Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 7.1e-98 360.5 173 100.0
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 8.6e-96 353.6 172 98.3
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 8.6e-96 353.6 172 98.3
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.5e-95 352.8 173 98.3
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 5.2e-93 344.4 173 94.8
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.1e-89 332.4 164 97.6
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 4.7e-86 321.2 173 85.5
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 1.1e-85 320.1 172 86.6
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 1.1e-85 320.1 173 86.1
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 3.5e-81 305.1 167 85.0
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 6.0e-81 304.3 171 81.3
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.7e-80 302.8 171 80.7
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 1.7e-80 302.8 171 80.7
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.9e-80 301.6 171 80.1
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 8.7e-80 300.4 169 80.5
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 8.7e-80 300.4 172 79.1
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.1e-79 300.1 171 79.5
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 1.1e-79 300.1 171 77.8
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 1.5e-79 299.7 171 80.7
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 1.9e-79 299.3 171 78.4
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 2.5e-79 298.9 166 83.1
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 2.5e-79 298.9 171 78.9
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 3.3e-79 298.5 171 80.1
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 4.3e-79 298.1 172 78.5
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 4.3e-79 298.1 171 78.9
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 4.3e-79 298.1 172 79.1
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 5.6e-79 297.7 166 82.5
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 5.6e-79 297.7 171 77.8
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 7.3e-79 297.4 172 77.9
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 9.6e-79 297.0 171 78.9
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 9.6e-79 297.0 168 80.4
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 2.1e-78 295.8 166 82.5
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 2.8e-78 295.4 169 79.9
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 2.8e-78 295.4 171 80.1
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 3.6e-78 295.0 168 78.6
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 6.2e-78 294.3 171 77.2
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 8.1e-78 293.9 172 77.9
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 8.1e-78 293.9 166 80.1
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 8.1e-78 293.9 171 77.8
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 8.1e-78 293.9 169 78.7
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 1.4e-77 293.1 168 78.6
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 1.4e-77 293.1 166 81.9
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 1.8e-77 292.7 172 76.2
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 2.4e-77 292.4 166 80.1
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 2.4e-77 292.4 169 78.1
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 3.1e-77 292.0 173 75.7
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 3.1e-77 292.0 173 75.7
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 3.1e-77 292.0 172 76.7
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 3.1e-77 292.0 168 76.8
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.1e-77 292.0 169 77.5
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 4.0e-77 291.6 169 75.7
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 4.0e-77 291.6 171 77.8
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 4.0e-77 291.6 166 80.7
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 4.0e-77 291.6 166 79.5
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 6.9e-77 290.8 166 79.5
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 6.9e-77 290.8 168 77.4
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 1.2e-76 290.0 166 80.1
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 1.5e-76 289.7 166 80.1
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.5e-76 289.7 172 77.3
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.5e-76 289.7 172 77.3
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 2.6e-76 288.9 166 78.3
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 4.4e-76 288.1 167 77.8
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 4.4e-76 288.1 167 77.8
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 4.4e-76 288.1 168 77.4
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 4.4e-76 288.1 169 76.3
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 9.9e-76 287.0 166 77.7
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 2.2e-75 285.8 166 76.5
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 2.9e-75 285.4 166 78.9
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 2.9e-75 285.4 169 74.0
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 3.8e-75 285.0 171 75.4
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 4.9e-75 284.6 166 74.7
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 6.4e-75 284.3 168 76.2
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 6.4e-75 284.3 166 78.3
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 6.4e-75 284.3 168 75.0
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 1.1e-74 283.5 166 78.3
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 1.4e-74 283.1 168 76.8
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 1.4e-74 283.1 169 74.6
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 1.9e-74 282.7 168 74.4
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 1.9e-74 282.7 166 77.7
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 2.4e-74 282.3 166 74.1
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 3.2e-74 282.0 182 73.6
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 3.2e-74 282.0 168 73.8
