Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 7.5e-129 463.8 220 100.0
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 7.4e-92 340.9 188 88.3
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 8.1e-91 337.4 200 83.0
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 2.9e-88 328.9 187 86.1
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 5.5e-87 324.7 180 86.7
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.9e-85 318.5 180 86.1
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 3.3e-84 315.5 180 85.6
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 1.2e-81 307.0 188 81.9
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 2.6e-81 305.8 170 85.9
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.5e-76 290.0 160 87.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 4.3e-76 288.5 160 86.9
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 8.2e-75 284.3 196 72.4
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 8.2e-75 284.3 196 72.4
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 8.2e-75 284.3 196 72.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-71 271.6 154 84.4
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 1.0e-69 267.3 226 63.3
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 3.0e-69 265.8 211 65.9
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-67 259.2 186 70.4
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-67 259.2 186 70.4
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-67 259.2 186 70.4
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 3.4e-65 252.3 216 62.0
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-62 242.3 193 66.3
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-57 226.1 154 73.4
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 6.1e-54 214.9 188 61.2
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 7.9e-54 214.5 108 90.7
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.4e-53 213.8 109 91.7
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.7e-51 205.7 160 66.2
Sc09g0006440 Simmondsia chinensis HOM05D000963 ORTHO05D010073 9.1e-50 201.1 109 87.2
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-49 200.7 154 66.2
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-49 200.7 154 66.2
FAN20G2381 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.8e-48 195.7 92 96.7
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 2.5e-47 193.0 154 64.3
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 9.7e-44 181.0 90 91.1
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 9.7e-44 181.0 107 81.3
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.2e-41 174.1 107 79.4
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 4.5e-41 172.2 117 76.1
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.9e-40 169.5 143 60.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.2e-39 165.6 95 81.1
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.2e-39 165.6 95 81.1
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 2.1e-38 163.3 77 94.8
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 2.1e-38 163.3 151 58.9
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 2.7e-38 162.9 80 92.5
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 6.1e-38 161.8 145 58.6
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.0e-37 161.0 79 93.7
arahy.Tifrunner.gnm1.ann1.FXQ5AB Arachis hypogaea HOM05D000963 ORTHO05D010073 4.0e-37 159.1 188 53.2
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 3.7e-35 152.5 107 72.0
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 8.3e-35 151.4 68 97.1
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.4e-34 150.6 71 95.8
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 4.1e-34 149.1 71 94.4
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 7.0e-34 148.3 91 78.0
Oeu029257.1 Olea europaea HOM05D000963 ORTHO05D010073 5.0e-32 142.1 130 60.0
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 6.5e-32 141.7 73 86.3
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 9.5e-31 137.9 118 61.9
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.4e-29 134.0 71 85.9
Oeu010687.1 Olea europaea HOM05D000963 ORTHO05D010073 5.2e-29 132.1 127 58.3
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 1.2e-28 131.0 71 84.5
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.6e-28 129.8 60 95.0
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 2.2e-27 126.7 71 84.5
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 3.1e-26 122.9 145 50.3
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 9.2e-26 121.3 88 73.9
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 4.5e-25 119.0 148 47.3
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.9e-24 116.3 61 88.5
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 5.0e-24 115.5 75 74.7
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.5e-23 114.0 61 85.2
Cpa.g.sc163.10 Carica papaya HOM05D000963 ORTHO05D010073 2.5e-23 113.2 60 90.0
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-22 110.9 52 94.2
TPR.G7250 Trifolium pratense HOM05D000963 ORTHO05D026921 5.2e-21 105.5 119 51.3
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 5.7e-20 102.1 75 69.3
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 5.7e-20 102.1 75 69.3
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.7e-20 102.1 65 73.8
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.7e-20 102.1 65 73.8
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 1.7e-19 100.5 56 83.9
Phvul.008G179700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 2.9e-19 99.8 44 97.7
unitig_91.g26526 Utricularia gibba HOM05D000963 ORTHO05D010073 6.4e-19 98.6 55 87.3
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 3.2e-18 96.3 71 67.6
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 9.2e-18 94.7 49 81.6
Phvul.002G181700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 4.6e-17 92.4 71 66.2
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.6e-17 92.4 167 40.1
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.6e-17 92.4 167 40.1
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.6e-17 92.4 167 40.1
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.6e-17 92.4 167 40.1
arahy.Tifrunner.gnm1.ann1.RD3GDK Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-15 87.8 45 86.7
arahy.Tifrunner.gnm1.ann1.TWTI07 Arachis hypogaea HOM05D000963 ORTHO05D026921 2.5e-15 86.7 117 47.9
Migut.D01381 Erythranthe guttata HOM05D000963 ORTHO05D010073 3.6e-14 82.8 71 62.0
Medtr1g039020 Medicago truncatula HOM05D000963 ORTHO05D010073 4.7e-14 82.4 44 84.1
SGA_v2.0_scaffold222G42797 Striga asiatica HOM05D000963 ORTHO05D010073 1.0e-13 81.3 73 61.6
TPR.G13983 Trifolium pratense HOM05D000963 ORTHO05D010073 1.4e-13 80.9 46 82.6
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.0e-13 79.3 120 42.5
AL1G35170 Arabidopsis lyrata HOM05D007117 ORTHO05D000038 2.6e-12 76.6 41 85.4
Nitab4.5_0006727g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010073 1.7e-11 73.9 38 89.5
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 1.1e-10 71.2 33 93.9
Gorai.005G170500 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.4e-10 70.9 55 65.5
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 7.0e-10 68.6 36 83.3
Gorai.011G264900 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.2e-09 67.8 32 87.5
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 3.5e-09 66.2 147 36.7
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 4.6e-09 65.9 45 68.9
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 6.0e-09 65.5 56 62.5
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 2.3e-08 63.5 66 54.5
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 2.3e-08 63.5 66 54.5
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 2.3e-08 63.5 56 58.9
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 1.1e-07 61.2 56 58.9
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.9e-07 60.5 82 46.3
Sopen10g009710 Solanum pennellii HOM05D000014 ORTHO05D000093 2.5e-07 60.1 56 58.9
ClCG04G002950 Citrullus lanatus HOM05D000963 ORTHO05D010073 7.3e-07 58.5 26 88.5
arahy.Tifrunner.gnm1.ann1.U9SLDS Arachis hypogaea HOM05D000963 ORTHO05D010073 1.6e-06 57.4 40 67.5
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.1e-06 57.0 29 86.2
Lj5C62G3 Lonicera japonica HOM05D003101 ORTHO05D003550 2.8e-06 56.6 27 88.9
SEGI_30283 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.7e-06 55.8 77 46.8


User provided reference genes

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