Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.5e-75 286.2 155 100.0
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.6e-72 276.2 155 92.9
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.5e-70 269.6 155 93.5
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 2.1e-69 265.8 155 93.5
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.1e-69 265.8 155 91.6
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 1.8e-60 236.1 155 78.7
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 2.4e-52 209.1 158 67.7
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 6.6e-47 191.0 156 63.5
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.4e-44 183.3 165 62.4
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 3.1e-44 182.2 164 63.4
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 7.6e-43 177.6 162 63.0
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 1.7e-42 176.4 159 57.9
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 2.9e-42 175.6 165 56.4
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.2e-41 171.8 159 57.2
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 4.2e-41 171.8 160 55.6
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 5.4e-41 171.4 160 55.6
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 7.1e-41 171.0 159 54.7
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 9.3e-41 170.6 160 55.6
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 3.5e-40 168.7 159 56.0
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 6.0e-40 167.9 171 59.1
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 1.3e-39 166.8 158 59.5
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 3.9e-39 165.2 159 59.7
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 8.7e-39 164.1 160 54.4
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 1.5e-38 163.3 159 50.9
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 3.3e-38 162.2 154 56.5
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 7.3e-38 161.0 160 60.0
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 2.1e-37 159.5 197 48.2
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 2.1e-37 159.5 159 54.1
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 2.8e-37 159.1 162 54.9
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.8e-37 159.1 159 53.5
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.8e-37 158.3 161 53.4
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.8e-37 158.3 161 53.4
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 8.1e-37 157.5 159 55.3
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 8.1e-37 157.5 171 50.9
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 1.4e-36 156.8 161 55.3
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.8e-36 156.4 165 58.2
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 1.8e-36 156.4 159 50.3
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 2.4e-36 156.0 159 51.6
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.4e-36 156.0 159 59.1
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 2.4e-36 156.0 159 52.2
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 3.1e-36 155.6 159 50.9
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.0e-36 155.2 159 49.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 5.3e-36 154.8 159 49.7
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 9.0e-36 154.1 159 52.2
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 2.6e-35 152.5 144 63.9
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 3.4e-35 152.1 158 54.4
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.5e-35 151.8 155 52.3
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 5.8e-35 151.4 161 47.2
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 5.8e-35 151.4 160 53.1
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 5.8e-35 151.4 163 50.3
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 5.8e-35 151.4 168 54.8
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 7.6e-35 151.0 159 53.5
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 7.6e-35 151.0 159 53.5
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 9.9e-35 150.6 159 50.9
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 3.8e-34 148.7 164 50.6
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 8.4e-34 147.5 161 52.8
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 8.4e-34 147.5 163 49.1
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 1.1e-33 147.1 157 53.5
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.9e-33 146.4 158 49.4
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.2e-33 145.6 160 50.0
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 3.2e-33 145.6 159 48.4
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 4.2e-33 145.2 161 51.6
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 7.1e-33 144.4 162 51.9
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 7.1e-33 144.4 163 47.9
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 9.3e-33 144.1 159 49.1
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 9.3e-33 144.1 170 48.8
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 9.3e-33 144.1 155 54.2
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 9.3e-33 144.1 158 51.3
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 9.3e-33 144.1 160 47.5
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.6e-32 143.3 168 55.4
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 3.5e-32 142.1 159 49.1
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 3.5e-32 142.1 154 58.4
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.3e-31 140.2 155 47.7
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.3e-31 140.2 164 47.0
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.3e-31 140.2 160 47.5
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.8e-31 139.8 160 46.9
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 3.0e-31 139.0 155 47.1
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 3.0e-31 139.0 153 47.1
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 3.9e-31 138.7 166 45.2
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 3.9e-31 138.7 155 47.7
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 6.7e-31 137.9 161 55.3
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.1e-30 137.1 155 47.1
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 1.5e-30 136.7 223 41.3
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 2.5e-30 136.0 155 46.5
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 2.5e-30 136.0 150 49.3
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 2.5e-30 136.0 244 42.2
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 2.5e-30 136.0 163 47.9
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.3e-30 135.2 155 46.5
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 9.6e-30 134.0 200 41.5
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 1.3e-29 133.7 155 45.8
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 2.1e-29 132.9 164 45.1
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 2.8e-29 132.5 161 48.4
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 4.8e-29 131.7 192 39.6
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 8.1e-29 131.0 161 47.8
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 1.4e-28 130.2 193 39.4
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 1.8e-28 129.8 162 46.9
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 2.4e-28 129.4 162 45.1
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 4.0e-28 128.6 267 34.1
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 9.0e-28 127.5 158 43.7
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.2e-27 127.1 165 46.7
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 2.0e-27 126.3 162 43.2
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 2.6e-27 125.9 159 42.8
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 4.5e-27 125.2 162 45.1
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.0e-26 124.0 155 43.2
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.0e-26 124.0 158 45.6
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 2.9e-26 122.5 114 59.6
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 3.8e-26 122.1 162 44.4
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 3.8e-26 122.1 163 44.8
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 3.8e-26 122.1 111 55.9
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.4e-25 120.2 161 39.8
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.4e-25 120.2 161 39.8
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 4.2e-25 118.6 149 48.3
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 4.2e-25 118.6 152 43.4
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 1.6e-24 116.7 152 42.8
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 1.6e-24 116.7 155 45.8
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 2.1e-24 116.3 156 46.2
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 2.1e-24 116.3 219 41.6
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 2.7e-24 115.9 153 43.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.5e-24 115.5 107 53.3
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 4.6e-24 115.2 146 47.3
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 6.0e-24 114.8 151 43.7
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 7.9e-24 114.4 142 43.7
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 7.9e-24 114.4 152 42.8
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.3e-23 112.8 163 49.7
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 2.3e-23 112.8 143 44.8
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 3.9e-23 112.1 105 50.5
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 3.9e-23 112.1 111 52.3
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 8.7e-23 110.9 149 45.0
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 8.7e-23 110.9 151 40.4
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.5e-22 110.2 151 41.7
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.5e-22 110.2 151 41.7
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 2.5e-22 109.4 149 44.3
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 2.5e-22 109.4 149 44.3
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 4.3e-22 108.6 160 41.2
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 2.1e-21 106.3 105 51.4
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 3.7e-21 105.5 105 51.4
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.8e-20 103.2 81 65.4
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 3.1e-20 102.4 112 50.0
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.0e-20 102.1 179 34.1
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 1.3e-18 97.1 159 38.4
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 6.5e-18 94.7 164 36.0
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.5e-17 92.8 79 60.8
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 7.9e-16 87.8 81 54.3
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 1.3e-15 87.0 156 37.8
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 3.0e-15 85.9 88 51.1
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 5.1e-15 85.1 80 50.0
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.6e-13 80.1 73 54.8
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 6.3e-13 78.2 109 41.3
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 1.4e-12 77.0 72 56.9
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.5e-11 72.0 77 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 4.5e-11 72.0 111 40.5
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 8.5e-10 67.8 80 43.8
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 8.5e-10 67.8 77 42.9
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 1.9e-09 66.6 87 51.7
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 2.5e-09 66.2 92 40.2
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 4.2e-09 65.5 88 47.7
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 7.9e-08 61.2 92 37.0
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 1.5e-06 57.0 34 73.5


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