Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.6e-208 729.2 366 100.0
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.2e-201 704.5 370 96.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.6e-200 701.4 370 96.2
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.8e-196 689.1 366 95.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.9e-161 572.8 358 79.6
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 8.0e-160 567.4 319 90.6
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 1.3e-154 550.1 362 76.0
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 4.7e-152 541.6 358 78.2
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.7e-149 533.1 361 73.4
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 7.1e-148 527.7 367 71.1
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.5e-145 520.0 364 70.6
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.5e-145 520.0 353 73.4
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 4.3e-145 518.5 364 70.3
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 4.3e-145 518.5 359 72.4
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 2.1e-144 516.2 364 71.4
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.1e-143 513.8 357 70.0
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.3e-143 512.7 359 72.1
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 5.2e-143 511.5 355 71.0
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 2.0e-142 509.6 348 74.1
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-142 509.6 357 71.1
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-142 509.6 357 71.1
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-142 509.6 357 71.1
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.8e-142 508.1 389 66.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.7e-141 506.5 367 68.7
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 2.9e-141 505.8 368 69.3
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 4.9e-141 505.0 354 71.2
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.1e-140 503.8 353 71.1
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 9.2e-140 500.7 356 68.8
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 9.2e-140 500.7 353 70.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.6e-139 500.0 348 72.7
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.5e-139 498.8 353 70.3
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.0e-139 498.0 361 69.0
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 7.8e-139 497.7 355 68.7
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.3e-138 496.9 363 67.8
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 2.3e-138 496.1 355 69.0
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.3e-138 496.1 351 70.1
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 5.1e-138 495.0 348 72.4
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 8.6e-138 494.2 363 68.3
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.5e-137 493.4 368 67.1
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 5.6e-137 491.5 352 70.7
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 7.3e-137 491.1 355 67.0
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.1e-135 487.3 353 68.0
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.4e-135 486.9 361 68.1
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.1e-135 485.7 357 66.1
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 4.0e-135 485.3 355 67.9
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 6.8e-135 484.6 350 67.1
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.5e-134 483.4 349 69.3
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.6e-134 482.6 348 69.8
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.4e-134 482.3 356 67.1
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 7.6e-134 481.1 355 67.3
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.7e-133 479.9 350 68.0
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.2e-131 473.8 352 67.0
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 2.1e-131 473.0 350 66.3
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 3.5e-131 472.2 352 66.5
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.0e-130 470.7 352 66.2
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.3e-130 470.3 361 65.4
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 3.9e-130 468.8 354 64.7
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 2.5e-129 466.1 356 67.7
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.6e-128 463.4 319 72.7
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.8e-128 461.8 350 65.4
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 4.8e-128 461.8 353 66.0
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.1e-127 460.7 350 66.0
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.4e-127 460.3 392 61.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.0e-127 458.8 410 58.5
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-126 457.2 319 71.8
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.2e-126 457.2 354 64.7
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 2.0e-126 456.4 349 64.2
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 4.4e-126 455.3 353 63.5
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.2e-125 453.0 357 65.5
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 6.0e-123 444.9 319 70.5
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 3.0e-122 442.6 349 63.6
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 9.6e-121 437.6 363 61.4
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.7e-117 426.8 314 69.1
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 8.4e-117 424.5 350 59.4
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 4.6e-115 418.7 359 57.4
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 7.9e-115 417.9 323 65.0
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.0e-114 417.5 353 60.3
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.3e-114 417.2 346 59.0
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.1e-112 409.8 295 70.8
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.4e-110 402.5 349 60.2
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 3.3e-97 359.4 240 75.0
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 7.7e-94 348.2 231 73.6
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 3.2e-92 342.8 351 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.3e-90 336.7 332 51.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.3e-90 336.7 349 53.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.1e-89 334.3 344 47.4
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 6.3e-88 328.6 329 51.7
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.4e-84 317.4 335 48.4
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 2.4e-71 273.5 203 67.5
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.6e-70 270.8 297 50.8
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.7e-62 243.4 485 33.6
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.0e-61 241.5 172 67.4
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.0e-58 229.6 182 63.2
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-38 164.1 165 52.1
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 7.8e-38 162.2 131 61.8
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 7.8e-38 162.2 131 61.8
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.5e-30 136.7 158 46.8
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 8.6e-29 132.1 257 35.8
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.9e-21 106.7 91 53.8
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 3.1e-18 97.1 91 45.1
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.6e-17 94.0 88 45.5
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 4.9e-16 89.7 74 66.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 2.8e-11 73.9 53 69.8
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 3.5e-06 57.0 46 58.7


User provided reference genes

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