Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1969 Fragaria x ananassa HOM05D000424 ORTHO05D000355 6.0e-38 161.4 166 100.0
FAN04G0992 Fragaria x ananassa HOM05D000424 ORTHO05D000355 1.0e-16 90.9 42 95.2
FAN08G2598 Fragaria x ananassa HOM05D000424 ORTHO05D000355 1.9e-15 86.7 41 92.7
RcHm_v2.0_Chr7g0215971 Rosa chinensis HOM05D000424 ORTHO05D000355 7.2e-15 84.7 40 92.5
Gorai.013G109300 Gossypium raimondii HOM05D000424 ORTHO05D000355 1.8e-13 80.1 42 81.0
MD05G1026300 Malus domestica HOM05D000424 ORTHO05D000355 1.8e-13 80.1 40 85.0
CARHR070840 Cardamine hirsuta HOM05D000424 ORTHO05D000355 3.9e-13 79.0 42 78.6
Ciclev10000990m.g Citrus clementina HOM05D000424 ORTHO05D000355 8.8e-13 77.8 42 76.2
CsaV3_6G034100 Cucumis sativus L. HOM05D000424 ORTHO05D000355 1.1e-12 77.4 41 78.0
Gohir.A02G110000 Gossypium hirsutum HOM05D000424 ORTHO05D000355 1.5e-12 77.0 42 78.6
THA.LOC104800234 Tarenaya hassleriana HOM05D000424 ORTHO05D000355 2.5e-12 76.3 42 76.2
THA.LOC104810235 Tarenaya hassleriana HOM05D000424 ORTHO05D000355 2.5e-12 76.3 42 76.2
Aqoxy3G00841 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 76.2
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 73.8
ClCG08G005980 Citrullus lanatus HOM05D000424 ORTHO05D000355 3.3e-12 75.9 41 75.6
DCAR_018877 Daucus carota HOM05D000424 ORTHO05D000355 3.3e-12 75.9 40 77.5
Dinv27276 Davidia involucrata HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 73.8
Peaxi162Scf00247g00063 Petunia axillaris HOM05D000424 ORTHO05D000355 3.3e-12 75.9 41 78.0
RhsimUnG0134300 Rhododendron simsii HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 73.8
RhsimUnG0143400 Rhododendron simsii HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 73.8
Sabra05G0137900 Salix brachista HOM05D000424 ORTHO05D000355 3.3e-12 75.9 42 76.2
A02p21230 Brassica napus HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
C02p34500 Brassica napus HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
BraA02t07142Z Brassica rapa HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
CSS0003198 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
CSS0012921 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
CSS0015280 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.3e-12 75.5 42 73.8
MBI18_g10377_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D000355 5.7e-12 75.1 42 73.8
Sp5g32520 Schrenkiella parvula HOM05D000424 ORTHO05D000355 5.7e-12 75.1 40 75.0
Thecc.08G132000 Theobroma cacao HOM05D000424 ORTHO05D000355 7.4e-12 74.7 42 73.8
Cc00_g02360 Coffea canephora HOM05D000424 ORTHO05D000355 1.3e-11 73.9 42 73.8
ECA246G4611 Erigeron canadensis HOM05D000424 ORTHO05D000355 1.3e-11 73.9 40 77.5
Thhalv10018469m.g Eutrema salsugineum HOM05D000424 ORTHO05D000355 1.3e-11 73.9 42 71.4
COL.COLO4_05687 Corchorus olitorius HOM05D000424 ORTHO05D000355 1.7e-11 73.6 42 71.4
Lj1g0004385 Lotus japonicus HOM05D000424 ORTHO05D000355 1.7e-11 73.6 40 77.5
BcaC03g15732 Brassica carinata HOM05D000424 ORTHO05D000355 2.2e-11 73.2 41 73.2
BolC2t09480H Brassica oleracea HOM05D000424 ORTHO05D000355 2.2e-11 73.2 41 73.2
MELO3C010658.2 Cucumis melo HOM05D000424 ORTHO05D000355 2.2e-11 73.2 41 73.2
