Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1762 Fragaria x ananassa HOM05D000166 ORTHO05D016123 5.9e-45 183.7 86 100.0
FAN04G2835 Fragaria x ananassa HOM05D000166 ORTHO05D000812 2.6e-32 141.7 69 95.7
FvH4_5g27161 Fragaria vesca HOM05D000166 ORTHO05D000812 1.1e-30 136.3 69 92.8
FAN08G2197 Fragaria x ananassa HOM05D000166 ORTHO05D000812 1.2e-26 122.9 70 82.9
RcHm_v2.0_Chr7g0218261 Rosa chinensis HOM05D000166 ORTHO05D000812 5.2e-25 117.5 69 78.3
FAN18G3149 Fragaria x ananassa HOM05D000166 ORTHO05D000812 1.3e-23 112.8 71 76.1
FvH4_5g27170 Fragaria vesca HOM05D000166 ORTHO05D000812 1.4e-22 109.4 71 74.6
CANSAT01G2523 Cannabis sativa HOM05D000166 ORTHO05D000812 1.9e-11 72.4 71 52.1
TWI59G0440 Tripterygium wilfordii HOM05D000166 ORTHO05D000812 2.5e-11 72.0 69 47.8
Sc03g0005570 Simmondsia chinensis HOM05D000166 ORTHO05D000812 9.5e-11 70.1 69 46.4
Lalb_Chr18g0059301 Lupinus albus HOM05D000166 ORTHO05D000812 1.6e-10 69.3 70 47.1
QL02p103842 Quercus lobata HOM05D000166 ORTHO05D000812 1.6e-10 69.3 69 47.8
QL02p104378 Quercus lobata HOM05D000166 ORTHO05D000812 1.6e-10 69.3 69 47.8
QL02p104431 Quercus lobata HOM05D000166 ORTHO05D000812 1.6e-10 69.3 69 47.8
Glyma.09G018800 Glycine max HOM05D000166 ORTHO05D000812 2.8e-10 68.6 69 46.4
Lj6g0004881 Lotus japonicus HOM05D000166 ORTHO05D000812 2.8e-10 68.6 70 45.7
Lalb_Chr15g0089591 Lupinus albus HOM05D000166 ORTHO05D000812 2.8e-10 68.6 72 47.2
Medtr2g028580 Medicago truncatula HOM05D000166 ORTHO05D000812 2.8e-10 68.6 70 47.1
QL02p103806 Quercus lobata HOM05D000166 ORTHO05D000812 2.8e-10 68.6 69 49.3
QL02p004875 Quercus lobata HOM05D000166 ORTHO05D000812 3.6e-10 68.2 69 47.8
Dinv30980 Davidia involucrata HOM05D000166 ORTHO05D000812 6.1e-10 67.4 85 38.8
Hma1.2p1_0157F.1_g069330 Hydrangea macrophylla HOM05D000166 ORTHO05D000812 6.1e-10 67.4 69 42.0
Glyma.15G124900 Glycine max HOM05D000166 ORTHO05D000812 8.0e-10 67.0 69 46.4
Rhsim11G0114000 Rhododendron simsii HOM05D000166 ORTHO05D000812 8.0e-10 67.0 69 44.9
Dinv24551 Davidia involucrata HOM05D000166 ORTHO05D000812 1.0e-09 66.6 87 40.2
vmacro01635 Vaccinium macrocarpon HOM05D000166 ORTHO05D000812 1.0e-09 66.6 72 45.8
DCAR_003264 Daucus carota HOM05D000166 ORTHO05D000812 1.4e-09 66.2 69 39.1
Ca_11364_v3 Cicer arietinum L. HOM05D000166 ORTHO05D000812 1.8e-09 65.9 70 47.1
Cc02_g23860 Coffea canephora HOM05D000166 ORTHO05D000812 1.8e-09 65.9 69 47.8
Sabra01G0177900 Salix brachista HOM05D000166 ORTHO05D000812 2.3e-09 65.5 69 43.5