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 5.4e-74 281.2 171 71.9
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 1.2e-73 280.0 159 77.4
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 1.6e-73 279.6 168 73.8
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 2.1e-73 279.3 171 72.5
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 2.1e-73 279.3 166 78.9
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 1.0e-72 276.9 171 72.5
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 1.0e-72 276.9 169 74.6
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 2.3e-72 275.8 168 72.6
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 5.1e-72 274.6 168 73.8
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 6.6e-72 274.2 168 70.8
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 6.6e-72 274.2 201 64.2
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 6.6e-72 274.2 167 76.0
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.1e-71 273.5 166 71.1
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 2.5e-71 272.3 168 70.8
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 9.6e-71 270.4 162 75.3
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 168 71.4
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 1.3e-70 270.0 168 72.0
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 1.6e-70 269.6 171 69.6
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 2.1e-70 269.2 168 71.4
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 2.1e-70 269.2 168 70.2
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 2.1e-70 269.2 168 70.2
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 3.6e-70 268.5 166 72.3
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 4.8e-70 268.1 168 70.2
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 4.8e-70 268.1 168 70.2
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 4.8e-70 268.1 154 79.2
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 6.2e-70 267.7 168 72.6
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 1.8e-69 266.2 166 72.3
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 1.2e-68 263.5 168 69.0
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 2.0e-68 262.7 170 68.8
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 4.5e-68 261.5 168 68.5
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 9.9e-68 260.4 229 56.3
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 2.2e-67 259.2 156 75.6
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 2.9e-67 258.8 168 69.0
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 8.4e-67 257.3 168 68.5
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.1e-66 256.9 168 67.9
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 1.4e-66 256.5 168 67.3
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.4e-66 255.8 158 74.1
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 4.2e-66 255.0 158 74.1
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 4.2e-66 255.0 158 74.1
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 4.2e-66 255.0 158 74.1
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 7.1e-66 254.2 169 66.9
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 1.6e-65 253.1 164 67.7
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 7.4e-63 244.2 150 74.0
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 1.6e-62 243.0 174 66.1
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 5.3e-61 238.0 166 65.7
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 4.5e-60 235.0 167 62.9
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 5.8e-60 234.6 174 62.1
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 8.4e-59 230.7 168 66.1
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 8.4e-59 230.7 171 60.2
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 2.5e-58 229.2 160 63.8
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 4.2e-58 228.4 164 59.8
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 1.6e-57 226.5 166 62.7
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 5.8e-52 208.0 167 55.1
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 3.0e-48 195.7 122 74.6
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 3.9e-48 195.3 108 79.6
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-47 192.6 157 59.9
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 1.4e-45 186.8 175 50.9
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 2.6e-44 182.6 110 75.5
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.4e-42 176.8 111 71.2
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 3.2e-42 175.6 166 54.2
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 9.4e-42 174.1 101 76.2
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 3.0e-40 169.1 104 72.1
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 6.7e-40 167.9 101 75.2
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 2.0e-39 166.4 170 54.7
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 3.7e-38 162.2 104 69.2
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 4.8e-38 161.8 108 66.7
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-37 159.8 108 65.7
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-37 159.8 108 65.7
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.5e-34 149.4 85 78.8
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 1.0e-32 144.1 176 47.2
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 2.4e-29 132.9 165 38.8
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-26 123.2 72 73.6
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 9.4e-26 120.9 137 51.1
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 5.7e-23 111.7 121 49.6
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 8.5e-19 97.8 183 30.1
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.1e-18 97.4 63 65.1
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 1.6e-17 93.6 61 70.5
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 1.5e-15 87.0 79 53.2
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.4e-13 79.7 60 56.7
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.0e-11 74.3 60 55.0
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 1.3e-11 73.9 35 88.6
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.2e-11 73.2 61 57.4
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 5.7e-07 58.5 48 58.3


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