Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 7.9e-100 367.1 182 100.0
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.3e-97 359.8 182 97.8
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 8.2e-97 357.1 182 97.3
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.1e-96 356.7 182 97.8
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.1e-96 354.8 182 96.7
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 3.2e-85 318.5 191 83.8
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 4.2e-69 265.0 192 74.5
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 9.8e-66 253.8 193 71.5
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 3.1e-64 248.8 194 70.6
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.0e-62 243.8 121 95.9
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 6.8e-59 231.1 191 66.0
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 6.8e-59 231.1 183 65.6
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 9.2e-56 220.7 192 63.0
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 7.8e-55 217.6 148 73.6
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 1.0e-54 217.2 176 68.2
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.7e-54 216.5 151 73.5
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.7e-54 216.5 197 61.9
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 6.6e-54 214.5 191 61.8
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 5.6e-53 211.5 193 62.7
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.6e-52 209.9 187 62.6
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 2.1e-52 209.5 188 64.9
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 6.2e-52 208.0 166 68.7
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 8.0e-52 207.6 194 61.3
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 1.0e-51 207.2 190 63.2
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 3.1e-51 205.7 194 60.8
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.1e-51 205.7 166 66.9
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 4.0e-51 205.3 194 60.8
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 4.0e-51 205.3 200 58.5
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 5.2e-51 204.9 137 78.8
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 6.8e-51 204.5 184 63.6
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 1.2e-50 203.8 155 70.3
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 2.6e-50 202.6 190 61.1
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 2.6e-50 202.6 155 70.3
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 4.4e-50 201.8 185 62.2
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 4.4e-50 201.8 154 69.5
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 7.5e-50 201.1 211 55.0
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 9.8e-50 200.7 184 60.9
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 9.8e-50 200.7 155 69.7
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 1.3e-49 200.3 155 69.0
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.7e-49 199.9 192 60.9
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 2.2e-49 199.5 163 66.3
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 2.9e-49 199.1 187 59.9
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 6.4e-49 198.0 177 63.3
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 1.1e-48 197.2 173 63.6
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.2e-48 195.7 172 65.1
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 4.1e-48 195.3 163 65.0
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 4.1e-48 195.3 190 58.9
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 4.1e-48 195.3 164 65.9
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 5.4e-48 194.9 184 58.7
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 5.4e-48 194.9 184 58.7
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-47 193.7 184 62.0
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.6e-47 193.4 193 59.6
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 2.0e-47 193.0 161 67.1
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 2.7e-47 192.6 169 62.1
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 4.6e-47 191.8 173 64.7
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 4.6e-47 191.8 170 62.4
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 6.0e-47 191.4 175 61.7
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 6.0e-47 191.4 131 75.6
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 6.0e-47 191.4 131 75.6
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 1.0e-46 190.7 184 58.2
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 1.3e-46 190.3 192 57.3
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.3e-46 190.3 188 58.0
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 2.3e-46 189.5 191 60.7
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.3e-46 189.5 155 67.1
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 2.3e-46 189.5 170 65.3
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 2.3e-46 189.5 190 56.3
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 3.0e-46 189.1 174 62.1
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 5.0e-46 188.3 132 72.0
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 1.1e-45 187.2 122 80.3
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 1.1e-45 187.2 122 80.3
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 1.5e-45 186.8 123 76.4
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.5e-45 186.8 139 71.9
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 1.9e-45 186.4 190 56.3
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 2.5e-45 186.0 175 60.0
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 4.3e-45 185.3 167 61.7
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 5.6e-45 184.9 162 67.3
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 5.6e-45 184.9 136 72.8
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 5.6e-45 184.9 191 58.6
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 7.3e-45 184.5 203 54.7
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 1.2e-44 183.7 139 69.1
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 1.6e-44 183.3 170 62.4
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 1.1e-43 180.6 158 60.1
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 1.1e-43 180.6 162 64.8
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 1.4e-43 180.3 189 56.6
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 1.8e-43 179.9 175 59.4
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 2.3e-43 179.5 139 71.2
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 3.1e-43 179.1 160 62.5
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 6.8e-43 177.9 187 55.6
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.2e-42 177.2 146 67.8
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 2.6e-42 176.0 167 59.9
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 7.5e-42 174.5 175 59.4
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.3e-41 173.7 176 58.5
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 1.7e-41 173.3 177 57.6
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 4.9e-41 171.8 168 59.5
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 4.9e-41 171.8 109 78.0
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 1.1e-40 170.6 118 72.0
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 1.1e-40 170.6 132 68.9
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 4.1e-40 168.7 139 64.7
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 9.2e-40 167.5 119 70.6
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 1.2e-39 167.2 132 64.4
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 2.1e-39 166.4 127 69.3
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 9.5e-37 157.5 184 53.8
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 4.7e-36 155.2 82 93.9
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 4.7e-36 155.2 106 75.5
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 2.0e-34 149.8 110 70.9
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.0e-34 149.8 158 54.4
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.3e-33 147.1 169 51.5
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 6.4e-33 144.8 109 67.9
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 4.3e-29 132.1 74 86.5
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 8.1e-28 127.9 137 55.5
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 3.1e-27 125.9 99 67.7
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 8.9e-27 124.4 115 61.7
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 3.4e-26 122.5 132 56.1
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.3e-25 120.6 101 68.3
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.7e-25 120.2 69 84.1
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 2.9e-25 119.4 79 70.9
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 6.4e-25 118.2 126 54.0
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 5.6e-21 105.1 69 73.9
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 7.3e-21 104.8 126 50.8
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 1.8e-19 100.1 120 51.7
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 4.5e-18 95.5 56 83.9
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 9.9e-18 94.4 148 45.3
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 6.4e-17 91.7 126 48.4
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 4.6e-15 85.5 65 66.2
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 7.9e-15 84.7 65 66.2
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.3e-12 77.4 100 46.0
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 1.1e-11 74.3 43 79.1
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 1.8e-11 73.6 97 46.4
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 2.4e-11 73.2 59 72.9


User provided reference genes

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