Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1808 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-87 326.2 174 100.0
FAN18G0723 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.1e-82 307.4 175 88.6
FAN18G1336 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.1e-82 307.4 175 88.6
FAN08G0393 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.2e-81 306.6 174 92.5
FAN04G0077 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-63 246.5 184 80.4
FvH4_5g12320 Fragaria vesca HOM05D006108 ORTHO05D007605 2.6e-52 209.1 125 85.6
RcHm_v2.0_Chr7g0185241 Rosa chinensis HOM05D006108 ORTHO05D007605 4.5e-52 208.4 124 91.9
Prupe.5G220300 Prunus persica HOM05D006108 ORTHO05D007605 5.5e-34 148.3 99 77.8
Gorai.006G195000 Gossypium raimondii HOM05D006108 ORTHO05D007605 1.2e-33 147.1 110 66.4
Dinv09807 Davidia involucrata HOM05D006108 ORTHO05D007605 1.6e-33 146.7 80 85.0
Gohir.A09G177600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.6e-33 145.6 109 67.0
MD06G1214900 Malus domestica HOM05D006108 ORTHO05D007605 3.6e-33 145.6 115 69.6
Gohir.D09G173100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 6.1e-33 144.8 110 64.5
Duzib084G1067 Durio zibethinus HOM05D006108 ORTHO05D007605 1.4e-32 143.7 80 80.0
Thecc.03G033400 Theobroma cacao HOM05D006108 ORTHO05D007605 2.3e-32 142.9 107 65.4
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 2.2e-30 136.3 87 74.7
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 3.7e-30 135.6 105 67.6
Rhsim12G0143800 Rhododendron simsii HOM05D006108 ORTHO05D007605 4.8e-30 135.2 79 79.7
Gohir.A09G047400 Gossypium hirsutum HOM05D006108 ORTHO05D007605 6.3e-30 134.8 108 62.0
Gorai.006G061500 Gossypium raimondii HOM05D006108 ORTHO05D007605 6.3e-30 134.8 108 62.0
Gohir.D09G048600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.4e-29 133.7 108 62.0
MD14G1225800 Malus domestica HOM05D006108 ORTHO05D007605 1.8e-29 133.3 75 86.7
Ciclev10022919m.g Citrus clementina HOM05D006108 ORTHO05D007605 5.4e-29 131.7 111 64.0
Atru.chr9.818 Acer truncatum HOM05D006108 ORTHO05D007605 1.6e-28 130.2 78 83.3
Glyma.09G185400 Glycine max HOM05D006108 ORTHO05D007605 1.6e-28 130.2 115 60.9
Glyma.07G090500 Glycine max HOM05D006108 ORTHO05D007605 5.9e-28 128.3 115 60.9
Lj2g0017619 Lotus japonicus HOM05D006108 ORTHO05D007605 5.9e-28 128.3 82 75.6
Manes.05G140027 Manihot esculenta HOM05D006108 ORTHO05D007605 1.0e-27 127.5 73 84.9
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 2.9e-27 125.9 79 75.9
Nn3g17803 Nelumbo nucifera HOM05D006108 ORTHO05D007605 2.9e-27 125.9 80 73.8
Eucgr.B00718 Eucalyptus grandis HOM05D006108 ORTHO05D007605 8.6e-27 124.4 76 76.3
TPR.G35239 Trifolium pratense HOM05D006108 ORTHO05D007605 8.6e-27 124.4 123 53.7
Psat6g222560 Pisum sativum HOM05D006108 ORTHO05D007605 2.5e-26 122.9 76 77.6
CiPaw.15G129300 Carya illinoinensis HOM05D006108 ORTHO05D007605 4.2e-26 122.1 77 76.6
Sed0021850 Sechium edule HOM05D006108 ORTHO05D007605 7.2e-26 121.3 115 56.5
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 9.5e-26 120.9 82 64.6
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 1.2e-25 120.6 83 66.3
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 1.2e-25 120.6 109 58.7
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 1.6e-25 120.2 93 60.2
Prupe.1G308800 Prunus persica HOM05D006108 ORTHO05D007605 2.1e-25 119.8 76 73.7
Sopen03g038460 Solanum pennellii HOM05D006108 ORTHO05D007605 2.8e-25 119.4 116 56.9
Phvul.004G158700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 3.6e-25 119.0 77 74.0
QL10p025064 Quercus lobata HOM05D006108 ORTHO05D007605 1.0e-24 117.5 68 80.9