AUR62032500 Chenopodium quinoa HOM05D000166 ORTHO05D000812 3.0e-09 65.1 43 62.8
Glyma.10G069500 Glycine max HOM05D000166 ORTHO05D000812 4.0e-09 64.7 71 46.5
Lsat_1_v5_gn_9_81501 Lactuca sativa HOM05D000166 ORTHO05D000812 4.0e-09 64.7 69 42.0
Nn5g27097 Nelumbo nucifera HOM05D000166 ORTHO05D000812 4.0e-09 64.7 69 44.9
TPR.G11679 Trifolium pratense HOM05D000166 ORTHO05D000812 4.0e-09 64.7 72 47.2
vmacro01632 Vaccinium macrocarpon HOM05D000166 ORTHO05D000812 4.0e-09 64.7 69 43.5
Sabra01G0178000 Salix brachista HOM05D000166 ORTHO05D000812 5.2e-09 64.3 69 40.6
Duzib235G1050 Durio zibethinus HOM05D000166 ORTHO05D000812 6.8e-09 63.9 42 59.5
HanXRQChr02g0052731 Helianthus annuus HOM05D000166 ORTHO05D000812 6.8e-09 63.9 69 44.9
Lju3927C0T8 Lonicera japonica HOM05D000166 ORTHO05D000812 8.9e-09 63.5 69 46.4
Manes.06G015800 Manihot esculenta HOM05D000166 ORTHO05D000812 8.9e-09 63.5 69 43.5
Solyc01g102710.2 Solanum lycopersicum HOM05D000166 ORTHO05D000812 8.9e-09 63.5 61 45.9
Cfa013275 Carpinus fangiana HOM05D000166 ORTHO05D000812 1.2e-08 63.2 69 44.9
Thecc.06G061500 Theobroma cacao HOM05D000166 ORTHO05D000812 1.2e-08 63.2 61 47.5
Atru.chr6.63 Acer truncatum HOM05D000166 ORTHO05D000812 1.5e-08 62.8 69 43.5
CiPaw.05G000300 Carya illinoinensis HOM05D000166 ORTHO05D000812 1.5e-08 62.8 69 49.3
Glyma.13G152542 Glycine max HOM05D000166 ORTHO05D000812 1.5e-08 62.8 71 46.5
Psat1g170600 Pisum sativum HOM05D000166 ORTHO05D000812 1.5e-08 62.8 70 42.9
FAN11G0704 Fragaria x ananassa HOM05D000166 ORTHO05D000812 2.0e-08 62.4 71 42.3
PGSC0003DMG400018263 Solanum tuberosum HOM05D000166 ORTHO05D000812 2.0e-08 62.4 61 47.5
Atru.chr6.58 Acer truncatum HOM05D000166 ORTHO05D000812 2.6e-08 62.0 64 45.3
Manes.14G162000 Manihot esculenta HOM05D000166 ORTHO05D000812 2.6e-08 62.0 69 42.0
Os05g0486100 Oryza sativa ssp. japonica HOM05D000166 ORTHO05D000812 2.6e-08 62.0 47 55.3
PGR042G2464 Punica granatum HOM05D000166 ORTHO05D000812 2.6e-08 62.0 62 46.8
SHI30525 Sapria himalayana HOM05D000166 ORTHO05D000812 2.6e-08 62.0 69 42.0
TAR623G1500 Trochodendron aralioides HOM05D000166 ORTHO05D000812 2.6e-08 62.0 65 44.6
HPP92_019032 Vanilla planifolia HOM05D000166 ORTHO05D000812 2.6e-08 62.0 63 42.9
Haze_09950 Corylus avellana HOM05D000166 ORTHO05D000812 3.4e-08 61.6 68 44.1
Lsat_1_v5_gn_9_81480 Lactuca sativa HOM05D000166 ORTHO05D000812 3.4e-08 61.6 69 39.1
Lj6g0018715 Lotus japonicus HOM05D000166 ORTHO05D000812 3.4e-08 61.6 69 42.0
Sabra01G0177600 Salix brachista HOM05D000166 ORTHO05D000812 3.4e-08 61.6 65 43.1
