Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1083 Fragaria x ananassa HOM05D007271 ORTHO05D000013 8.8e-50 199.9 96 100.0
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 2.0e-25 119.0 57 98.2
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 2.0e-25 119.0 57 98.2
RcHm_v2.0_Chr7g0230091 Rosa chinensis HOM05D000017 ORTHO05D000013 8.6e-21 103.6 134 42.5
FvH4_3g06732 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-19 99.4 130 44.6
FAN13G0802 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.6e-17 92.0 128 42.2
FAN02G4146 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.7e-16 89.4 123 42.3
FAN12G0699 Fragaria x ananassa HOM05D000017 ORTHO05D000013 7.1e-15 84.0 53 73.6
FAN23G0332 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.9e-12 75.9 104 45.2
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 4.3e-12 74.7 37 94.6
FAN15G1131 Fragaria x ananassa HOM05D000017 ORTHO05D000013 6.8e-10 67.4 89 40.4
MD12G1093400 Malus domestica HOM05D000017 ORTHO05D000013 2.6e-09 65.5 71 45.1
FvH4_5g24391 Fragaria vesca HOM05D000017 ORTHO05D000013 5.8e-09 64.3 64 48.4
FvH4_6g20107 Fragaria vesca HOM05D000017 ORTHO05D000013 5.8e-09 64.3 64 48.4
FvH4_6g34232 Fragaria vesca HOM05D000017 ORTHO05D000013 9.9e-09 63.5 100 39.0
Hma1.2p1_1280F.1_g272510 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-08 63.2 60 46.7
Hma1.2p1_1910F.1_g307260 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-08 63.2 60 46.7
Hma1.2p1_1001F.1_g246490 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-08 62.8 60 46.7
Hma1.2p1_1640F.1_g295030 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-08 62.8 60 46.7
Hma1.2p1_0080F.1_g042040 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-08 62.4 60 46.7
Hma1.2p1_0106F.1_g050890 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-08 62.4 59 50.8
RcHm_v2.0_Chr3g0453251 Rosa chinensis HOM05D000017 ORTHO05D000013 3.8e-08 61.6 68 41.2
Hma1.2p1_0601F.1_g187270 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.9e-08 61.2 59 45.8
FvH4_4g07822 Fragaria vesca HOM05D000017 ORTHO05D000013 6.4e-08 60.8 64 48.4
Hma1.2p1_0439F.1_g153280 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-08 60.8 60 45.0
FvH4_7g07292 Fragaria vesca HOM05D000017 ORTHO05D000013 8.4e-08 60.5 62 48.4
RcHm_v2.0_Chr1g0347471 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-08 60.5 72 40.3
RcHm_v2.0_Chr2g0127961 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-08 60.5 72 40.3
RcHm_v2.0_Chr4g0422481 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-08 60.5 72 40.3
RcHm_v2.0_Chr5g0042901 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-08 60.5 72 40.3
RcHm_v2.0_Chr7g0235291 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-08 60.5 72 40.3
Hma1.2p1_0349F.1_g132090 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-07 60.1 60 46.7
Hma1.2p1_2284F.1_g318880 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-07 60.1 60 46.7
Hma1.2p1_0098F.1_g048460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-07 59.7 59 44.1
FAN21G3438 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.9e-07 59.3 66 43.9
Hma1.2p1_1305F.1_g274570 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-07 58.9 60 45.0
FvH4_5g03092 Fragaria vesca HOM05D000017 ORTHO05D000013 3.2e-07 58.5 64 46.9
FAN27G0047 Fragaria x ananassa HOM05D000017 ORTHO05D000013 3.2e-07 58.5 64 46.9
Hma1.2p1_1314F.1_g275130 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-07 58.2 59 44.1
FAN27G3131 Fragaria x ananassa HOM05D000017 ORTHO05D000013 5.4e-07 57.8 36 69.4
Hma1.2p1_0111F.1_g053550 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-07 57.8 60 45.0
Hma1.2p1_0171F.1_g075720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-07 57.8 60 45.0
Hma1.2p1_0203F.1_g086740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-07 57.8 58 48.3
Hma1.2p1_1112F.1_g258590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-07 57.8 97 34.0
Hma1.2p1_1112F.1_g258595 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-07 57.8 97 34.0
Hma1.2p1_0334F.1_g128600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.1e-07 57.4 60 45.0
CSS0008475 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0009052 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0017742 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0026860 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0028891 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0029230 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0030252 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0030741 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0033184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
CSS0042382 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 46.6
Hma1.2p1_1319F.1_g275290 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.3e-07 57.0 60 45.0
Hma1.2p1_1593F.1_g292540 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.3e-07 57.0 60 45.0
Hma1.2p1_2603F.1_g325240 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.3e-07 57.0 58 43.1
CSS0025760 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.2e-06 56.6 70 37.1
FAN11G1406 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.2e-06 56.6 83 38.6
Hma1.2p1_0682F.1_g202620 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-06 56.2 56 46.4
MD10G1135700 Malus domestica HOM05D000017 ORTHO05D000013 1.6e-06 56.2 70 38.6
FAN20G2637 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.1e-06 55.8 107 32.7
Hma1.2p1_0971F.1_g242740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-06 55.8 60 43.3
FvH4_3g27583 Fragaria vesca HOM05D000017 ORTHO05D000013 2.7e-06 55.5 90 37.8
FvH4_4g09692 Fragaria vesca HOM05D000017 ORTHO05D000013 2.7e-06 55.5 85 37.6
MD15G1409800 Malus domestica HOM05D000017 ORTHO05D000013 2.7e-06 55.5 63 39.7
FvH4_2g18181 Fragaria vesca HOM05D000017 ORTHO05D000013 3.5e-06 55.1 98 33.7
FvH4_3g40971 Fragaria vesca HOM05D000017 ORTHO05D000013 3.5e-06 55.1 84 38.1
FvH4_6g31341 Fragaria vesca HOM05D000017 ORTHO05D000013 3.5e-06 55.1 84 38.1
FvH4_6g37972 Fragaria vesca HOM05D000017 ORTHO05D000013 3.5e-06 55.1 84 38.1
Rhsim01G0036700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.5e-06 55.1 124 29.8
Rhsim05G0055700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.5e-06 55.1 124 29.8
Rhsim05G0171400 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.5e-06 55.1 124 29.8
Rhsim06G0208900 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.5e-06 55.1 124 29.8
Hma1.2p1_0036F.1_g023461 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-06 54.7 55 43.6
Hma1.2p1_0156F.1_g068760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-06 54.7 55 43.6
Hma1.2p1_0036F.1_g022600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.0e-06 54.3 69 42.0
Hma1.2p1_1045F.1_g251500 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.0e-06 54.3 60 43.3
Migut.G00903 Erythranthe guttata HOM05D000017 ORTHO05D000013 7.8e-06 53.9 130 30.0
FAN27G0027 Fragaria x ananassa HOM05D000017 ORTHO05D000013 7.8e-06 53.9 36 69.4
Rhsim01G0083800 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.8e-06 53.9 55 41.8


User provided reference genes

Program Settings