Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1485 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.2e-128 462.2 226 100.0
FAN08G2279 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.6e-102 375.2 342 62.0
FAN18G1345 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.0e-92 342.8 339 59.0
FAN04G0512 Fragaria x ananassa HOM05D009201 ORTHO05D005238 4.6e-81 305.1 192 82.3
RcHm_v2.0_Chr1g0320861 Rosa chinensis HOM05D009201 ORTHO05D005238 1.6e-57 226.9 161 67.1
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 3.0e-48 196.1 188 53.7
FAN08G0305 Fragaria x ananassa HOM05D009201 ORTHO05D005238 5.7e-47 191.8 188 52.1
FvH4_3g26062 Fragaria vesca HOM05D009201 ORTHO05D005238 6.3e-46 188.3 186 50.5
FAN14G1768 Fragaria x ananassa HOM05D009201 ORTHO05D005238 3.9e-40 169.1 188 49.5
FAN17G0650 Fragaria x ananassa HOM05D009201 ORTHO05D005238 9.4e-34 147.9 144 54.9
FvH4_6g26370 Fragaria vesca HOM05D009201 ORTHO05D035607 2.6e-31 139.8 158 47.5
FvH4_3g25832 Fragaria vesca HOM05D009201 ORTHO05D005238 2.2e-27 126.7 187 41.7
RcHm_v2.0_Chr3g0472781 Rosa chinensis HOM05D009201 ORTHO05D005238 5.0e-27 125.6 95 58.9
FvH4_5g38943 Fragaria vesca HOM05D007432 ORTHO05D005238 7.2e-26 121.7 145 44.8
FAN19G3080 Fragaria x ananassa HOM05D009150 ORTHO05D005238 6.1e-25 118.6 160 36.9
FvH4_2g13681 Fragaria vesca HOM05D009201 ORTHO05D005238 3.0e-24 116.3 99 60.6
FvH4_6g05152 Fragaria vesca HOM05D007432 ORTHO05D005238 6.7e-24 115.2 147 42.2
FvH4_4g08041 Fragaria vesca HOM05D009201 ORTHO05D005238 2.6e-23 113.2 255 32.2
FAN14G0817 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.3e-22 110.9 147 41.5
FvH4_5g23680 Fragaria vesca HOM05D018539 ORTHO05D005238 6.3e-22 108.6 116 44.0
FAN22G0097 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.1e-21 107.8 145 42.8
FAN18G3942 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.1e-21 105.9 159 35.2
FvH4_4g16721 Fragaria vesca HOM05D009201 ORTHO05D005238 1.2e-20 104.4 188 35.1
FvH4_4g21881 Fragaria vesca HOM05D009201 ORTHO05D005238 1.2e-20 104.4 155 41.9
FAN03G2305 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.2e-20 104.4 160 35.0
FAN07G0659 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.7e-20 103.2 152 37.5
FAN12G1939 Fragaria x ananassa HOM05D009201 ORTHO05D005238 5.9e-20 102.1 188 35.1
FAN18G2146 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.9e-19 99.8 147 38.1
FvH4_3g18871 Fragaria vesca HOM05D007432 ORTHO05D005238 5.0e-19 99.0 147 36.7
FvH4_1g22101 Fragaria vesca HOM05D009150 ORTHO05D005238 8.5e-19 98.2 127 33.9
FAN11G2026 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.5e-18 97.4 147 36.7
FAN09G1180 Fragaria x ananassa HOM05D009150 ORTHO05D005238 1.6e-17 94.0 89 40.4
FAN21G3598 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.7e-17 92.4 158 35.4
FAN23G1579 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.3e-16 90.1 171 35.7
FvH4_3g20011 Fragaria vesca HOM05D018539 ORTHO05D025542 5.2e-16 89.0 145 37.2
FvH4_3g10870 Fragaria vesca HOM05D007432 ORTHO05D005238 2.6e-15 86.7 136 35.3
FAN05G2877 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.7e-15 85.5 130 36.9
FvH4_5g15791 Fragaria vesca HOM05D007432 ORTHO05D005238 9.8e-15 84.7 147 37.4
FvH4_2g07920 Fragaria vesca HOM05D007432 ORTHO05D005238 1.7e-14 84.0 129 37.2
FvH4_2g14491 Fragaria vesca HOM05D007432 ORTHO05D005238 2.2e-14 83.6 132 35.6
FAN16G2433 Fragaria x ananassa HOM05D045573 ORTHO05D035868 2.2e-14 83.6 67 61.2
FAN20G1730 Fragaria x ananassa HOM05D007432 ORTHO05D005238 8.3e-14 81.6 91 39.6
FAN17G0381 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.1e-13 81.3 188 30.9
FvH4_2g06802 Fragaria vesca HOM05D007432 ORTHO05D005238 1.4e-13 80.9 152 31.6
