Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.2e-193 678.7 323 100.0
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.1e-179 633.3 354 87.6
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 2.2e-177 625.5 354 86.2
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.2e-177 625.5 354 86.2
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 7.1e-176 620.5 354 85.6
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 4.6e-159 564.7 354 78.8
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.4e-155 553.1 355 78.3
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 5.5e-144 514.6 354 72.6
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 7.9e-143 510.8 355 72.4
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 3.2e-128 462.2 347 64.8
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 3.6e-127 458.8 342 66.7
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 1.3e-126 456.8 348 64.9
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 2.3e-126 456.1 348 65.2
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 3.0e-126 455.7 347 65.7
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 1.1e-125 453.8 347 64.6
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 1.3e-124 450.3 347 64.0
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 1.8e-123 446.4 356 62.9
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 2.6e-122 442.6 347 62.5
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 3.4e-122 442.2 346 64.7
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 7.7e-122 441.0 346 63.3
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.3e-121 440.3 345 64.1
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 3.8e-121 438.7 347 63.1
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 1.1e-120 437.2 345 60.9
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 1.1e-120 437.2 344 64.0
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 1.9e-120 436.4 347 62.5
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 2.5e-120 436.0 344 63.1
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 2.5e-120 436.0 349 61.6
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 9.4e-120 434.1 345 60.9
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 9.4e-120 434.1 347 61.4
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 1.6e-119 433.3 348 62.9
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 2.7e-119 432.6 346 62.1
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 3.6e-119 432.2 357 59.9
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 4.6e-119 431.8 345 61.7
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 6.1e-119 431.4 345 61.7
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 7.9e-119 431.0 348 59.5
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 1.0e-118 430.6 345 61.4
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 5.1e-118 428.3 345 61.4
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 2.0e-117 426.4 356 59.0
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 5.7e-117 424.9 347 59.7
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 5.7e-117 424.9 346 58.7
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 2.2e-116 422.9 396 54.3
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 3.7e-116 422.2 343 60.3
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 8.2e-116 421.0 350 59.1
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 8.2e-116 421.0 315 66.7
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.4e-115 420.2 350 59.1
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 1.4e-115 420.2 342 60.2
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 2.4e-115 419.5 344 60.8
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 4.1e-115 418.7 345 59.7
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 3.4e-114 415.6 348 58.0
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 1.7e-113 413.3 345 61.4
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 2.9e-113 412.5 347 60.2
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 2.9e-113 412.5 348 58.3
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 2.9e-113 412.5 345 58.8
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 1.1e-112 410.6 346 59.8
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 3.2e-112 409.1 346 59.5
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 4.2e-112 408.7 342 59.6
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 4.2e-112 408.7 346 59.0
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 5.5e-112 408.3 345 58.8
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 9.4e-112 407.5 344 59.9
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.0e-110 404.1 345 59.4
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.3e-110 402.9 342 58.5
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 5.2e-110 401.7 351 58.1
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 6.7e-110 401.4 345 59.7
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 5.7e-109 398.3 337 59.1
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 1.7e-108 396.7 347 58.8
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.4e-107 393.7 345 58.0
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 1.4e-107 393.7 350 56.3
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.6e-106 390.2 351 53.8
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 2.0e-106 389.8 347 55.0
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 5.9e-106 388.3 345 57.4
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 7.7e-106 387.9 345 55.7
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 5.0e-105 385.2 345 57.1
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 1.1e-104 384.0 347 57.1
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 1.1e-104 384.0 345 55.7
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 1.5e-104 383.6 345 56.5
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 2.5e-104 382.9 345 55.4
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 1.2e-103 380.6 347 54.2
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 2.1e-103 379.8 345 55.4
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 6.1e-103 378.3 345 53.9
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 1.8e-102 376.7 344 54.9
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 3.0e-102 375.9 349 53.3
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 1.2e-101 374.0 349 53.9
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 1.2e-101 374.0 344 54.1
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 1.2e-101 374.0 344 54.1
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 1.2e-101 374.0 344 54.1
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 2.2e-100 369.8 346 53.2
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 6.3e-100 368.2 350 54.0
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 4.5e-98 362.1 344 53.5
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 1.3e-97 360.5 349 52.4
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 3.8e-97 359.0 349 52.7
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 1.4e-94 350.5 347 51.6
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 1.8e-94 350.1 343 52.8
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 5.7e-93 345.1 327 54.1
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 1.1e-91 340.9 352 50.3
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 3.5e-90 335.9 346 51.2
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 1.1e-88 330.9 349 50.7
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 9.5e-88 327.8 345 48.4
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 3.2e-75 286.2 319 47.3
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 1.2e-74 284.3 239 57.3
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 1.9e-72 276.9 274 49.6
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 4.9e-68 262.3 222 57.2
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 2.4e-67 260.0 218 56.4
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 1.6e-66 257.3 346 41.0
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 2.0e-66 256.9 224 56.2
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 6.0e-66 255.4 222 55.9
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 4.7e-63 245.7 220 59.5
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 6.2e-63 245.4 209 56.0
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 6.2e-63 245.4 209 56.0
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 1.8e-62 243.8 220 53.6
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 3.1e-62 243.0 209 58.4
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 2.6e-61 240.0 386 36.5
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 3.7e-60 236.1 187 64.2
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 7.1e-59 231.9 344 39.5
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.6e-58 230.7 187 63.1
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 3.5e-58 229.6 220 54.1
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 6.0e-58 228.8 222 50.9
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 6.6e-57 225.3 316 42.4
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 1.8e-54 217.2 222 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 5.2e-54 215.7 376 36.2
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 6.4e-52 208.8 221 45.7
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 1.9e-51 207.2 184 54.3
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 2.1e-39 167.2 190 47.4
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 8.1e-39 165.2 515 28.5
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 1.2e-37 161.4 126 62.7
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 1.2e-37 161.4 182 46.2
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 9.3e-35 151.8 203 41.9
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 2.0e-29 134.0 104 59.6
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 9.9e-29 131.7 141 53.2
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 5.5e-27 125.9 108 57.4
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 2.7e-26 123.6 78 74.4
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 6.0e-26 122.5 425 27.1
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 1.0e-25 121.7 403 26.1
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 2.1e-23 114.0 85 56.5
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 8.2e-23 112.1 67 76.1
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.1e-19 101.7 100 54.0
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 1.9e-19 100.9 348 29.6
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 2.5e-16 90.5 98 49.0


User provided reference genes

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