Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.3e-63 245.4 121 100.0
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.1e-62 243.0 121 99.2
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.1e-62 243.0 121 99.2
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 4.4e-62 241.1 121 98.3
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.8e-61 238.4 121 97.5
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 9.1e-60 233.4 121 94.2
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 1.2e-43 179.9 120 76.7
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 1.0e-42 176.8 121 72.7
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 2.2e-42 175.6 123 72.4
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 2.9e-42 175.3 121 71.9
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 1.9e-41 172.6 122 71.3
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.9e-41 172.6 119 73.1
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 3.6e-40 168.3 127 69.3
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 3.6e-40 168.3 119 70.6
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 2.3e-39 165.6 119 70.6
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 5.2e-39 164.5 122 68.9
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 8.8e-39 163.7 119 69.7
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 7.5e-38 160.6 116 68.1
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 2.2e-37 159.1 119 63.9
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 6.3e-37 157.5 119 63.0
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 6.3e-37 157.5 120 67.5
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.4e-36 156.4 123 67.5
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 1.8e-36 156.0 121 66.9
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 2.4e-36 155.6 109 73.4
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 7.0e-36 154.1 123 66.7
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 9.2e-36 153.7 125 64.0
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 2.7e-35 152.1 121 65.3
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.7e-34 149.4 127 64.6
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 1.7e-34 149.4 117 65.0
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 2.9e-34 148.7 119 62.2
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.9e-34 148.7 116 62.1
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.6e-34 147.5 122 63.9
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 8.6e-34 147.1 116 65.5
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 1.1e-33 146.7 119 63.0
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 1.5e-33 146.4 119 62.2
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.9e-33 146.0 116 64.7
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 3.3e-33 145.2 116 65.5
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 5.6e-33 144.4 123 60.2
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 7.3e-33 144.1 124 61.3
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.1e-32 142.5 124 60.5
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.1e-32 142.5 114 65.8
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 3.6e-32 141.7 117 63.2
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 4.7e-32 141.4 119 63.9
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.4e-31 139.8 119 62.2
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 2.3e-31 139.0 120 59.2
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 2.3e-31 139.0 120 59.2
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 5.2e-31 137.9 109 65.1
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 5.2e-31 137.9 122 60.7
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.8e-31 137.5 118 64.4
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 6.8e-31 137.5 118 64.4
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 8.9e-31 137.1 124 56.5
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 8.9e-31 137.1 118 61.9
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.5e-30 136.3 118 63.6
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 2.0e-30 136.0 117 61.5
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 2.6e-30 135.6 121 55.4
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.6e-30 135.6 121 62.0
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 3.4e-30 135.2 127 58.3
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 4.4e-30 134.8 114 63.2
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 1.3e-29 133.3 124 60.5
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 1.7e-29 132.9 124 61.3
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 1.7e-29 132.9 118 61.0
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 2.9e-29 132.1 126 57.1
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 2.9e-29 132.1 120 58.3
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 6.4e-29 131.0 117 55.6
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 6.4e-29 131.0 123 54.5
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 8.3e-29 130.6 121 57.9
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 4.1e-28 128.3 111 60.4
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 1.2e-27 126.7 127 54.3
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.2e-27 126.7 119 53.8
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.6e-27 126.3 119 52.1
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 4.6e-27 124.8 119 53.8
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 5.9e-27 124.4 120 55.8
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 7.8e-27 124.0 118 54.2
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 1.0e-26 123.6 99 63.6
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.7e-26 122.9 121 52.9
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.7e-26 122.9 110 60.0
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.7e-26 122.9 110 57.3
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 1.1e-25 120.2 115 60.9
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 5.6e-25 117.9 121 52.1
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 7.3e-25 117.5 117 55.6
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.2e-24 116.7 123 50.4
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 1.2e-24 116.7 99 59.6
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.1e-23 112.1 121 51.2
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 1.2e-22 110.2 127 48.0
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 7.5e-22 107.5 117 54.7
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 1.4e-20 103.2 116 49.1
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 2.4e-20 102.4 129 48.1
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 4.1e-20 101.7 127 44.1
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 2.7e-19 99.0 111 51.4
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 2.7e-19 99.0 111 51.4
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-19 98.2 111 50.5
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-19 98.2 111 50.5
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-19 98.2 111 50.5
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-19 98.2 111 50.5
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 4.6e-19 98.2 111 50.5
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 6.0e-19 97.8 113 53.1
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 6.0e-19 97.8 111 50.5
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 7.8e-19 97.4 114 50.0
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 1.0e-18 97.1 112 49.1
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 1.3e-18 96.7 111 47.7
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 1.3e-18 96.7 110 48.2
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.3e-18 96.7 119 47.9
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 1.7e-18 96.3 111 47.7
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 2.3e-18 95.9 110 48.2
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 2.3e-18 95.9 110 48.2
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 3.0e-18 95.5 112 46.4
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 3.9e-18 95.1 110 52.7
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 6.6e-18 94.4 113 51.3
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 6.6e-18 94.4 110 48.2
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 6.6e-18 94.4 110 48.2
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 1.5e-17 93.2 111 52.3
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 3.3e-17 92.0 63 66.7
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 7.3e-17 90.9 116 48.3
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 8.1e-16 87.4 94 53.2
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 8.1e-16 87.4 112 42.0
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 1.1e-15 87.0 115 47.0
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 1.5e-14 83.2 117 44.4
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.4e-12 75.9 86 48.8
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 5.1e-10 68.2 94 43.6
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 4.3e-09 65.1 110 40.0
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 3.6e-08 62.0 70 48.6
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 9.9e-06 53.9 121 32.2


User provided reference genes

Program Settings