Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.6e-130 468.8 247 100.0
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.2e-128 461.5 246 98.4
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.5e-128 461.1 247 94.3
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 7.1e-128 460.7 247 98.0
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.6e-127 459.5 247 94.3
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 2.7e-127 458.8 247 93.9
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.1e-99 365.5 247 83.8
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.4e-91 340.1 253 70.8
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 4.7e-79 298.5 248 62.5
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 1.3e-76 290.4 247 61.9
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 1.8e-75 286.6 249 62.2
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 3.2e-75 285.8 252 65.5
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 9.2e-75 284.3 244 60.7
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.2e-74 283.9 247 59.9
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.2e-74 283.9 248 61.3
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 5.9e-74 281.6 247 59.1
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.0e-73 280.8 243 62.1
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 1.3e-73 280.4 249 60.6
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 5.6e-72 275.0 244 59.8
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 5.6e-72 275.0 253 60.5
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 2.8e-71 272.7 243 58.0
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 2.8e-71 272.7 243 58.0
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 3.6e-71 272.3 246 58.5
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 3.1e-70 269.2 245 60.0
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 3.1e-70 269.2 247 56.7
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 4.0e-70 268.9 241 56.8
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 4.0e-70 268.9 247 59.5
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 5.2e-70 268.5 243 58.8
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 8.9e-70 267.7 243 60.1
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 1.2e-69 267.3 244 61.1
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 2.0e-69 266.5 246 54.9
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 2.6e-69 266.2 246 56.9
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 4.4e-69 265.4 248 57.7
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 9.8e-69 264.2 248 57.7
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.3e-68 263.8 248 57.3
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.2e-68 263.1 248 57.7
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 2.9e-68 262.7 245 57.6
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.4e-67 260.4 249 54.2
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 5.4e-67 258.5 244 57.8
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.6e-66 256.9 245 56.7
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.0e-66 256.5 245 58.8
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 2.7e-66 256.1 242 57.4
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 3.5e-66 255.8 243 57.2
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 7.8e-66 254.6 244 56.6
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 7.8e-66 254.6 188 66.5
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.3e-65 253.8 242 53.7
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.3e-65 253.8 249 54.6
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 3.0e-65 252.7 244 56.1
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 3.9e-65 252.3 239 58.2
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 3.9e-65 252.3 192 67.7
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 8.6e-65 251.1 247 55.1
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 1.5e-64 250.4 248 57.3
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.9e-64 250.0 245 55.9
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 5.6e-64 248.4 242 56.2
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 6.2e-63 245.0 252 54.0
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 8.1e-63 244.6 236 56.8
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 2.3e-62 243.0 246 53.7
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 3.1e-62 242.7 246 53.7
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 5.2e-62 241.9 196 64.3
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 5.2e-62 241.9 245 54.3
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 6.8e-62 241.5 244 54.1
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 8.9e-62 241.1 257 54.5
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 2.0e-61 240.0 254 55.9
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 2.6e-61 239.6 244 56.6
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 2.6e-61 239.6 250 57.6
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 4.4e-61 238.8 249 54.6
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 7.5e-61 238.0 245 57.6
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 1.7e-60 236.9 249 56.6
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 3.7e-60 235.7 244 54.5
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 8.3e-60 234.6 252 54.4
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 1.1e-59 234.2 243 54.7
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.9e-59 233.4 231 55.8
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 7.1e-59 231.5 246 54.1
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 2.1e-58 229.9 240 58.3
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 4.6e-58 228.8 251 51.4
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 1.0e-57 227.6 236 55.9
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.7e-57 226.9 240 55.4
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.4e-54 217.2 256 55.5
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 2.3e-54 216.5 263 49.8
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 4.0e-54 215.7 216 55.1
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.2e-53 214.2 265 50.6
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 4.4e-53 212.2 231 53.7
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 7.6e-53 211.5 248 50.0
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.7e-52 210.3 224 50.4
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.4e-51 206.5 215 50.7
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.1e-50 203.4 185 56.8
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 2.1e-50 203.4 193 57.5
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 2.7e-50 203.0 250 49.2
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 1.5e-48 197.2 250 47.2
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.5e-48 196.4 242 47.1
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 4.3e-48 195.7 223 51.1
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.6e-47 192.6 133 68.4
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 8.1e-47 191.4 217 49.3
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 3.0e-41 172.9 246 43.1
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 4.0e-38 162.5 190 46.3
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 6.9e-38 161.8 196 43.4
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 8.4e-36 154.8 194 44.8
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 1.1e-35 154.5 204 40.7
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 4.8e-31 139.0 202 43.1
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.9e-28 129.0 250 38.4
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 4.2e-27 125.9 171 48.5
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-26 124.4 171 48.0
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 1.2e-26 124.4 171 48.0
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 2.5e-24 116.7 140 50.0
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.1e-19 101.3 140 44.3
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.9e-19 100.5 238 38.7
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.9e-19 100.5 238 38.7
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 9.3e-19 98.2 142 46.5
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 7.9e-18 95.1 129 45.7
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 7.9e-18 95.1 147 42.9
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 7.9e-18 95.1 132 43.2
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 3.0e-17 93.2 106 50.0
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 8.7e-17 91.7 148 43.2
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 2.5e-16 90.1 146 40.4
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 5.7e-16 89.0 147 40.1
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 7.4e-16 88.6 143 45.5
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 2.1e-15 87.0 145 42.8
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.4e-14 84.3 143 37.1
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.8e-14 84.0 143 39.9
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 3.1e-14 83.2 133 40.6
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 5.3e-14 82.4 128 42.2
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 5.9e-13 79.0 146 39.7
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 1.3e-12 77.8 123 42.3
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 6.1e-10 68.9 65 53.8
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 4.1e-06 56.2 54 59.3


User provided reference genes

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