.1
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 5.6e-114 415.2 387 56.3
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.6e-113 413.7 401 54.9
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 8.0e-113 411.4 310 66.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 4.0e-112 409.1 331 61.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 7.5e-111 404.8 289 68.5
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.3e-110 404.1 332 63.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.3e-110 404.1 289 68.5
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 7.0e-109 398.3 311 64.6
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 3.5e-108 396.0 305 64.6
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 7.8e-108 394.8 338 58.6
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.7e-107 393.7 333 59.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 5.0e-107 392.1 336 58.0
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 2.8e-105 386.3 400 52.5
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 4.7e-105 385.6 349 58.7
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.4e-103 379.4 363 54.8
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 7.3e-98 361.7 333 53.8
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.6e-97 360.5 294 60.9
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.8e-97 359.8 344 57.3
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 9.9e-95 351.3 354 54.2
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 6.4e-94 348.6 300 59.3
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.1e-88 331.3 479 44.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.4e-88 330.9 242 66.5
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.4e-88 330.1 300 57.3
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.2e-84 317.8 385 44.9
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.6e-82 308.1 284 57.7
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 6.9e-80 302.0 379 45.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.5e-74 283.5 321 45.2
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 6.2e-73 278.9 226 64.6
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.4e-69 267.7 319 43.3
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.4e-69 267.7 340 40.3
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 4.2e-69 266.2 194 66.0
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 5.7e-58 229.2 168 66.7
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.0e-54 216.1 214 52.3
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 3.9e-51 206.5 149 65.8
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 4.2e-45 186.4 182 54.4
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.1e-44 184.1 136 65.4
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.6e-44 183.3 200 52.5
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.4e-43 181.4 140 62.1
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 3.1e-40 170.2 187 50.3
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 5.5e-37 159.5 112 68.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.2e-36 158.3 187 46.0
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 6.1e-36 156.0 187 46.5
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 2.2e-30 137.5 206 39.3
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 1.7e-25 121.3 213 32.4
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.1e-24 117.1 126 52.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 5.3e-24 116.3 143 46.2
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 4.4e-18 96.7 215 29.3
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 4.0e-11 73.6 45 71.1
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 4.0e-11 73.6 45 71.1
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 6.3e-09 66.2 31 83.9
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 3.5e-07 60.5 37 70.3


User provided reference genes

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