Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 6.1e-95 350.9 189 100.0
FvH4_5g14530 Fragaria vesca HOM05D008369 ORTHO05D005932 3.5e-90 335.1 189 94.7
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 7.7e-90 334.0 189 96.3
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.9e-88 329.3 189 88.4
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 1.6e-63 246.5 187 75.4
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 2.5e-40 169.5 206 54.9
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 6.2e-39 164.9 205 55.6
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 2.3e-33 146.4 204 52.0
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 5.8e-21 105.1 190 37.9
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 6.4e-20 101.7 213 42.7
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 8.4e-20 101.3 203 37.4
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 1.9e-19 100.1 199 38.2
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 6.0e-18 95.1 203 36.0
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 1.8e-17 93.6 216 35.2
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 3.9e-17 92.4 188 37.8
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 1.1e-16 90.9 174 39.1
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 2.5e-16 89.7 191 33.0
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 4.3e-16 89.0 175 38.3
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 4.3e-16 89.0 193 36.3
Gorai.007G038200 Gossypium raimondii HOM05D008369 ORTHO05D005932 2.1e-15 86.7 176 41.5
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 4.0e-14 82.4 180 35.6
Actinidia04866 Actinidia chinensis HOM05D008369 ORTHO05D005932 5.3e-14 82.0 175 35.4
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 6.9e-14 81.6 211 36.0
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 1.5e-13 80.5 180 37.2
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 3.4e-13 79.3 185 38.9
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 2.2e-12 76.6 212 36.3
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 4.9e-12 75.5 180 35.6
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 1.1e-11 74.3 205 31.2
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea HOM05D008369 ORTHO05D005932 1.9e-11 73.6 174 39.7
Lj4g0010683 Lotus japonicus HOM05D008369 ORTHO05D005932 3.2e-11 72.8 183 38.3
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 4.2e-11 72.4 167 34.7
PGR044G0243 Punica granatum HOM05D008369 ORTHO05D005932 7.1e-11 71.6 217 30.0
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 1.2e-10 70.9 182 39.6
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 1.6e-10 70.5 231 30.3
Psat4g049480 Pisum sativum HOM05D008369 ORTHO05D005932 1.6e-10 70.5 186 38.7
TPR.G2001 Trifolium pratense HOM05D008369 ORTHO05D005932 3.5e-10 69.3 181 33.1
CsaV3_1G005690 Cucumis sativus L. HOM05D008369 ORTHO05D005932 6.1e-10 68.6 192 39.1
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 7.9e-10 68.2 180 36.1
ClCG04G012080 Citrullus lanatus HOM05D008369 ORTHO05D005932 1.0e-09 67.8 169 38.5
MELO3C002000.2 Cucumis melo HOM05D008369 ORTHO05D005932 2.3e-09 66.6 186 39.2
CANSAT80G1936 Cannabis sativa HOM05D008369 ORTHO05D005932 1.5e-08 63.9 204 34.8
Ciclev10032785m.g Citrus clementina HOM05D009095 ORTHO05D005932 2.5e-08 63.2 201 29.4
DCAR_026037 Daucus carota HOM05D008369 ORTHO05D005932 2.5e-08 63.2 152 34.9
Glyma.05G024700 Glycine max HOM05D008369 ORTHO05D005932 2.5e-08 63.2 151 31.1
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 3.3e-08 62.8 235 29.4
Hund09825 Selenicereus undatus HOM05D008369 ORTHO05D005932 3.3e-08 62.8 154 33.8
Phvul.003G188100 Phaseolus vulgaris HOM05D008369 ORTHO05D005932 7.4e-08 61.6 150 31.3
Dinv34096 Davidia involucrata HOM05D009095 ORTHO05D005932 9.7e-08 61.2 191 32.5
Migut.L01243 Erythranthe guttata HOM05D009095 ORTHO05D005932 9.7e-08 61.2 188 30.3
VMungo1215G3129 Vigna mungo HOM05D008369 ORTHO05D005932 9.7e-08 61.2 163 30.7
vmacro17570 Vaccinium macrocarpon HOM05D008369 ORTHO05D005932 1.3e-07 60.8 159 32.1
TWI56G0627 Tripterygium wilfordii HOM05D009095 ORTHO05D005932 1.6e-07 60.5 194 29.4
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 4.8e-07 58.9 168 31.0
Thecc.02G339500 Theobroma cacao HOM05D009095 ORTHO05D005932 6.3e-07 58.5 211 30.3
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 1.1e-06 57.8 226 30.1
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 1.4e-06 57.4 168 31.0
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 1.8e-06 57.0 219 32.0
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 2.4e-06 56.6 194 37.1
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.1e-06 56.2 168 30.4
Lsat_1_v5_gn_1_14361 Lactuca sativa HOM05D008369 ORTHO05D005932 4.1e-06 55.8 187 25.7
Glyma.17G102500 Glycine max HOM05D008369 ORTHO05D005932 5.3e-06 55.5 153 30.1
Manes.05G106200 Manihot esculenta HOM05D009095 ORTHO05D005932 5.3e-06 55.5 199 29.6
Ah.02g113780 Amaranthus hybridus HOM05D008369 ORTHO05D005932 9.0e-06 54.7 183 27.9


User provided reference genes

Program Settings