Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2512 Fragaria x ananassa HOM05D004282 ORTHO05D006804 0.0e+00 1082.4 535 100.0
FAN08G1277 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.6e-311 1071.2 535 98.7
FvH4_5g27720 Fragaria vesca HOM05D004282 ORTHO05D006804 2.1e-310 1068.1 535 98.3
FAN18G3468 Fragaria x ananassa HOM05D004282 ORTHO05D006804 1.2e-308 1062.4 542 97.2
FAN04G0421 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.6e-308 1061.2 535 97.8
RcHm_v2.0_Chr7g0219471 Rosa chinensis HOM05D004282 ORTHO05D006804 1.4e-301 1038.9 535 95.3
MD06G1084500 Malus domestica HOM05D004282 ORTHO05D006804 1.7e-283 978.8 535 88.6
MD14G1105600 Malus domestica HOM05D004282 ORTHO05D006804 1.1e-282 976.1 535 88.2
Prupe.5G100800 Prunus persica HOM05D004282 ORTHO05D006804 1.9e-282 975.3 535 89.0
PGR042G2758 Punica granatum HOM05D004282 ORTHO05D006804 5.1e-280 967.2 535 86.9
Eucgr.E00626 Eucalyptus grandis HOM05D004282 ORTHO05D006804 8.1e-278 959.9 535 87.7
QL12p032840 Quercus lobata HOM05D004282 ORTHO05D006804 9.9e-276 953.0 534 86.3
ClCG01G002660 Citrullus lanatus HOM05D004282 ORTHO05D006804 3.8e-275 951.0 535 85.4
MELO3C005680.2 Cucumis melo HOM05D004282 ORTHO05D006804 3.8e-275 951.0 535 85.6
CiPaw.11G134600 Carya illinoinensis HOM05D004282 ORTHO05D006804 1.1e-274 949.5 537 86.4
CsaV3_5G002770 Cucumis sativus L. HOM05D004282 ORTHO05D006804 3.2e-274 948.0 535 85.2
Gorai.003G158400 Gossypium raimondii HOM05D004282 ORTHO05D006804 3.2e-274 948.0 535 85.0
COL.COLO4_34472 Corchorus olitorius HOM05D004282 ORTHO05D006804 4.2e-274 947.6 535 85.6
Gohir.A03G016700 Gossypium hirsutum HOM05D004282 ORTHO05D006804 9.3e-274 946.4 535 84.9
Gohir.D03G151200 Gossypium hirsutum HOM05D004282 ORTHO05D006804 3.5e-273 944.5 535 84.7
Duzib068G0684 Durio zibethinus HOM05D004282 ORTHO05D006804 7.9e-273 943.3 535 84.5
Dinv37635 Davidia involucrata HOM05D004282 ORTHO05D006804 1.0e-272 943.0 535 85.2
Manes.02G019600 Manihot esculenta HOM05D004282 ORTHO05D006804 1.0e-272 943.0 535 84.5
Duzib084G1154 Durio zibethinus HOM05D004282 ORTHO05D006804 1.3e-272 942.6 535 85.0
Potri.003G128200 Populus trichocarpa HOM05D004282 ORTHO05D006804 1.9e-271 938.7 535 84.7
Gohir.D08G201400 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.5e-271 938.3 535 85.0
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea HOM05D004282 ORTHO05D006804 4.3e-271 937.6 535 85.0
Cfa012224 Carpinus fangiana HOM05D004282 ORTHO05D006804 4.3e-271 937.6 537 85.5
Thecc.03G279500 Theobroma cacao HOM05D004282 ORTHO05D006804 7.4e-271 936.8 535 83.9
TWI81G0763 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 6.2e-270 933.7 535 84.3
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea HOM05D004282 ORTHO05D006804 8.1e-270 933.3 535 84.5
