Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 6.5e-158 560.8 316 100.0
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 9.1e-152 540.4 316 95.6
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 5.9e-151 537.7 316 94.6
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 7.7e-151 537.3 316 94.3
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 4.0e-139 498.4 314 86.3
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 6.4e-105 384.8 321 70.4
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 5.2e-99 365.2 328 65.9
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 1.7e-97 360.1 322 65.2
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 6.8e-91 338.2 317 63.1
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.4e-88 330.5 311 62.1
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 9.3e-88 327.8 313 61.3
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 8.1e-84 314.7 315 61.3
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 8.4e-81 304.7 293 56.7
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 1.4e-80 303.9 323 56.0
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 2.4e-80 303.1 311 58.8
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 7.1e-80 301.6 319 56.1
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 1.6e-79 300.4 318 55.0
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.1e-79 300.1 289 58.8
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 7.8e-79 298.1 318 55.3
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 2.3e-78 296.6 312 55.4
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 5.1e-78 295.4 318 55.0
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 1.3e-76 290.8 308 55.8
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.3e-76 290.8 328 57.6
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 2.1e-76 290.0 307 56.7
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 2.1e-76 290.0 314 55.4
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 3.6e-76 289.3 366 49.2
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 3.6e-76 289.3 314 55.4
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 4.8e-76 288.9 302 55.0
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 4.8e-76 288.9 260 60.8
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 8.1e-76 288.1 272 60.3
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.4e-75 286.6 317 53.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 3.1e-75 286.2 318 53.5
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.2e-74 284.3 278 57.6
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 4.5e-74 282.3 250 64.8
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 4.5e-74 282.3 250 60.4
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 4.5e-74 282.3 308 53.6
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 5.8e-74 282.0 274 59.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 2.2e-73 280.0 264 59.1
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 4.9e-73 278.9 315 54.6
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.4e-72 277.3 294 55.1
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.9e-72 276.9 313 52.1
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 2.4e-72 276.6 320 52.8
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 7.1e-72 275.0 255 60.0
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 2.1e-71 273.5 308 58.1
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 3.5e-71 272.7 261 57.1
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.0e-71 271.9 258 57.8
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 6.0e-71 271.9 258 57.8
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.0e-71 271.9 258 57.8
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 6.0e-71 271.9 261 57.1
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 6.0e-71 271.9 285 57.2
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 6.0e-71 271.9 248 60.5
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 7.9e-71 271.6 261 57.5
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.0e-70 271.2 264 57.2
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.3e-70 270.8 299 53.2
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 1.8e-70 270.4 277 54.9
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 3.9e-70 269.2 316 51.3
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 6.7e-70 268.5 259 57.5
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 6.7e-70 268.5 291 55.0
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 8.7e-70 268.1 258 56.6
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 8.7e-70 268.1 244 61.9
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 1.5e-69 267.3 276 57.6
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 2.5e-69 266.5 304 52.3
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.5e-69 266.5 327 50.2
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 7.4e-69 265.0 274 56.2
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.1e-68 263.5 318 51.3
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 3.7e-68 262.7 280 53.9
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 6.2e-68 261.9 262 55.0
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 6.2e-68 261.9 255 58.4
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 8.1e-68 261.5 253 60.9
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.4e-67 260.8 313 50.5
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 1.4e-67 260.8 323 49.2
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 2.4e-67 260.0 317 51.4
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 4.0e-67 259.2 261 55.2
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 6.9e-67 258.5 277 53.8
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 6.9e-67 258.5 281 54.8
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 7.6e-66 255.0 261 55.2
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.7e-65 253.8 257 54.9
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 1.1e-64 251.1 320 52.2
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 7.1e-64 248.4 275 54.9
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.2e-63 247.7 308 51.6
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 2.1e-63 246.9 305 49.8
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 3.5e-63 246.1 317 51.7
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 4.6e-63 245.7 324 48.8
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.9e-63 245.0 265 52.1
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 2.3e-62 243.4 246 61.4
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.5e-61 240.0 302 49.3
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.8e-60 236.5 271 49.4
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 8.2e-60 235.0 240 54.6
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.4e-59 233.4 302 49.0
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 6.9e-59 231.9 312 51.6
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 3.4e-58 229.6 245 56.3
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 1.0e-57 228.0 298 47.3
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.1e-56 224.6 287 50.5
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 5.1e-54 215.7 270 51.1
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 8.7e-54 214.9 264 49.6
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 1.9e-53 213.8 235 52.8
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.5e-50 204.1 258 49.2
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 3.2e-48 196.4 263 49.0
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.8e-46 190.7 248 50.8
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 3.3e-45 186.4 230 53.0
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 9.1e-43 178.3 185 51.9
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 2.0e-42 177.2 184 51.6
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 7.4e-37 158.7 244 41.8
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 4.5e-34 149.4 195 51.3
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 5.9e-34 149.1 235 39.1
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 2.9e-33 146.7 227 41.4
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 2.1e-31 140.6 148 50.0
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 6.7e-30 135.6 161 52.2
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 5.7e-29 132.5 250 36.8
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 1.1e-27 128.3 109 61.5
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 1.8e-22 110.9 297 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.3e-20 104.8 295 31.9
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 4.1e-19 99.8 142 39.4
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 1.6e-18 97.8 80 65.0
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 2.9e-17 93.6 156 35.3
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 3.8e-17 93.2 239 31.0
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 1.5e-13 81.3 136 39.7
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 8.3e-12 75.5 58 58.6
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 7.7e-10 68.9 230 30.4
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 2.9e-09 67.0 158 34.8


User provided reference genes

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