HanXRQChr03g0070841 Helianthus annuus HOM05D000166 ORTHO05D016123 4.4e-08 61.2 69 39.1
Rhsim01G0088200 Rhododendron simsii HOM05D000166 ORTHO05D000812 4.4e-08 61.2 54 46.3
THA.LOC104800316 Tarenaya hassleriana HOM05D000166 ORTHO05D000812 4.4e-08 61.2 64 46.9
HPP92_027376 Vanilla planifolia HOM05D000166 ORTHO05D000812 4.4e-08 61.2 68 45.6
Actinidia11716 Actinidia chinensis HOM05D000166 ORTHO05D000812 5.7e-08 60.8 46 52.2
Potri.004G232500 Populus trichocarpa HOM05D000166 ORTHO05D000812 7.5e-08 60.5 63 46.0
Rhsim11G0113000 Rhododendron simsii HOM05D000166 ORTHO05D000812 7.5e-08 60.5 69 43.5
Rhsim11G0113400 Rhododendron simsii HOM05D000166 ORTHO05D000812 7.5e-08 60.5 69 43.5
Sopen01g045130 Solanum pennellii HOM05D000166 ORTHO05D000812 7.5e-08 60.5 54 46.3
Eucgr.G00043 Eucalyptus grandis HOM05D000166 ORTHO05D000812 9.8e-08 60.1 61 41.0
Phvul.006G133400 Phaseolus vulgaris HOM05D000166 ORTHO05D000812 9.8e-08 60.1 67 41.8
MSTRG.20344 Avicennia marina HOM05D000166 ORTHO05D000812 1.3e-07 59.7 61 45.9
CSS0030422 Camellia sinensis var. sinensis HOM05D000166 ORTHO05D000812 1.3e-07 59.7 69 39.1
CiPaw.16G077700 Carya illinoinensis HOM05D000166 ORTHO05D000812 1.3e-07 59.7 64 45.3
Gohir.A06G182300 Gossypium hirsutum HOM05D000166 ORTHO05D000812 1.3e-07 59.7 61 45.9
Nitab4.5_0006947g0050 Nicotiana tabacum HOM05D000166 ORTHO05D000812 1.3e-07 59.7 66 42.4
Potri.004G231700 Populus trichocarpa HOM05D000166 ORTHO05D000812 1.3e-07 59.7 69 40.6
Potri.004G231850 Populus trichocarpa HOM05D000166 ORTHO05D000812 1.3e-07 59.7 69 40.6
MSTRG.5182 Avicennia marina HOM05D000166 ORTHO05D000812 1.7e-07 59.3 67 44.8
COL.COLO4_31099 Corchorus olitorius HOM05D000166 ORTHO05D000812 1.7e-07 59.3 63 44.4
Eucgr.G00041 Eucalyptus grandis HOM05D000166 ORTHO05D000812 1.7e-07 59.3 69 40.6
Psat4g111440 Pisum sativum HOM05D000166 ORTHO05D000812 1.7e-07 59.3 68 44.1
TAR383G0658 Trochodendron aralioides HOM05D000166 ORTHO05D000812 1.7e-07 59.3 65 43.1
Dinv30981 Davidia involucrata HOM05D000166 ORTHO05D000812 2.2e-07 58.9 44 52.3
Migut.B00695 Erythranthe guttata HOM05D000166 ORTHO05D000812 2.2e-07 58.9 66 45.5
Eucgr.K01321 Eucalyptus grandis HOM05D000166 ORTHO05D000812 2.2e-07 58.9 66 40.9
Lj9C241G7 Lonicera japonica HOM05D000166 ORTHO05D000812 2.2e-07 58.9 69 43.5
Nitab4.5_0001085g0050 Nicotiana tabacum HOM05D000166 ORTHO05D000812 2.2e-07 58.9 69 40.6
Peaxi162Scf00194g00933 Petunia axillaris HOM05D000166 ORTHO05D000812 2.2e-07 58.9 38 60.5