TAR374G0019 Trochodendron aralioides HOM05D004282 ORTHO05D006804 8.1e-270 933.3 535 83.2
Lalb_Chr05g0224721 Lupinus albus HOM05D004282 ORTHO05D006804 1.1e-269 932.9 535 84.3
Sabra03G0091200 Salix brachista HOM05D004282 ORTHO05D006804 5.3e-269 930.6 535 84.1
Sed0021454 Sechium edule HOM05D004282 ORTHO05D006804 9.0e-269 929.9 535 83.2
TWI60G0060 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 2.0e-268 928.7 535 84.5
Ca_17527_v3 Cicer arietinum L. HOM05D004282 ORTHO05D006804 2.6e-268 928.3 535 83.6
Aqoxy7G00313 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 3.4e-268 927.9 535 83.2
TPR.G12833 Trifolium pratense HOM05D004282 ORTHO05D006804 3.4e-268 927.9 535 83.6
Lj8A221T67 Lonicera japonica HOM05D004282 ORTHO05D006804 4.5e-268 927.5 536 84.1
Lj4g0008271 Lotus japonicus HOM05D004282 ORTHO05D006804 1.3e-267 926.0 535 83.7
VMungo0251G3615 Vigna mungo HOM05D004282 ORTHO05D006804 1.7e-267 925.6 535 84.1
Actinidia02002 Actinidia chinensis HOM05D004282 ORTHO05D006804 2.9e-267 924.9 535 83.0
TAR375G0364 Trochodendron aralioides HOM05D004282 ORTHO05D006804 4.9e-267 924.1 535 82.6
Sc01g0009620 Simmondsia chinensis HOM05D004282 ORTHO05D006804 6.5e-267 923.7 535 84.1
Rhsim02G0231700 Rhododendron simsii HOM05D004282 ORTHO05D006804 8.4e-267 923.3 536 83.2
Manes.08G013300 Manihot esculenta HOM05D004282 ORTHO05D006804 1.9e-266 922.2 529 84.3
DCAR_006738 Daucus carota HOM05D004282 ORTHO05D006804 2.5e-266 921.8 535 83.2
DCAR_006739 Daucus carota HOM05D004282 ORTHO05D006804 2.5e-266 921.8 535 83.2
HanXRQChr13g0394231 Helianthus annuus HOM05D004282 ORTHO05D006804 2.5e-266 921.8 536 83.0
Glyma.05G208400 Glycine max HOM05D004282 ORTHO05D006804 3.2e-266 921.4 535 83.6
Phvul.002G290100 Phaseolus vulgaris HOM05D004282 ORTHO05D006804 3.2e-266 921.4 535 84.1
Hund14799 Selenicereus undatus HOM05D004282 ORTHO05D006804 9.3e-266 919.8 540 82.4
CANSAT21G1770 Cannabis sativa HOM05D004282 ORTHO05D006804 1.2e-265 919.5 535 83.0
Medtr8g098325 Medicago truncatula HOM05D004282 ORTHO05D006804 3.5e-265 917.9 535 82.2
Lsat_1_v5_gn_3_6581 Lactuca sativa HOM05D004282 ORTHO05D006804 1.3e-264 916.0 536 82.3
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla HOM05D004282 ORTHO05D006804 1.8e-264 915.6 534 83.3
Atru.chr9.2181 Acer truncatum HOM05D004282 ORTHO05D006804 5.1e-264 914.1 529 82.6
Gorai.004G212300 Gossypium raimondii HOM05D004282 ORTHO05D006804 8.7e-264 913.3 535 83.6
Aqoxy2G03117 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 1.1e-263 912.9 536 82.5
Nn6g33428 Nelumbo nucifera HOM05D004282 ORTHO05D006804 1.5e-263 912.5 535 82.2
CSS0007959 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 3.3e-263 911.4 535 82.4
