Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1097 Fragaria x ananassa HOM05D001428 ORTHO05D001306 8.3e-37 156.8 93 100.0
FvH4_5g01690 Fragaria vesca HOM05D001428 ORTHO05D001306 4.3e-25 117.9 76 98.7
FAN18G3706 Fragaria x ananassa HOM05D001428 ORTHO05D001306 4.3e-25 117.9 76 98.7
FAN08G1622 Fragaria x ananassa HOM05D001428 ORTHO05D001306 1.6e-24 115.9 76 78.9
RcHm_v2.0_Chr7g0199031 Rosa chinensis HOM05D001428 ORTHO05D001306 8.4e-21 103.6 76 71.1
MD02G1069300 Malus domestica HOM05D001428 ORTHO05D001306 4.4e-14 81.3 84 53.6
RcHm_v2.0_Chr2g0092361 Rosa chinensis HOM05D001428 ORTHO05D001306 5.8e-14 80.9 85 52.9
Prupe.7G216300 Prunus persica HOM05D001428 ORTHO05D001306 2.2e-13 79.0 84 51.2
FAN23G1461 Fragaria x ananassa HOM05D001428 ORTHO05D001306 3.8e-13 78.2 86 47.7
FvH4_1g06630 Fragaria vesca HOM05D001428 ORTHO05D001306 4.9e-13 77.8 71 66.2
FAN19G2272 Fragaria x ananassa HOM05D001428 ORTHO05D001306 4.9e-13 77.8 71 66.2
Ciclev10008962m.g Citrus clementina HOM05D001428 ORTHO05D001306 2.4e-12 75.5 80 55.0
MD15G1201000 Malus domestica HOM05D001428 ORTHO05D001306 5.4e-12 74.3 84 47.6
Atru.chr7.1511 Acer truncatum HOM05D001428 ORTHO05D001306 7.1e-12 73.9 80 52.5
Sopen12g003590 Solanum pennellii HOM05D001428 ORTHO05D001306 3.5e-11 71.6 79 48.1
FAN26G0262 Fragaria x ananassa HOM05D001428 ORTHO05D001306 4.6e-11 71.2 86 60.5
FAN26G1780 Fragaria x ananassa HOM05D001428 ORTHO05D001306 4.6e-11 71.2 86 60.5
Eucgr.C00949 Eucalyptus grandis HOM05D001428 ORTHO05D001306 1.0e-10 70.1 79 53.2
Solyc12g008650.2 Solanum lycopersicum HOM05D001428 ORTHO05D001306 1.3e-10 69.7 79 46.8
PGSC0003DMG401000287 Solanum tuberosum HOM05D001428 ORTHO05D001306 2.3e-10 68.9 79 45.6
COL.COLO4_18266 Corchorus olitorius HOM05D001428 ORTHO05D001306 3.0e-10 68.6 79 50.6
Peaxi162Scf00944g00145 Petunia axillaris HOM05D001428 ORTHO05D001306 3.0e-10 68.6 78 47.4
Gohir.D06G068200 Gossypium hirsutum HOM05D001428 ORTHO05D001306 3.9e-10 68.2 79 49.4
Gorai.010G079700 Gossypium raimondii HOM05D001428 ORTHO05D001306 3.9e-10 68.2 79 49.4
arahy.Tifrunner.gnm1.ann1.Z1CJI9 Arachis hypogaea HOM05D001428 ORTHO05D001306 5.1e-10 67.8 80 46.2
arahy.Tifrunner.gnm1.ann1.ELH53L Arachis hypogaea HOM05D001428 ORTHO05D001306 6.6e-10 67.4 80 46.2
Nitab4.5_0004011g0010 Nicotiana tabacum HOM05D001428 ORTHO05D001306 6.6e-10 67.4 79 50.6
CiPaw.03G220800 Carya illinoinensis HOM05D001428 ORTHO05D001306 8.7e-10 67.0 81 48.1
Gohir.A06G069600 Gossypium hirsutum HOM05D001428 ORTHO05D001306 1.1e-09 66.6 79 46.8
Duzib150G0875 Durio zibethinus HOM05D001428 ORTHO05D001306 1.5e-09 66.2 79 48.1
Cpa.g.sc78.51 Carica papaya HOM05D001428 ORTHO05D001306 1.9e-09 65.9 77 49.4
Duzib168G2400 Durio zibethinus HOM05D001428 ORTHO05D001306 1.9e-09 65.9 79 46.8
Nitab4.5_0017035g0010 Nicotiana tabacum HOM05D001428 ORTHO05D001306 1.9e-09 65.9 79 51.9
Thecc.09G096300 Theobroma cacao HOM05D001428 ORTHO05D001306 2.5e-09 65.5 79 48.1
Cfa003148 Carpinus fangiana HOM05D001428 ORTHO05D001306 4.3e-09 64.7 80 45.0
CSS0039235 Camellia sinensis var. sinensis HOM05D001428 ORTHO05D001306 5.6e-09 64.3 79 46.8
Hma1.2p1_0663F.1_g198560 Hydrangea macrophylla HOM05D001428 ORTHO05D001306 5.6e-09 64.3 80 47.5
GSVIVG01015266001 Vitis vinifera HOM05D001428 ORTHO05D001306 5.6e-09 64.3 77 48.1
Phvul.002G306200 Phaseolus vulgaris HOM05D001428 ORTHO05D001306 7.3e-09 63.9 81 48.1
Sabra18G0061000 Salix brachista HOM05D001428 ORTHO05D001306 1.3e-08 63.2 76 46.1
Dinv42276 Davidia involucrata HOM05D001428 ORTHO05D001306 1.6e-08 62.8 79 44.3