CiPaw.16G077900 Carya illinoinensis HOM05D000166 ORTHO05D000812 2.8e-07 58.5 67 43.3
Haze_21749 Corylus avellana HOM05D000166 ORTHO05D000812 2.8e-07 58.5 69 47.8
Eucgr.G00040 Eucalyptus grandis HOM05D000166 ORTHO05D000812 2.8e-07 58.5 64 39.1
Psat1g201320 Pisum sativum HOM05D000166 ORTHO05D000812 2.8e-07 58.5 63 44.4
Eucgr.G00039 Eucalyptus grandis HOM05D000166 ORTHO05D000812 3.7e-07 58.2 61 41.0
Gorai.010G221900 Gossypium raimondii HOM05D000166 ORTHO05D000812 3.7e-07 58.2 61 44.3
Lsat_1_v5_gn_2_57540 Lactuca sativa HOM05D000166 ORTHO05D000812 3.7e-07 58.2 72 40.3
Lj9C242G2 Lonicera japonica HOM05D000166 ORTHO05D000812 3.7e-07 58.2 62 46.8
TAR624G1112 Trochodendron aralioides HOM05D000166 ORTHO05D000812 3.7e-07 58.2 42 52.4
CsaV3_3G043410 Cucumis sativus L. HOM05D000166 ORTHO05D000812 4.9e-07 57.8 60 46.7
Dinv29658 Davidia involucrata HOM05D000166 ORTHO05D000812 4.9e-07 57.8 69 43.5
Glyma.16G101800 Glycine max HOM05D000166 ORTHO05D000812 4.9e-07 57.8 64 46.9
Gohir.D06G189200 Gossypium hirsutum HOM05D000166 ORTHO05D000812 4.9e-07 57.8 61 44.3
Lj9A241G66 Lonicera japonica HOM05D000166 ORTHO05D000812 4.9e-07 57.8 40 57.5
Lj9C241T18 Lonicera japonica HOM05D000166 ORTHO05D000812 4.9e-07 57.8 40 55.0
QL12p025733 Quercus lobata HOM05D000166 ORTHO05D000812 4.9e-07 57.8 69 43.5
GSVIVG01023113001 Vitis vinifera HOM05D000166 ORTHO05D000812 4.9e-07 57.8 69 42.0
DCAR_001875 Daucus carota HOM05D000166 ORTHO05D000812 6.3e-07 57.4 46 47.8
Duzib192G0482 Durio zibethinus HOM05D000166 ORTHO05D000812 6.3e-07 57.4 69 40.6
VMungo0540G0373 Vigna mungo HOM05D000166 ORTHO05D000812 6.3e-07 57.4 40 57.5
Carub.0002s2650 Capsella rubella HOM05D000166 ORTHO05D000812 8.3e-07 57.0 69 42.0
Dinv24554 Davidia involucrata HOM05D000166 ORTHO05D016123 8.3e-07 57.0 36 58.3
Dinv29660 Davidia involucrata HOM05D000166 ORTHO05D000812 8.3e-07 57.0 36 58.3
PSO170G5182 Papaver somniferum HOM05D000166 ORTHO05D000812 8.3e-07 57.0 63 42.9
Solyc01g102700.4 Solanum lycopersicum HOM05D000166 ORTHO05D000812 8.3e-07 57.0 65 43.1
Sopen01g045110 Solanum pennellii HOM05D000166 ORTHO05D000812 8.3e-07 57.0 65 43.1
TAR381G1362 Trochodendron aralioides HOM05D000166 ORTHO05D000812 8.3e-07 57.0 52 44.2
Aa31LG4G1350 Aethionema arabicum HOM05D000166 ORTHO05D000812 1.1e-06 56.6 64 42.2
CARHR073350 Cardamine hirsuta HOM05D000166 ORTHO05D000812 1.1e-06 56.6 66 45.5
CiPaw.16G078200 Carya illinoinensis HOM05D000166 ORTHO05D000812 1.1e-06 56.6 66 42.4
CiPaw.16G078300 Carya illinoinensis HOM05D000166 ORTHO05D000812 1.1e-06 56.6 66 42.4