CSS0014359 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 3.3e-263 911.4 535 82.4
Ciclev10019676m.g Citrus clementina HOM05D004282 ORTHO05D006804 4.3e-263 911.0 529 82.4
HanXRQChr06g0165861 Helianthus annuus HOM05D004282 ORTHO05D006804 2.8e-262 908.3 534 82.6
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 1.4e-261 906.0 535 81.5
PGSC0003DMG400012205 Solanum tuberosum HOM05D004282 ORTHO05D006804 1.8e-261 905.6 537 80.8
CARHR047680 Cardamine hirsuta HOM05D004282 ORTHO05D006804 2.4e-261 905.2 535 82.8
Sopen08g029450 Solanum pennellii HOM05D004282 ORTHO05D006804 2.4e-261 905.2 537 80.4
Lsat_1_v5_gn_6_6601 Lactuca sativa HOM05D004282 ORTHO05D006804 3.1e-261 904.8 536 81.9
Solyc08g081150.4 Solanum lycopersicum HOM05D004282 ORTHO05D006804 5.3e-261 904.0 537 80.6
THA.LOC104809396 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 9.0e-261 903.3 535 81.5
DCAR_008399 Daucus carota HOM05D004282 ORTHO05D006804 4.5e-260 901.0 536 82.3
AUR62009455 Chenopodium quinoa HOM05D004282 ORTHO05D006804 5.9e-260 900.6 536 82.3
Sp2g01000 Schrenkiella parvula HOM05D004282 ORTHO05D006804 5.9e-260 900.6 535 82.2
Thhalv10023408m.g Eutrema salsugineum HOM05D004282 ORTHO05D006804 1.7e-259 899.0 535 82.1
AUR62023137 Chenopodium quinoa HOM05D004282 ORTHO05D006804 3.8e-259 897.9 536 81.7
AT1G63660 Arabidopsis thaliana HOM05D004282 ORTHO05D006804 5.0e-259 897.5 535 82.1
EL10Ac2g04411 Beta vulgaris HOM05D004282 ORTHO05D006804 5.0e-259 897.5 536 80.8
THA.LOC104817993 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 5.0e-259 897.5 530 82.1
Carub.0002s0119 Capsella rubella HOM05D004282 ORTHO05D006804 6.5e-259 897.1 535 81.9
C09p18660 Brassica napus HOM05D004282 ORTHO05D006804 8.5e-259 896.7 536 82.3
AL2G11570 Arabidopsis lyrata HOM05D004282 ORTHO05D006804 1.1e-258 896.3 535 82.1
PSO782G4766 Papaver somniferum HOM05D004282 ORTHO05D006804 2.5e-258 895.2 533 80.9
Aa31LG2G870 Aethionema arabicum HOM05D004282 ORTHO05D006804 1.2e-257 892.9 535 80.9
Peaxi162Scf00119g00947 Petunia axillaris HOM05D004282 ORTHO05D006804 1.2e-257 892.9 531 81.5
PSO478G3502 Papaver somniferum HOM05D004282 ORTHO05D006804 1.6e-257 892.5 533 80.3
ECA246G1826 Erigeron canadensis HOM05D004282 ORTHO05D006804 2.1e-257 892.1 537 79.5
Ah.10g038320 Amaranthus hybridus HOM05D004282 ORTHO05D006804 2.7e-257 891.7 536 81.3
CAN.G774.52 Capsicum annuum HOM05D004282 ORTHO05D006804 4.6e-257 891.0 528 80.1
BolC9t54762H Brassica oleracea HOM05D004282 ORTHO05D006804 5.7e-255 884.0 536 81.5
Migut.A00734 Erythranthe guttata HOM05D004282 ORTHO05D006804 1.3e-254 882.9 535 78.1
MSTRG.11981 Avicennia marina HOM05D004282 ORTHO05D006804 2.2e-254 882.1 535 78.9