CSS0049683 Camellia sinensis var. sinensis HOM05D006108 ORTHO05D007605 1.4e-24 117.1 72 75.0
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 1.4e-24 117.1 74 73.0
CsaV3_1G006560 Cucumis sativus L. HOM05D006108 ORTHO05D007605 1.8e-24 116.7 100 58.0
MD13G1043700 Malus domestica HOM05D006108 ORTHO05D007605 2.3e-24 116.3 79 65.8
TWI79G0681 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 3.0e-24 115.9 85 62.4
Nn4g23806 Nelumbo nucifera HOM05D006108 ORTHO05D007605 4.0e-24 115.5 68 75.0
PSO017G5628 Papaver somniferum HOM05D006108 ORTHO05D007605 4.0e-24 115.5 74 68.9
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-23 113.6 72 70.8
Gorai.008G184200 Gossypium raimondii HOM05D006108 ORTHO05D007605 2.0e-23 113.2 77 64.9
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea HOM05D006108 ORTHO05D007605 2.6e-23 112.8 68 82.4
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea HOM05D006108 ORTHO05D007605 2.6e-23 112.8 68 82.4
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 5.7e-23 111.7 71 71.8
Ciclev10033455m.g Citrus clementina HOM05D006108 ORTHO05D007605 1.7e-22 110.2 73 72.6
Phvul.003G034700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 2.2e-22 109.8 77 62.3
TWI31G1391 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 2.8e-22 109.4 84 60.7
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 3.7e-22 109.0 78 64.1
PGSC0003DMG402005714 Solanum tuberosum HOM05D006108 ORTHO05D007605 3.7e-22 109.0 73 74.0
TPR.G38355 Trifolium pratense HOM05D006108 ORTHO05D007605 3.7e-22 109.0 77 61.0
Glyma.01G082600 Glycine max HOM05D006108 ORTHO05D007605 6.3e-22 108.2 77 61.0
Sabra08G0090500 Salix brachista HOM05D006108 ORTHO05D007605 6.3e-22 108.2 85 58.8
CDE05G0497 Ceratophyllum demersum HOM05D006108 ORTHO05D007605 8.3e-22 107.8 76 68.4
HanXRQChr02g0058721 Helianthus annuus HOM05D006108 ORTHO05D007605 8.3e-22 107.8 78 64.1
Potri.008G119200 Populus trichocarpa HOM05D006108 ORTHO05D007605 1.1e-21 107.5 81 59.3
Oeu008040.1 Olea europaea HOM05D006108 ORTHO05D007605 1.4e-21 107.1 68 75.0
Oeu041896.1 Olea europaea HOM05D006108 ORTHO05D007605 1.4e-21 107.1 68 76.5
Lsat_1_v5_gn_8_39200 Lactuca sativa HOM05D006108 ORTHO05D007605 1.8e-21 106.7 76 64.5
CiPaw.15G083500 Carya illinoinensis HOM05D006108 ORTHO05D007605 2.4e-21 106.3 85 58.8
Lj2g0013090 Lotus japonicus HOM05D006108 ORTHO05D007605 2.4e-21 106.3 74 63.5
Manes.06G070100 Manihot esculenta HOM05D006108 ORTHO05D007605 3.1e-21 105.9 81 56.8
Manes.14G100500 Manihot esculenta HOM05D006108 ORTHO05D007605 3.1e-21 105.9 81 59.3
Nitab4.5_0001599g0060 Nicotiana tabacum HOM05D006108 ORTHO05D007605 3.1e-21 105.9 74 71.6
Nitab4.5_0004412g0100 Nicotiana tabacum HOM05D006108 ORTHO05D007605 3.1e-21 105.9 74 71.6
Medtr5g055190 Medicago truncatula HOM05D006108 ORTHO05D007605 4.1e-21 105.5 73 63.0
Os09g0408550 Oryza sativa ssp. japonica HOM05D006108 ORTHO05D007605 4.1e-21 105.5 68 70.6
Gohir.A12G168100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.2e-20 104.0 70 67.1
Eucgr.B03028 Eucalyptus grandis HOM05D006108 ORTHO05D007605 3.5e-20 102.4 78 61.5
Sed0000256 Sechium edule HOM05D006108 ORTHO05D007605 3.5e-20 102.4 81 58.0
Migut.L01077 Erythranthe guttata HOM05D006108 ORTHO05D007605 4.5e-20 102.1 86 58.1
MD16G1044500 Malus domestica HOM05D006108 ORTHO05D007605 4.5e-20 102.1 73 63.0
Gohir.D12G171700 Gossypium hirsutum HOM05D006108 ORTHO05D007605 5.9e-20 101.7 70 65.7
DCAR_026728 Daucus carota HOM05D006108 ORTHO05D007605 7.8e-20 101.3 75 64.0
QL01p043861 Quercus lobata HOM05D006108 ORTHO05D007605 1.3e-19 100.5 72 63.9
Sc14g0007540 Simmondsia chinensis HOM05D006108 ORTHO05D007605 1.7e-19 100.1 69 71.0