Dinv29661 Davidia involucrata HOM05D000166 ORTHO05D000812 1.1e-06 56.6 36 58.3
Migut.B00696 Erythranthe guttata HOM05D000166 ORTHO05D000812 1.1e-06 56.6 61 45.9
Zm00001eb291070 Zea mays HOM05D000166 ORTHO05D000812 1.1e-06 56.6 43 53.5
AT1G79620 Arabidopsis thaliana HOM05D000166 ORTHO05D000812 1.4e-06 56.2 69 42.0
BcaB05g25211 Brassica carinata HOM05D000166 ORTHO05D000812 1.4e-06 56.2 43 51.2
Cfa023052 Carpinus fangiana HOM05D000166 ORTHO05D000812 1.4e-06 56.2 69 46.4
Cfa023056 Carpinus fangiana HOM05D000166 ORTHO05D000812 1.4e-06 56.2 69 46.4
MBI03_g38314_MAGBIO Magnolia biondii HOM05D000166 ORTHO05D000812 1.4e-06 56.2 66 40.9
PSO017G0152 Papaver somniferum HOM05D000166 ORTHO05D000812 1.4e-06 56.2 38 52.6
Sp5g34690 Schrenkiella parvula HOM05D000166 ORTHO05D000812 1.4e-06 56.2 43 51.2
MSTRG.16451 Avicennia marina HOM05D000166 ORTHO05D000812 1.8e-06 55.8 61 44.3
ClCG10G022900 Citrullus lanatus HOM05D000166 ORTHO05D000812 1.8e-06 55.8 43 55.8
Ciclev10000176m.g Citrus clementina HOM05D000166 ORTHO05D000812 1.8e-06 55.8 70 40.0
MELO3C009089.2 Cucumis melo HOM05D000166 ORTHO05D000812 1.8e-06 55.8 43 55.8
CsaV3_3G032920 Cucumis sativus L. HOM05D000166 ORTHO05D000812 1.8e-06 55.8 43 55.8
HanXRQChr03g0070891 Helianthus annuus HOM05D000166 ORTHO05D000812 1.8e-06 55.8 69 37.7
Potri.004G232400 Populus trichocarpa HOM05D000166 ORTHO05D000812 1.8e-06 55.8 69 40.6
Sed0022518 Sechium edule HOM05D000166 ORTHO05D000812 1.8e-06 55.8 60 43.3
Ah.09g233780 Amaranthus hybridus HOM05D000166 ORTHO05D000812 2.4e-06 55.5 43 48.8
MSTRG.345 Avicennia marina HOM05D000166 ORTHO05D000812 2.4e-06 55.5 60 48.3
EL10Ac6g13949 Beta vulgaris HOM05D000166 ORTHO05D000812 2.4e-06 55.5 39 59.0
BcaC03g15914 Brassica carinata HOM05D000166 ORTHO05D000812 2.4e-06 55.5 67 40.3
BolC2t09680H Brassica oleracea HOM05D000166 ORTHO05D000812 2.4e-06 55.5 67 40.3
CAN.G1379.20 Capsicum annuum HOM05D000166 ORTHO05D000812 2.4e-06 55.5 53 45.3
Nitab4.5_0006947g0040 Nicotiana tabacum HOM05D000166 ORTHO05D000812 2.4e-06 55.5 66 37.9
PSO339G1039 Papaver somniferum HOM05D000166 ORTHO05D000812 2.4e-06 55.5 38 55.3
A02p23030 Brassica napus HOM05D000166 ORTHO05D000812 3.1e-06 55.1 67 40.3
BraA02t07300Z Brassica rapa HOM05D000166 ORTHO05D000812 3.1e-06 55.1 67 40.3
Haze_18417 Corylus avellana HOM05D000166 ORTHO05D000812 3.1e-06 55.1 67 41.8
Hund15333 Selenicereus undatus HOM05D000166 ORTHO05D000812 3.1e-06 55.1 42 54.8
SGA_v2.0_scaffold254G45214 Striga asiatica HOM05D000166 ORTHO05D000812 3.1e-06 55.1 41 48.8