A09p15390 Brassica napus HOM05D004282 ORTHO05D006804 2.2e-254 882.1 535 81.1
BraA09t37181Z Brassica rapa HOM05D004282 ORTHO05D006804 2.8e-254 881.7 535 80.9
ECA233G0272 Erigeron canadensis HOM05D004282 ORTHO05D006804 3.7e-254 881.3 536 80.2
Cc08_g14800 Coffea canephora HOM05D004282 ORTHO05D006804 8.2e-254 880.2 535 79.1
Nitab4.5_0001615g0080 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.2e-252 876.3 558 77.1
SGA_v2.0_scaffold173G39175 Striga asiatica HOM05D004282 ORTHO05D006804 4.5e-252 874.4 536 77.8
Nitab4.5_0000678g0110 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.0e-251 873.2 558 76.5
Oeu019186.1 Olea europaea HOM05D004282 ORTHO05D006804 2.2e-251 872.1 535 77.2
SHI07141 Sapria himalayana HOM05D004282 ORTHO05D006804 1.4e-250 869.4 529 77.9
Haze_08786 Corylus avellana HOM05D004282 ORTHO05D006804 3.0e-248 861.7 496 85.1
vmacro11363 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 6.7e-248 860.5 682 65.4
MBI17_g24637_MAGBIO Magnolia biondii HOM05D004282 ORTHO05D006804 1.8e-245 852.4 533 79.2
Gohir.A08G182900 Gossypium hirsutum HOM05D004282 ORTHO05D006804 3.1e-245 851.7 493 84.2
Glyma.08G015000 Glycine max HOM05D004282 ORTHO05D006804 4.1e-245 851.3 494 84.0
Os08g0326600 Oryza sativa ssp. japonica HOM05D004282 ORTHO05D006804 1.7e-243 845.9 528 76.1
unitig_578.g16628 Utricularia gibba HOM05D004282 ORTHO05D006804 2.9e-243 845.1 530 76.8
Zm00001eb434370 Zea mays HOM05D004282 ORTHO05D006804 3.0e-240 835.1 528 76.1
GSVIVG01019748001 Vitis vinifera HOM05D004282 ORTHO05D006804 6.3e-238 827.4 535 76.4
vmacro22817 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 8.2e-238 827.0 666 64.9
Oeu009150.1 Olea europaea HOM05D004282 ORTHO05D006804 8.2e-230 800.4 539 72.4
ATR1101G056 Amborella trichopoda HOM05D004282 ORTHO05D006804 2.9e-227 792.0 559 69.2
AagrBONN_evm.TU.Sc2ySwM_344.3490 Anthoceros agrestis HOM05D004282 ORTHO05D006804 6.3e-222 774.2 525 69.7
Pp3c8_7320 Physcomitrium patens HOM05D004282 ORTHO05D006804 5.9e-220 767.7 531 67.8
Lj2A0T39 Lonicera japonica HOM05D004282 ORTHO05D006804 1.6e-217 759.6 536 72.8
Mapoly0002s0326 Marchantia polymorpha HOM05D004282 ORTHO05D006804 2.8e-217 758.8 530 68.3
CBR_g48399 Chara braunii HOM05D004282 ORTHO05D006804 2.3e-216 755.7 526 68.6
Lj2A185G23 Lonicera japonica HOM05D004282 ORTHO05D006804 6.1e-209 731.1 441 81.2
SMO116G0368 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 6.1e-209 731.1 535 65.0
MCO08G312 Micromonas commoda HOM05D004282 ORTHO05D006804 3.2e-205 718.8 531 63.8
CDE06G0245 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 2.2e-198 696.0 404 80.9
Cre02.g092900 Chlamydomonas reinhardtii HOM05D004282 ORTHO05D006804 1.4e-197 693.3 527 63.4
PRCOL_00000667 Prasinoderma coloniale HOM05D004282 ORTHO05D006804 3.5e-196 688.7 525 63.4
