Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.2e-86 323.2 165 100.0
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 3.1e-58 228.8 184 71.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.2e-54 216.9 198 63.6
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 2.3e-50 202.6 175 65.7
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.4e-47 192.6 170 64.7
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 3.2e-47 192.2 175 63.4
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.2e-46 190.3 175 61.1
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 4.7e-43 178.3 175 56.6
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 4.0e-42 175.3 174 55.2
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 1.5e-41 173.3 174 56.9
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 1.7e-40 169.9 178 55.6
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.2e-40 169.5 173 54.3
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.9e-40 169.1 177 53.1
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 4.9e-40 168.3 174 53.4
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 1.1e-39 167.2 173 56.6
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 1.9e-39 166.4 174 52.3
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 2.4e-39 166.0 172 51.7
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 2.4e-39 166.0 173 52.6
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 4.1e-39 165.2 170 54.1
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 7.1e-39 164.5 171 52.0
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 7.1e-39 164.5 170 52.9
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 7.1e-39 164.5 174 52.3
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 9.2e-39 164.1 173 54.3
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.7e-38 162.5 173 52.6
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.7e-38 162.5 168 54.8
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 3.5e-38 162.2 173 52.0
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 3.5e-38 162.2 174 52.3
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 3.5e-38 162.2 174 51.7
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 3.5e-38 162.2 174 51.1
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 4.6e-38 161.8 173 53.2
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 4.6e-38 161.8 173 51.4
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 4.6e-38 161.8 173 52.6
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 6.0e-38 161.4 173 50.9
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 6.0e-38 161.4 246 43.1
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 7.8e-38 161.0 171 50.9
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 7.8e-38 161.0 171 50.9
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 1.0e-37 160.6 173 51.4
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 1.0e-37 160.6 173 50.9
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.3e-37 160.2 173 50.9
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.3e-37 160.2 173 50.9
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.3e-37 160.2 173 49.7
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.3e-37 160.2 172 52.3
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 2.3e-37 159.5 172 51.7
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 2.3e-37 159.5 171 52.0
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 3.0e-37 159.1 172 51.2
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.0e-37 159.1 169 52.1
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 3.9e-37 158.7 170 50.6
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 5.1e-37 158.3 171 51.5
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 1.1e-36 157.1 172 51.2
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.5e-36 156.8 170 50.0
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.5e-36 156.8 170 51.8
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 2.5e-36 156.0 171 50.9
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 3.3e-36 155.6 175 49.7
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.3e-36 155.6 171 50.3
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.6e-36 154.8 171 50.3
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 5.6e-36 154.8 171 50.3
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 7.3e-36 154.5 169 50.3
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 1.2e-35 153.7 171 50.9
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 1.2e-35 153.7 171 49.7
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.2e-35 153.7 189 47.6
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 1.6e-35 153.3 175 49.7
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 1.6e-35 153.3 171 49.7
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 2.1e-35 152.9 173 50.9
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 3.6e-35 152.1 175 50.3
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 4.7e-35 151.8 171 50.3
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 4.7e-35 151.8 171 49.1
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 1.4e-34 150.2 172 50.6
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 1.4e-34 150.2 170 50.0
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 1.8e-34 149.8 171 48.5
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 4.0e-34 148.7 175 49.1
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 6.9e-34 147.9 175 48.6
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.0e-33 146.4 175 48.6
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 2.6e-33 146.0 181 48.1
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 3.4e-33 145.6 172 46.5
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 3.4e-33 145.6 170 49.4
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 9.9e-33 144.1 172 48.8
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 2.9e-32 142.5 181 47.0
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 2.9e-32 142.5 181 47.0
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 3.8e-32 142.1 169 46.2
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 1.1e-31 140.6 172 45.3
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 1.4e-31 140.2 170 48.8
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 1.6e-30 136.7 174 44.8
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 2.1e-30 136.3 170 45.3
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 3.5e-30 135.6 168 47.0
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 3.5e-30 135.6 155 49.0
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 4.6e-30 135.2 172 45.9
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 2.3e-29 132.9 169 45.6
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 3.9e-29 132.1 171 45.0
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 6.6e-29 131.3 191 43.5
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 6.6e-29 131.3 171 45.0
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 9.6e-28 127.5 169 42.6
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.3e-27 127.1 173 45.7
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 2.8e-27 125.9 184 41.3
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 6.2e-27 124.8 200 39.0
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 5.3e-26 121.7 140 49.3
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 7.6e-25 117.9 138 46.4
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 2.2e-24 116.3 172 40.1
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 1.1e-23 114.0 177 40.7
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 1.9e-23 113.2 171 42.7
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 4.2e-23 112.1 140 47.1
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 4.2e-23 112.1 147 44.9
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 1.2e-22 110.5 138 44.9
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.5e-22 109.0 142 45.8
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 7.9e-22 107.8 127 47.2
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.8e-21 106.7 173 41.6
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 5.1e-21 105.1 74 68.9
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 7.4e-20 101.3 81 64.2
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.8e-19 99.4 206 35.4
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 2.4e-18 96.3 61 72.1
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 5.3e-18 95.1 76 64.5
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 9.0e-18 94.4 82 62.2
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 9.0e-18 94.4 82 62.2
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.0e-17 93.2 150 40.7
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 3.4e-17 92.4 82 61.0
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.2e-16 89.7 82 61.0
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.1e-15 87.4 55 74.5
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 2.4e-15 86.3 58 67.2
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 4.2e-15 85.5 59 67.8
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 5.5e-15 85.1 59 66.1
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 6.7e-13 78.2 132 36.4
RcHm_v2.0_Chr4g0394581 Rosa chinensis HOM05D004344 ORTHO05D006026 4.0e-10 68.9 54 64.8
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 4.5e-09 65.5 55 50.9
SEGI_00674 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 1.2e-06 57.4 51 51.0


User provided reference genes

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