GSVIVG01029829001 Vitis vinifera HOM05D000166 ORTHO05D000812 3.1e-06 55.1 38 55.3
Atru.chr8.1247 Acer truncatum HOM05D000166 ORTHO05D000812 4.1e-06 54.7 43 53.5
Ah.10g036700 Amaranthus hybridus HOM05D000166 ORTHO05D000812 4.1e-06 54.7 48 41.7
CDE04G2889 Ceratophyllum demersum HOM05D000166 ORTHO05D000812 4.1e-06 54.7 61 47.5
Gohir.A05G160200 Gossypium hirsutum HOM05D000166 ORTHO05D000812 4.1e-06 54.7 69 36.2
Gorai.009G167900 Gossypium raimondii HOM05D000166 ORTHO05D000812 4.1e-06 54.7 69 36.2
HanXRQChr06g0183121 Helianthus annuus HOM05D000166 ORTHO05D016123 4.1e-06 54.7 38 52.6
Manes.08G165600 Manihot esculenta HOM05D000166 ORTHO05D000812 4.1e-06 54.7 66 42.4
Prupe.4G230700 Prunus persica HOM05D000166 ORTHO05D000812 4.1e-06 54.7 63 39.7
AL2G40310 Arabidopsis lyrata HOM05D000166 ORTHO05D000812 5.4e-06 54.3 65 43.1
Cpa.g.sc17.28 Carica papaya HOM05D000166 ORTHO05D000812 5.4e-06 54.3 62 40.3
ECA236G1540 Erigeron canadensis HOM05D000166 ORTHO05D000812 5.4e-06 54.3 64 45.3
FAN25G2546 Fragaria x ananassa HOM05D000166 ORTHO05D000812 5.4e-06 54.3 65 38.5
Glyma.07G270700 Glycine max HOM05D000166 ORTHO05D000812 5.4e-06 54.3 62 41.9
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 5.4e-06 54.3 69 39.1
Sabra03G0020000 Salix brachista HOM05D000166 ORTHO05D000812 5.4e-06 54.3 69 39.1
THA.LOC104812406 Tarenaya hassleriana HOM05D000166 ORTHO05D000812 5.4e-06 54.3 67 41.8
HanXRQChr16g0511751 Helianthus annuus HOM05D000166 ORTHO05D000812 7.0e-06 53.9 69 36.2
PSO017G4695 Papaver somniferum HOM05D000166 ORTHO05D000812 7.0e-06 53.9 46 43.5
Potri.003G046450 Populus trichocarpa HOM05D000166 ORTHO05D000812 7.0e-06 53.9 69 37.7
Sabra01G0177800 Salix brachista HOM05D000166 ORTHO05D000812 7.0e-06 53.9 65 40.0
SEGI_36622 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 7.0e-06 53.9 63 38.1
C02p36780 Brassica napus HOM05D000166 ORTHO05D000812 9.2e-06 53.5 67 38.8
AUR62012193 Chenopodium quinoa HOM05D000166 ORTHO05D000812 9.2e-06 53.5 41 48.8
Lsat_1_v5_gn_9_81581 Lactuca sativa HOM05D000166 ORTHO05D000812 9.2e-06 53.5 43 58.1
Prupe.4G231100 Prunus persica HOM05D000166 ORTHO05D000812 9.2e-06 53.5 42 50.0
Solyc10g085670.2 Solanum lycopersicum HOM05D000166 ORTHO05D000812 9.2e-06 53.5 43 53.5
Sopen10g035090 Solanum pennellii HOM05D000166 ORTHO05D000812 9.2e-06 53.5 43 53.5
PGSC0003DMG400008403 Solanum tuberosum HOM05D000166 ORTHO05D000812 9.2e-06 53.5 43 53.5


User provided reference genes

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