HPP92_026959 Vanilla planifolia HOM05D006108 ORTHO05D007605 1.7e-19 100.1 103 50.5
PGR102G2516 Punica granatum HOM05D006108 ORTHO05D007605 2.3e-19 99.8 75 64.0
FAN12G0874 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.9e-19 99.4 78 61.5
Psat2g097920 Pisum sativum HOM05D006108 ORTHO05D007605 2.9e-19 99.4 70 65.7
BcaB07g30252 Brassica carinata HOM05D006108 ORTHO05D007605 6.6e-19 98.2 73 58.9
Sp2g15090 Schrenkiella parvula HOM05D006108 ORTHO05D007605 6.6e-19 98.2 73 56.2
BcaC03g17291 Brassica carinata HOM05D006108 ORTHO05D007605 1.9e-18 96.7 73 57.5
A02p34100 Brassica napus HOM05D006108 ORTHO05D007605 1.9e-18 96.7 73 57.5
BolC2t11319H Brassica oleracea HOM05D006108 ORTHO05D007605 1.9e-18 96.7 73 57.5
Lalb_Chr10g0099931 Lupinus albus HOM05D006108 ORTHO05D007605 1.9e-18 96.7 69 63.8
Zm00001eb099300 Zea mays HOM05D006108 ORTHO05D007605 1.9e-18 96.7 72 65.3
BcaC06g33947 Brassica carinata HOM05D006108 ORTHO05D007605 5.6e-18 95.1 71 56.3
A06p42440 Brassica napus HOM05D006108 ORTHO05D007605 5.6e-18 95.1 71 56.3
BraA06t27159Z Brassica rapa HOM05D006108 ORTHO05D007605 5.6e-18 95.1 71 56.3
Carub.0005s0368 Capsella rubella HOM05D006108 ORTHO05D007605 1.2e-17 94.0 73 53.4
CARHR146800 Cardamine hirsuta HOM05D006108 ORTHO05D007605 1.2e-17 94.0 73 56.2
BolC7t44019H Brassica oleracea HOM05D006108 ORTHO05D007605 1.6e-17 93.6 71 56.3
CsaV3_6G003400 Cucumis sativus L. HOM05D006108 ORTHO05D007605 1.6e-17 93.6 71 56.3
THA.LOC104824033 Tarenaya hassleriana HOM05D006108 ORTHO05D007605 1.6e-17 93.6 71 59.2
C07p34870 Brassica napus HOM05D006108 ORTHO05D007605 2.8e-17 92.8 71 54.9
Cc11_g10300 Coffea canephora HOM05D006108 ORTHO05D007605 2.8e-17 92.8 69 62.3
AT3G25855 Arabidopsis thaliana HOM05D006108 ORTHO05D007605 3.6e-17 92.4 73 53.4
Thhalv10005176m.g Eutrema salsugineum HOM05D006108 ORTHO05D007605 4.7e-17 92.0 67 61.2
BcaC06g31111 Brassica carinata HOM05D006108 ORTHO05D007605 8.0e-17 91.3 70 52.9
Nitab4.5_0003285g0040 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.0e-16 90.9 67 61.2
CAN.G388.38 Capsicum annuum HOM05D006108 ORTHO05D007605 1.4e-16 90.5 68 58.8
AL5G14490 Arabidopsis lyrata HOM05D006108 ORTHO05D007605 1.8e-16 90.1 70 54.3
C02p52370 Brassica napus HOM05D006108 ORTHO05D007605 2.3e-16 89.7 67 59.7
BraA02t08427Z Brassica rapa HOM05D006108 ORTHO05D007605 2.3e-16 89.7 67 59.7
Nitab4.5_0001914g0010 Nicotiana tabacum HOM05D006108 ORTHO05D007605 6.8e-16 88.2 67 59.7
Sopen05g012490 Solanum pennellii HOM05D006108 ORTHO05D007605 1.2e-15 87.4 74 56.8
Cpa.g.sc1.185 Carica papaya HOM05D006108 ORTHO05D007605 3.2e-13 79.3 60 63.3
Peaxi162Scf00015g00844 Petunia axillaris HOM05D006108 ORTHO05D007605 7.0e-13 78.2 101 48.5
ClCG04G011190 Citrullus lanatus HOM05D006108 ORTHO05D007605 1.6e-12 77.0 93 47.3
ECA233G5877 Erigeron canadensis HOM05D006108 ORTHO05D007605 3.9e-11 72.4 54 64.8
TWI15G1195 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 3.3e-10 69.3 49 75.5
Sed0027931 Sechium edule HOM05D006108 ORTHO05D007605 7.3e-10 68.2 47 66.0
CAN.G438.131 Capsicum annuum HOM05D006108 ORTHO05D007605 9.5e-10 67.8 45 75.6
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea HOM05D006108 ORTHO05D007605 8.0e-09 64.7 46 67.4
ClCG08G005220 Citrullus lanatus HOM05D006108 ORTHO05D007605 1.4e-08 63.9 74 47.3
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 4.0e-08 62.4 44 70.5
Hund05757 Selenicereus undatus HOM05D006108 ORTHO05D007605 8.9e-08 61.2 45 68.9
PGSC0003DMG400010902 Solanum tuberosum HOM05D006108 ORTHO05D007605 1.2e-07 60.8 39 74.4
MELO3C011555.2 Cucumis melo HOM05D006108 ORTHO05D007605 2.9e-06 56.2 41 61.0


User provided reference genes

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