BcaNung07334 Brassica carinata HOM05D004282 ORTHO05D006804 4.1e-189 665.2 374 85.8
HPP92_014989 Vanilla planifolia HOM05D004282 ORTHO05D006804 1.6e-188 663.3 497 65.6
CDE06G1269 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 3.4e-183 645.6 496 67.3
CiPaw.12G092600 Carya illinoinensis HOM05D004282 ORTHO05D006804 6.2e-169 598.2 422 71.1
Sabra01G0078200 Salix brachista HOM05D004282 ORTHO05D006804 2.1e-161 573.2 712 49.7
Cpa.g.c40776 Carica papaya HOM05D004282 ORTHO05D006804 5.0e-142 508.8 299 81.9
Cfa023610 Carpinus fangiana HOM05D004282 ORTHO05D006804 1.8e-131 473.8 537 50.5
SEGI_10668 Sequoiadendron giganteum HOM05D004282 ORTHO05D006804 1.9e-125 453.8 312 71.8
SMO165G0029 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 2.4e-120 436.8 537 47.5
Pp3c3_31480 Physcomitrium patens HOM05D004282 ORTHO05D006804 1.2e-100 371.3 411 49.6
CDE02G0075 Ceratophyllum demersum HOM05D004282 ORTHO05D021217 3.0e-99 366.7 262 69.1
Cpa.g.sc74.54 Carica papaya HOM05D004282 ORTHO05D022242 3.7e-81 306.6 184 80.4
Actinidia14566 Actinidia chinensis HOM05D004282 ORTHO05D017169 2.2e-65 254.2 148 81.8
ECA233G3991 Erigeron canadensis HOM05D004282 ORTHO05D006804 2.5e-61 240.7 148 77.0
CDE02G2749 Ceratophyllum demersum HOM05D004282 ORTHO05D022242 6.0e-47 193.0 140 67.9
ATR0680G380 Amborella trichopoda HOM05D004282 ORTHO05D006804 3.5e-39 167.2 173 50.3
QL09p052209 Quercus lobata HOM05D004282 ORTHO05D022242 2.3e-38 164.5 104 78.8
GSVIVG01010145001 Vitis vinifera HOM05D004282 ORTHO05D021217 8.7e-38 162.5 94 80.9
CANSAT64G0187 Cannabis sativa HOM05D004282 ORTHO05D006804 1.1e-35 155.6 103 75.7
ATR0680G421 Amborella trichopoda HOM05D004282 ORTHO05D021217 3.1e-35 154.1 109 71.6
TAR633G2425 Trochodendron aralioides HOM05D004282 ORTHO05D022242 6.3e-20 103.2 93 62.4
TAR633G2043 Trochodendron aralioides HOM05D004282 ORTHO05D006540 1.5e-18 98.6 119 47.9
RcHm_v2.0_Chr1g0356411 Rosa chinensis HOM05D004282 ORTHO05D341678 2.3e-14 84.7 58 75.9
RcHm_v2.0_Chr1g0321151 Rosa chinensis HOM05D004282 ORTHO05D022242 6.7e-14 83.2 48 89.6
RcHm_v2.0_Chr7g0219111 Rosa chinensis HOM05D004282 ORTHO05D022242 1.1e-13 82.4 78 66.7
Cc06_g21260 Coffea canephora HOM05D004282 ORTHO05D017169 1.7e-12 78.6 46 78.3
VMungo0464G0647 Vigna mungo HOM05D004282 ORTHO05D021217 1.8e-11 75.1 44 79.5
VMungo0540G0566 Vigna mungo HOM05D004282 ORTHO05D021217 1.8e-11 75.1 44 79.5
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 2.4e-11 74.7 45 75.6
SGA_v2.0_scaffold43G16453 Striga asiatica HOM05D004282 ORTHO05D404191 6.1e-07 60.1 41 65.9
Ca_07210_v3 Cicer arietinum L. HOM05D004282 ORTHO05D147921 3.0e-06 57.8 65 43.1


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