Medtr3g088505 Medicago truncatula HOM05D000424 ORTHO05D000355 2.2e-11 73.2 40 77.5
Psat5g085120 Pisum sativum HOM05D000424 ORTHO05D000355 2.2e-11 73.2 40 77.5
Potri.005G181900 Populus trichocarpa HOM05D000424 ORTHO05D000355 2.2e-11 73.2 40 75.0
Lsat_1_v5_gn_6_109101 Lactuca sativa HOM05D000424 ORTHO05D000355 4.8e-11 72.0 40 72.5
PGSC0003DMG400025520 Solanum tuberosum HOM05D000424 ORTHO05D000355 4.8e-11 72.0 39 76.9
TPR.G13478 Trifolium pratense HOM05D000424 ORTHO05D000355 4.8e-11 72.0 40 75.0
EL10Ac7g16936 Beta vulgaris HOM05D000424 ORTHO05D000355 6.3e-11 71.6 42 66.7
Ah.08g210650 Amaranthus hybridus HOM05D002007 ORTHO05D000355 8.2e-11 71.2 42 64.3
arahy.Tifrunner.gnm1.ann1.Q40RKA Arachis hypogaea HOM05D000424 ORTHO05D000355 8.2e-11 71.2 42 73.8
Eucgr.F03831 Eucalyptus grandis HOM05D000424 ORTHO05D000355 8.2e-11 71.2 42 71.4
Lj7E349T1 Lonicera japonica HOM05D000424 ORTHO05D000355 8.2e-11 71.2 42 66.7
Duzib093G0352 Durio zibethinus HOM05D000424 ORTHO05D000355 1.1e-10 70.9 42 71.4
Duzib093G1185 Durio zibethinus HOM05D000424 ORTHO05D000355 1.1e-10 70.9 42 71.4
Sed0023429 Sechium edule HOM05D000424 ORTHO05D000355 1.1e-10 70.9 40 72.5
CAN.G309.56 Capsicum annuum HOM05D000424 ORTHO05D000355 1.4e-10 70.5 39 74.4
Ca_16602_v3 Cicer arietinum L. HOM05D000424 ORTHO05D000355 1.4e-10 70.5 40 77.5
Solyc11g070040.3 Solanum lycopersicum HOM05D000424 ORTHO05D000355 1.4e-10 70.5 39 74.4
Sopen11g028720 Solanum pennellii HOM05D000424 ORTHO05D000355 1.4e-10 70.5 39 74.4
Glyma.06G116600 Glycine max HOM05D000424 ORTHO05D000355 2.4e-10 69.7 42 69.0
arahy.Tifrunner.gnm1.ann1.7GQR1Z Arachis hypogaea HOM05D000424 ORTHO05D000355 3.1e-10 69.3 42 71.4
Atru.BG.208.p Acer truncatum HOM05D000424 ORTHO05D000355 5.3e-10 68.6 42 71.4
arahy.Tifrunner.gnm1.ann1.KM1CHI Arachis hypogaea HOM05D000424 ORTHO05D000355 5.3e-10 68.6 40 72.5
Nitab4.5_0000661g0080 Nicotiana tabacum HOM05D000424 ORTHO05D000355 6.9e-10 68.2 39 71.8
AUR62033507 Chenopodium quinoa HOM05D000424 ORTHO05D000355 1.2e-09 67.4 42 61.9
VMungo1309G1707 Vigna mungo HOM05D000424 ORTHO05D000355 1.2e-09 67.4 40 70.0
Nitab4.5_0003853g0010 Nicotiana tabacum HOM05D000424 ORTHO05D000355 1.5e-09 67.0 39 71.8
Os03g0761300 Oryza sativa ssp. japonica HOM05D000424 ORTHO05D000355 1.5e-09 67.0 40 67.5
Phvul.009G129200 Phaseolus vulgaris HOM05D000424 ORTHO05D000355 2.6e-09 66.2 40 70.0
AUR62028554 Chenopodium quinoa HOM05D000424 ORTHO05D000355 3.4e-09 65.9 42 59.5
HanXRQChr05g0149191 Helianthus annuus HOM05D000424 ORTHO05D000355 3.4e-09 65.9 37 70.3
TWI34G0420 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 4.5e-09 65.5 42 64.3
FvH4_5g25662 Fragaria vesca HOM05D000424 ORTHO05D000355 5.9e-09 65.1 41 70.7
Prupe.1G490700 Prunus persica HOM05D000424 ORTHO05D000355 2.2e-08 63.2 40 70.0
SGA_v2.0_scaffold105G30402 Striga asiatica HOM05D000424 ORTHO05D000355 2.9e-08 62.8 39 64.1
Zm00001eb058140 Zea mays HOM05D000424 ORTHO05D000355 8.5e-08 61.2 40 60.0
SHI09190 Sapria himalayana HOM05D000424 ORTHO05D000355 3.2e-07 59.3 36 72.2
ATR0326G024 Amborella trichopoda HOM05D000424 ORTHO05D000355 6.1e-06 55.1 41 56.1


User provided reference genes

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