Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.5e-97 359.0 208 100.0
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.0e-91 339.3 208 95.7
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 3.4e-91 338.6 208 95.7
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.2e-90 335.9 208 95.7
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.1e-88 327.8 208 90.9
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.5e-73 279.3 213 83.6
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.4e-68 263.5 211 80.6
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 1.7e-37 160.2 189 52.9
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 9.2e-36 154.5 196 50.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.6e-35 153.7 196 49.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 2.7e-35 152.9 215 42.8
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 6.0e-35 151.8 198 48.0
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 3.0e-34 149.4 218 44.0
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 5.6e-33 145.2 228 40.8
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 5.6e-33 145.2 216 46.8
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 2.1e-32 143.3 229 48.5
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 6.2e-32 141.7 190 44.2
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 6.2e-32 141.7 190 44.2
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.8e-31 138.3 224 40.2
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 8.9e-31 137.9 189 47.6
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 2.0e-30 136.7 218 38.1
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.4e-30 136.0 228 42.5
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 3.4e-30 136.0 207 43.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 3.4e-30 136.0 201 41.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 5.8e-30 135.2 211 44.5
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 5.8e-30 135.2 232 41.8
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.8e-30 135.2 228 41.7
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.3e-29 134.0 203 44.3
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.7e-29 133.7 200 43.0
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.9e-29 132.9 200 44.5
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.8e-29 132.5 201 41.3
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 6.4e-29 131.7 233 42.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.1e-28 131.0 230 40.0
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.1e-28 131.0 203 45.8
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.4e-28 130.6 207 38.6
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.9e-28 130.2 214 43.5
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 7.1e-28 128.3 242 39.7
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.6e-27 127.1 241 38.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 3.5e-27 125.9 201 46.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 4.6e-27 125.6 173 43.9
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 6.0e-27 125.2 174 43.7
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.0e-26 124.4 188 44.7
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.3e-26 124.0 188 43.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.7e-26 123.6 200 41.0
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.7e-26 123.6 207 42.0
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.1e-26 122.1 225 42.2
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 8.7e-26 121.3 255 38.4
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.1e-25 120.9 229 38.9
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.5e-25 120.6 223 38.6
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 2.5e-25 119.8 201 42.8
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 5.6e-25 118.6 243 42.0
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 9.6e-25 117.9 176 43.2
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 9.6e-25 117.9 205 46.3
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.2e-24 117.5 172 43.0
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-24 117.5 191 39.3
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 3.6e-24 115.9 227 39.2
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 4.7e-24 115.5 160 46.2
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 4.7e-24 115.5 178 42.1
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 6.2e-24 115.2 219 38.8
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.4e-23 114.0 227 38.3
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.9e-23 111.7 223 38.6
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 9.0e-23 111.3 250 35.2
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.2e-22 110.9 173 41.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.6e-22 109.8 218 37.2
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 3.4e-22 109.4 168 43.5
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.3e-21 107.5 213 42.7
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.3e-21 107.5 199 36.7
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.7e-21 107.1 224 37.5
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 4.9e-21 105.5 184 40.8
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 6.4e-21 105.1 184 39.7
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 6.4e-21 105.1 184 39.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 6.4e-21 105.1 220 35.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.9e-20 103.6 192 38.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.2e-20 102.4 224 37.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 5.4e-20 102.1 173 39.3
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.4e-20 102.1 141 45.4
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.6e-19 100.5 216 34.3
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.1e-19 100.1 209 40.2
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.7e-19 99.8 208 35.6
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 4.6e-19 99.0 141 44.0
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.3e-18 97.4 168 39.9
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.7e-18 97.1 214 34.1
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 3.9e-18 95.9 185 37.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 3.9e-18 95.9 185 37.8
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 6.6e-18 95.1 171 40.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 8.7e-18 94.7 171 39.2
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-17 94.4 170 39.4
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.5e-17 94.0 177 36.7
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 4.3e-17 92.4 178 37.6
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 4.3e-17 92.4 179 38.0
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 7.3e-17 91.7 164 40.2
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 9.9e-14 81.3 210 33.3
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.7e-13 80.5 232 30.2
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.2e-13 80.1 191 35.1
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.4e-12 77.4 121 43.0
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 5.4e-12 75.5 189 37.0
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 6.0e-11 72.0 231 28.6
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.3e-10 70.9 152 34.2
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 3.3e-09 66.2 179 30.7
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 4.3e-09 65.9 194 30.4
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 7.4e-09 65.1 174 34.5
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.4e-09 65.1 191 31.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.4e-09 65.1 191 31.9
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.4e-07 60.1 169 33.7
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 6.9e-07 58.5 179 29.6
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 9.9e-06 54.7 49 59.2


User provided reference genes

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