Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.4e-52 207.6 100 100.0
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.3e-47 191.4 91 100.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.9e-42 175.6 91 94.5
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.1e-42 173.7 91 94.5
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.1e-37 159.8 91 86.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 4.4e-36 154.5 94 84.0
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 6.0e-33 144.1 94 81.9
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.0e-32 143.3 91 73.6
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.7e-32 142.5 96 76.0
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 1.1e-31 139.8 98 74.5
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.1e-31 139.8 99 71.7
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 2.5e-31 138.7 95 75.8
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 9.6e-31 136.7 99 70.7
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.3e-30 136.3 97 69.1
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 2.1e-30 135.6 100 68.0
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.8e-30 135.2 100 69.0
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 4.8e-30 134.4 95 71.6
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 6.2e-30 134.0 95 73.7
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 8.1e-30 133.7 95 73.7
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 8.1e-30 133.7 100 68.0
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 8.1e-30 133.7 100 70.0
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 8.1e-30 133.7 92 73.9
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 8.1e-30 133.7 94 74.5
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.1e-29 133.3 92 75.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.1e-29 133.3 99 66.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.1e-29 133.3 100 68.0
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.8e-29 132.5 95 75.8
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.8e-29 132.5 100 67.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.8e-29 132.5 100 67.0
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.0e-29 131.3 95 75.8
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 4.0e-29 131.3 95 75.8
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 4.0e-29 131.3 100 68.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 4.0e-29 131.3 95 69.5
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.3e-29 131.0 101 68.3
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-28 129.8 102 66.7
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-28 129.8 102 66.7
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.2e-28 129.8 95 74.7
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.0e-28 129.0 104 67.3
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.0e-28 129.0 104 67.3
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.0e-28 129.0 104 67.3
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.0e-28 129.0 100 66.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.6e-28 128.6 92 71.7
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 2.6e-28 128.6 97 67.0
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.6e-28 128.6 96 68.8
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.6e-28 128.6 96 67.7
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 2.6e-28 128.6 96 70.8
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 2.6e-28 128.6 101 67.3
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 3.4e-28 128.3 93 73.1
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.4e-28 128.3 102 70.6
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 4.4e-28 127.9 97 69.1
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 5.8e-28 127.5 95 74.7
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 5.8e-28 127.5 97 66.0
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 5.8e-28 127.5 108 64.8
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 7.6e-28 127.1 100 68.0
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 9.9e-28 126.7 100 67.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 9.9e-28 126.7 100 68.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 1.3e-27 126.3 98 68.4
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.3e-27 126.3 92 71.7
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.7e-27 125.9 95 72.6
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.7e-27 125.9 91 69.2
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 2.9e-27 125.2 100 64.0
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 4.9e-27 124.4 97 63.9
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 8.4e-27 123.6 103 64.1
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.1e-26 123.2 104 62.5
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.4e-26 122.9 97 62.9
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 2.4e-26 122.1 99 65.7
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.4e-26 122.1 104 66.3
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.4e-26 122.1 100 66.0
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 4.2e-26 121.3 97 67.0
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 5.4e-26 120.9 91 63.7
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 5.4e-26 120.9 96 69.8
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 7.1e-26 120.6 100 66.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 9.3e-26 120.2 98 60.2
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 1.2e-25 119.8 100 64.0
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.6e-25 119.4 91 61.5
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.6e-25 119.4 91 61.5
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.6e-25 119.4 91 61.5
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.1e-25 119.0 93 66.7
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.1e-25 119.0 93 66.7
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 2.1e-25 119.0 96 64.6
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 2.1e-25 119.0 105 60.0
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 2.1e-25 119.0 101 64.4
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 3.5e-25 118.2 93 64.5
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 3.5e-25 118.2 91 60.4
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 3.5e-25 118.2 93 64.5
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.6e-25 117.9 86 72.1
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 4.6e-25 117.9 96 62.5
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 4.6e-25 117.9 96 61.5
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 4.6e-25 117.9 96 61.5
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 4.6e-25 117.9 96 61.5
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 6.0e-25 117.5 115 56.5
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 6.0e-25 117.5 103 63.1
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 7.8e-25 117.1 98 63.3
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 7.8e-25 117.1 103 65.0
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.0e-24 116.7 101 58.4
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-24 116.3 86 70.9
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 2.3e-24 115.5 96 64.6
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 3.0e-24 115.2 100 63.0
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 3.9e-24 114.8 93 68.8
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 3.9e-24 114.8 92 66.3
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 3.9e-24 114.8 96 61.5
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 5.1e-24 114.4 97 64.9
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 6.6e-24 114.0 96 63.5
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.5e-23 112.1 102 62.7
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 9.6e-23 110.2 99 59.6
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 2.8e-22 108.6 86 69.8
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 4.8e-22 107.8 100 59.0
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 6.2e-22 107.5 79 69.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.4e-21 106.3 70 77.1
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 2.4e-21 105.5 103 58.3
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.1e-21 105.1 64 81.2
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 2.0e-20 102.4 62 79.0
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 4.5e-20 101.3 94 62.8
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 8.4e-19 97.1 92 55.4
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.4e-18 96.3 97 55.7
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.4e-18 96.3 99 54.5
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.8e-16 89.4 92 57.6
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.3e-15 85.1 72 58.3
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 4.8e-14 81.3 71 53.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 8.1e-14 80.5 55 72.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.5e-12 76.3 52 67.3
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.5e-12 76.3 85 47.1
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 2.0e-12 75.9 78 52.6
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 3.8e-11 71.6 52 59.6
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 9.3e-10 67.0 84 50.0
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 1.2e-09 66.6 60 60.0
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 5.1e-08 61.2 29 86.2
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.9e-07 59.3 131 36.6
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.3e-07 58.5 68 48.5


User provided reference genes

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