Medtr8g102150 Medicago truncatula HOM05D001428 ORTHO05D001306 1.6e-08 62.8 80 45.0
PGR142G0726 Punica granatum HOM05D001428 ORTHO05D001306 2.1e-08 62.4 79 43.0
Actinidia25287 Actinidia chinensis HOM05D001428 ORTHO05D001306 2.8e-08 62.0 80 45.0
CANSAT56G0388 Cannabis sativa HOM05D001428 ORTHO05D001306 4.8e-08 61.2 78 47.4
Lj2g0020184 Lotus japonicus HOM05D001428 ORTHO05D001306 4.8e-08 61.2 82 45.1
Sed0010380 Sechium edule HOM05D001428 ORTHO05D001306 6.2e-08 60.8 77 48.1
TPR.G35156 Trifolium pratense HOM05D001428 ORTHO05D001306 6.2e-08 60.8 80 47.5
Manes.16G106200 Manihot esculenta HOM05D001428 ORTHO05D001306 8.1e-08 60.5 79 46.8
CSS0015365 Camellia sinensis var. sinensis HOM05D001428 ORTHO05D001306 1.1e-07 60.1 79 44.3
CANSAT56G0167 Cannabis sativa HOM05D001428 ORTHO05D001306 1.1e-07 60.1 78 46.2
Thecc.02G311000 Theobroma cacao HOM05D001428 ORTHO05D001306 1.4e-07 59.7 79 41.8
Cc06_g10840 Coffea canephora HOM05D001428 ORTHO05D001306 1.8e-07 59.3 81 45.7
ECA236G0918 Erigeron canadensis HOM05D001428 ORTHO05D001306 1.8e-07 59.3 81 42.0
Nitab4.5_0001781g0220 Nicotiana tabacum HOM05D001428 ORTHO05D001306 1.8e-07 59.3 79 46.8
Potri.018G069700 Populus trichocarpa HOM05D001428 ORTHO05D001306 1.8e-07 59.3 76 46.1
Lsat_1_v5_gn_8_88321 Lactuca sativa HOM05D001428 ORTHO05D001306 2.4e-07 58.9 58 55.2
VMungo0251G1405 Vigna mungo HOM05D001428 ORTHO05D001306 2.4e-07 58.9 81 46.9
CSS0008033 Camellia sinensis var. sinensis HOM05D001428 ORTHO05D001306 3.1e-07 58.5 79 43.0
ClCG03G015960 Citrullus lanatus HOM05D001428 ORTHO05D001306 3.1e-07 58.5 79 43.0
CsaV3_1G040000 Cucumis sativus L. HOM05D001428 ORTHO05D001306 4.0e-07 58.2 79 45.6
Dinv36706 Davidia involucrata HOM05D001428 ORTHO05D001306 4.0e-07 58.2 68 51.5
Lj7A669T62 Lonicera japonica HOM05D001428 ORTHO05D001306 4.0e-07 58.2 79 43.0
arahy.Tifrunner.gnm1.ann1.M1XV77 Arachis hypogaea HOM05D001428 ORTHO05D001306 5.3e-07 57.8 76 40.8
Psat7g019040 Pisum sativum HOM05D001428 ORTHO05D001306 5.3e-07 57.8 79 43.0
Sc12g0010030 Simmondsia chinensis HOM05D001428 ORTHO05D001306 6.9e-07 57.4 83 41.0
arahy.Tifrunner.gnm1.ann1.6E02AJ Arachis hypogaea HOM05D001428 ORTHO05D001306 1.2e-06 56.6 82 39.0
Ca_17381_v3 Cicer arietinum L. HOM05D001428 ORTHO05D001306 1.2e-06 56.6 69 44.9
TWI34G0963 Tripterygium wilfordii HOM05D001428 ORTHO05D001306 1.2e-06 56.6 80 45.0
Aa31LG3G610 Aethionema arabicum HOM05D001428 ORTHO05D001306 1.5e-06 56.2 74 44.6
Haze_25855 Corylus avellana HOM05D001428 ORTHO05D001306 1.5e-06 56.2 56 51.8
Eucgr.G02560 Eucalyptus grandis HOM05D001428 ORTHO05D001306 2.0e-06 55.8 78 43.6
EL10Ac8g18339 Beta vulgaris HOM05D001428 ORTHO05D001306 2.6e-06 55.5 81 43.2
Nn6g35367 Nelumbo nucifera HOM05D001428 ORTHO05D001306 2.6e-06 55.5 80 41.2
AUR62033267 Chenopodium quinoa HOM05D001428 ORTHO05D001306 3.4e-06 55.1 81 45.7
HanXRQChr06g0172121 Helianthus annuus HOM05D001428 ORTHO05D001306 3.4e-06 55.1 80 45.0
Oeu000338.1 Olea europaea HOM05D001428 ORTHO05D001306 4.4e-06 54.7 66 47.0
QL02p040350 Quercus lobata HOM05D001428 ORTHO05D001306 4.4e-06 54.7 79 41.8
AT4G26260 Arabidopsis thaliana HOM05D001428 ORTHO05D001306 5.8e-06 54.3 79 43.0
MBI01_g35897_MAGBIO Magnolia biondii HOM05D001428 ORTHO05D001306 5.8e-06 54.3 79 38.0
TWI32G0361 Tripterygium wilfordii HOM05D001428 ORTHO05D001306 5.8e-06 54.3 79 40.5
Migut.J01074 Erythranthe guttata HOM05D001428 ORTHO05D001306 7.6e-06 53.9 77 46.8
Glyma.05G224500 Glycine max HOM05D001428 ORTHO05D001306 7.6e-06 53.9 57 49.1


User provided reference genes

Program Settings