Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 1.5e-54 216.1 119 100.0
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 7.3e-54 213.8 119 99.2
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.3e-54 213.8 119 99.2
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 1.5e-46 189.5 119 89.9
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 2.9e-42 175.3 127 81.9
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 9.3e-41 170.2 119 82.4
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 1.6e-40 169.5 119 82.4
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 1.1e-38 163.3 119 79.0
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 3.3e-38 161.8 119 74.8
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 4.3e-38 161.4 119 73.9
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 1.4e-36 156.4 115 76.5
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 2.0e-35 152.5 120 75.0
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 2.6e-35 152.1 121 74.4
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 3.4e-35 151.8 119 70.6
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 7.6e-35 150.6 119 71.4
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.6e-35 150.6 120 71.7
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 1.3e-34 149.8 120 70.8
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 2.9e-34 148.7 115 70.4
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 8.4e-34 147.1 115 72.2
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 8.4e-34 147.1 118 67.8
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 8.4e-34 147.1 120 70.0
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 5.5e-33 144.4 119 71.4
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 7.1e-33 144.1 120 70.0
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 9.3e-33 143.7 120 68.3
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 9.3e-33 143.7 119 68.9
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 2.7e-32 142.1 120 68.3
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 2.7e-32 142.1 121 70.2
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 4.6e-32 141.4 117 65.0
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 1.0e-31 140.2 121 66.9
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.0e-31 140.2 120 70.0
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 2.3e-31 139.0 120 70.0
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 2.3e-31 139.0 121 69.4
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 5.1e-31 137.9 85 89.4
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 8.7e-31 137.1 128 64.8
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 8.7e-31 137.1 120 65.8
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 1.9e-30 136.0 120 66.7
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 1.9e-30 136.0 120 66.7
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 1.9e-30 136.0 122 67.2
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 2.5e-30 135.6 115 69.6
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 2.5e-30 135.6 121 67.8
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 2.5e-30 135.6 121 66.9
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 3.3e-30 135.2 121 66.9
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 3.3e-30 135.2 121 66.9
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 4.3e-30 134.8 120 65.8
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 4.3e-30 134.8 119 63.9
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 9.6e-30 133.7 116 69.0
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 9.6e-30 133.7 121 68.6
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 2.1e-29 132.5 115 65.2
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 2.1e-29 132.5 121 62.8
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 2.8e-29 132.1 122 65.6
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 2.8e-29 132.1 120 65.0
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 3.7e-29 131.7 121 66.9
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 1.1e-28 130.2 121 64.5
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 1.4e-28 129.8 120 63.3
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 1.4e-28 129.8 120 65.0
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 2.4e-28 129.0 122 62.3
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 2.4e-28 129.0 120 63.3
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.1e-28 128.6 116 64.7
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 4.1e-28 128.3 122 63.9
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 4.1e-28 128.3 116 62.9
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 5.3e-28 127.9 123 64.2
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 6.9e-28 127.5 116 63.8
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 6.9e-28 127.5 117 64.1
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 9.0e-28 127.1 120 63.3
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 9.0e-28 127.1 120 64.2
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 9.0e-28 127.1 111 66.7
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 1.5e-27 126.3 120 64.2
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.5e-27 126.3 122 63.1
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 2.6e-27 125.6 117 65.0
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 4.5e-27 124.8 109 66.1
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 5.8e-27 124.4 120 60.0
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 5.8e-27 124.4 120 60.0
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 5.8e-27 124.4 115 60.0
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 7.6e-27 124.0 120 64.2
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 6.5e-26 120.9 105 66.7
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 1.4e-25 119.8 121 60.3
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 2.5e-25 119.0 120 60.0
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 2.5e-25 119.0 121 59.5
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 1.6e-24 116.3 115 57.4
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 2.1e-24 115.9 121 60.3
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 3.5e-24 115.2 121 59.5
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 3.5e-24 115.2 113 61.1
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 7.9e-24 114.0 122 59.8
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 3.0e-23 112.1 125 59.2
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 3.9e-23 111.7 78 85.9
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 5.1e-23 111.3 120 57.5
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 5.7e-22 107.8 112 58.9
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 9.7e-22 107.1 116 56.0
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 1.3e-21 106.7 115 59.1
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 6.3e-21 104.4 116 54.3
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 8.2e-21 104.0 120 57.5
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 1.8e-20 102.8 120 56.7
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 2.4e-20 102.4 119 53.8
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 3.1e-20 102.1 119 52.9
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 4.1e-20 101.7 115 53.9
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 4.1e-20 101.7 121 55.4
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 5.3e-20 101.3 120 54.2
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 5.3e-20 101.3 121 57.9
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 6.9e-20 100.9 121 56.2
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 6.9e-20 100.9 156 47.4
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 1.2e-19 100.1 121 57.9
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 1.5e-19 99.8 122 52.5
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 2.0e-19 99.4 127 54.3
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 2.0e-19 99.4 115 54.8
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 4.5e-19 98.2 121 56.2
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 5.9e-19 97.8 115 55.7
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 7.7e-19 97.4 122 53.3
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 1.0e-18 97.1 121 52.9
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 1.0e-18 97.1 121 52.9
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 1.0e-18 97.1 121 52.9
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 1.0e-18 97.1 117 51.3
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 2.2e-18 95.9 120 55.8
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 2.2e-18 95.9 120 55.8
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 2.2e-18 95.9 121 54.5
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 2.9e-18 95.5 121 53.7
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 2.9e-18 95.5 121 53.7
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 2.9e-18 95.5 121 53.7
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 6.5e-18 94.4 118 52.5
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 8.5e-18 94.0 121 52.1
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 1.4e-17 93.2 80 67.5
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 1.4e-17 93.2 111 54.1
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 5.5e-17 91.3 80 66.2
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 5.5e-17 91.3 123 52.8
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.6e-16 88.6 80 65.0
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 6.1e-16 87.8 91 59.3
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 3.9e-15 85.1 125 46.4
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 8.8e-15 84.0 114 48.2
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 1.1e-14 83.6 123 51.2
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 3.3e-14 82.0 69 69.6
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 1.3e-13 80.1 108 51.9
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 8.2e-13 77.4 115 44.3
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 8.2e-13 77.4 115 42.6
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 1.4e-12 76.6 81 58.0
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 5.3e-12 74.7 85 50.6
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 1.2e-11 73.6 75 60.0
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 1.5e-11 73.2 85 50.6
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.7e-10 69.7 68 57.4
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.7e-10 69.7 68 57.4
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.7e-10 69.7 57 73.7
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 2.9e-10 68.9 100 46.0
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 5.0e-10 68.2 197 33.5
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 7.2e-09 64.3 82 53.7
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 4.7e-08 61.6 69 50.7
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 1.8e-07 59.7 111 40.5
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 1.5e-06 56.6 130 34.6
CBR_g38024 Chara braunii HOM05D004934 ORTHO05D005924 1.5e-06 56.6 115 38.3
SEGI_07969 Sequoiadendron giganteum HOM05D004934 ORTHO05D005924 5.7e-06 54.7 36 75.0


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