FAN03G0184 Fragaria x ananassa HOM05D007432 ORTHO05D005238 7.0e-13 78.6 149 32.2
FAN06G2363 Fragaria x ananassa HOM05D007432 ORTHO05D005238 9.1e-13 78.2 113 39.8
FAN16G3690 Fragaria x ananassa HOM05D009150 ORTHO05D005238 9.1e-13 78.2 122 36.1
FAN25G2326 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.6e-12 77.4 120 35.8
FAN05G1869 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.0e-12 77.0 124 36.3
FAN25G3030 Fragaria x ananassa HOM05D045573 ORTHO05D035868 3.5e-12 76.3 67 56.7
FvH4_2g07851 Fragaria vesca HOM05D007432 ORTHO05D005238 7.7e-12 75.1 115 37.4
FvH4_6g31722 Fragaria vesca HOM05D009150 ORTHO05D005238 5.0e-11 72.4 159 29.6
FAN15G2286 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.0e-11 72.4 148 31.8
FAN24G0744 Fragaria x ananassa HOM05D007432 ORTHO05D005238 6.5e-11 72.0 107 38.3
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-10 71.2 125 30.4
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-10 71.2 167 27.5
RcHm_v2.0_Chr7g0243191 Rosa chinensis HOM05D007432 ORTHO05D005238 1.1e-10 71.2 105 39.0
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 1.5e-10 70.9 159 29.6
FvH4_6g14353 Fragaria vesca HOM05D007432 ORTHO05D005238 2.5e-10 70.1 67 47.8
FAN14G1548 Fragaria x ananassa HOM05D007432 ORTHO05D005238 2.5e-10 70.1 67 47.8
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 3.2e-10 69.7 162 28.4
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-09 67.8 189 28.0
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.2e-09 67.8 162 27.8
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.7e-09 65.9 94 31.9
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 8.0e-09 65.1 107 29.9
FAN09G0991 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.4e-08 64.3 93 36.6
FAN09G4175 Fragaria x ananassa HOM05D009201 ORTHO05D005238 1.4e-08 64.3 189 29.1
Lj4g0023781 Lotus japonicus HOM05D000003 ORTHO05D000126 1.4e-08 64.3 110 30.9
FAN26G2577 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.8e-08 63.9 152 30.9
FAN02G1102 Fragaria x ananassa HOM05D009201 ORTHO05D005238 2.3e-08 63.5 96 40.6
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.3e-08 63.5 164 28.0
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.3e-08 63.5 166 28.3
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 2.3e-08 63.5 155 27.1
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 4.0e-08 62.8 130 28.5
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 5.2e-08 62.4 185 27.6
Lj4g0023032 Lotus japonicus HOM05D000003 ORTHO05D000126 5.2e-08 62.4 133 30.1
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 6.8e-08 62.0 81 35.8
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.8e-08 62.0 173 27.2
FAN27G1221 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.8e-08 61.6 83 33.7
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 8.8e-08 61.6 147 26.5
RcHm_v2.0_Chr7g0191711 Rosa chinensis HOM05D000031 ORTHO05D000030 8.8e-08 61.6 75 42.7
CANSAT01G1830 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-07 61.2 142 26.8
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 1.2e-07 61.2 150 25.3
FvH4_6g30881 Fragaria vesca HOM05D007432 ORTHO05D005238 1.2e-07 61.2 126 36.5
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 1.2e-07 61.2 166 28.3
RcHm_v2.0_Chr6g0288921 Rosa chinensis HOM05D009201 ORTHO05D035868 1.2e-07 61.2 111 38.7
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.2e-07 61.2 156 23.1
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-07 60.8 102 31.4
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-07 60.8 151 23.2
FAN15G2525 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.5e-07 60.8 130 24.6
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.5e-07 60.8 154 23.4
CANSAT25G1596 Cannabis sativa HOM05D000003 ORTHO05D000126 2.6e-07 60.1 141 27.7
COL.COLO4_29419 Corchorus olitorius HOM05D012333 ORTHO05D000126 3.4e-07 59.7 143 29.4
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 3.4e-07 59.7 86 33.7
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-07 59.7 151 23.2
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 3.4e-07 59.7 73 39.7
FAN10G3952 Fragaria x ananassa HOM05D009150 ORTHO05D005238 4.4e-07 59.3 69 34.8
RcHm_v2.0_Chr7g0238801 Rosa chinensis HOM05D009201 ORTHO05D005238 4.4e-07 59.3 65 50.8
CANSAT01G2836 Cannabis sativa HOM05D000003 ORTHO05D000126 5.7e-07 58.9 121 29.8
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.7e-07 58.9 136 23.5
CANSAT35G1890 Cannabis sativa HOM05D000003 ORTHO05D000126 7.5e-07 58.5 141 27.7
CANSAT54G2916 Cannabis sativa HOM05D000003 ORTHO05D000126 7.5e-07 58.5 141 27.7
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 7.5e-07 58.5 83 33.7
FAN07G0316 Fragaria x ananassa HOM05D008119 ORTHO05D010214 9.8e-07 58.2 107 27.1
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 9.8e-07 58.2 73 32.9
Atru.chr3.1630 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 57.8 126 25.4
Atru.chr8.1207 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 57.8 153 29.4
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.3e-06 57.8 137 29.9
FAN16G3622 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.3e-06 57.8 72 33.3
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.3e-06 57.8 142 22.5
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 1.3e-06 57.8 89 34.8
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-06 57.4 162 24.1
FAN22G1077 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.7e-06 57.4 124 25.0
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.7e-06 57.4 114 27.2
FAN08G2294 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.2e-06 57.0 111 28.8
FAN23G0604 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.2e-06 57.0 101 26.7
Rhsim04G0150700 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-06 57.0 144 20.8
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.8e-06 56.6 137 29.2
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 2.8e-06 56.6 139 23.0
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.8e-06 56.6 111 27.0
FAN16G2111 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.8e-06 56.6 81 28.4
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-06 56.6 84 33.3
QL04p065089 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-06 56.6 125 24.0
FAN26G1926 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.7e-06 56.2 91 29.7
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.7e-06 56.2 143 25.9
Haze_12571 Corylus avellana HOM05D000003 ORTHO05D000126 4.9e-06 55.8 128 27.3
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.9e-06 55.8 91 27.5
FAN16G2163 Fragaria x ananassa HOM05D007432 ORTHO05D005238 4.9e-06 55.8 66 40.9
RcHm_v2.0_Chr2g0109251 Rosa chinensis HOM05D009201 ORTHO05D005238 4.9e-06 55.8 31 77.4
Atru.chr7.549 Acer truncatum HOM05D000003 ORTHO05D000126 6.3e-06 55.5 125 29.6
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 6.3e-06 55.5 152 25.0
FAN12G4356 Fragaria x ananassa HOM05D008119 ORTHO05D010214 6.3e-06 55.5 111 25.2
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.3e-06 55.1 121 24.8
CANSAT56G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 8.3e-06 55.1 138 26.1
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.3e-06 55.1 103 26.2
FAN03G0285 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.3e-06 55.1 126 32.5
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 8.3e-06 55.1 142 22.5


User provided reference genes

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