Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.3e-140 503.1 259 100.0
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-129 466.1 253 94.1
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.7e-127 458.4 247 93.9
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.4e-118 429.9 231 93.9
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.5e-117 425.2 231 95.2
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.7e-100 369.8 235 82.6
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 3.0e-92 342.4 237 75.9
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 1.7e-87 326.6 209 80.4
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 4.6e-85 318.5 230 70.4
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.7e-84 316.6 209 73.7
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 5.1e-84 315.1 227 70.9
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 3.6e-82 308.9 210 73.3
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 8.1e-82 307.8 237 69.2
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.1e-81 307.4 241 66.8
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 6.9e-81 304.7 212 70.8
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 9.0e-81 304.3 233 68.2
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.5e-80 303.5 263 61.6
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 9.9e-80 300.8 220 69.1
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.1e-78 297.4 279 57.3
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.4e-78 297.0 212 69.8
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.4e-78 297.0 231 65.4
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 9.3e-78 294.3 231 64.1
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.7e-77 292.7 212 68.9
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 4.6e-77 292.0 231 64.9
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 4.6e-77 292.0 210 69.5
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 7.9e-77 291.2 217 67.7
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.3e-76 290.4 231 64.1
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 2.3e-76 289.7 240 62.9
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 3.0e-76 289.3 210 68.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 3.0e-76 289.3 210 67.1
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 3.9e-76 288.9 211 65.9
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.1e-76 288.5 209 67.5
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 5.1e-76 288.5 220 66.8
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 5.1e-76 288.5 210 70.0
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 5.1e-76 288.5 231 64.5
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 6.7e-76 288.1 230 63.0
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 1.5e-75 287.0 210 68.1
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.5e-75 287.0 225 67.6
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.9e-75 286.6 209 67.0
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 1.9e-75 286.6 240 62.9
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 4.3e-75 285.4 209 66.0
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.6e-74 283.5 210 67.1
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 2.8e-74 282.7 232 62.5
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 2.8e-74 282.7 209 66.5
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 3.7e-74 282.3 232 62.5
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 3.7e-74 282.3 213 66.2
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 4.8e-74 282.0 211 65.9
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 4.8e-74 282.0 219 63.9
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 6.2e-74 281.6 240 62.1
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 2.4e-73 279.6 209 66.0
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 5.3e-73 278.5 231 61.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 9.0e-73 277.7 231 62.3
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.5e-72 276.9 228 61.4
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.5e-72 276.9 228 61.4
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.5e-72 276.9 220 64.1
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 3.4e-72 275.8 209 62.7
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 4.5e-72 275.4 231 62.3
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.6e-72 274.6 231 61.9
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 9.9e-72 274.2 231 61.9
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 2.9e-71 272.7 231 62.8
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.8e-71 272.3 231 61.9
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 3.8e-71 272.3 231 61.5
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.4e-71 271.2 231 61.0
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.4e-71 271.2 231 61.5
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 2.5e-70 269.6 210 61.0
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 5.5e-70 268.5 232 58.2
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.6e-69 266.9 214 64.5
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 2.7e-69 266.2 217 63.6
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.0e-68 264.2 209 61.7
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.0e-68 264.2 209 60.3
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.3e-68 263.1 218 62.4
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 2.3e-68 263.1 218 61.9
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 2.3e-68 263.1 225 62.2
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 8.7e-68 261.2 267 54.7
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 8.7e-68 261.2 231 58.9
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.5e-67 260.4 209 64.1
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 2.5e-67 259.6 209 63.6
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.5e-67 259.6 242 58.3
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 3.3e-67 259.2 209 63.6
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 3.3e-67 259.2 209 63.6
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 3.3e-67 259.2 209 63.6
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 5.6e-67 258.5 209 61.2
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 5.6e-67 258.5 219 61.6
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 7.4e-67 258.1 224 55.8
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 7.4e-67 258.1 209 60.8
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.3e-66 257.3 231 60.6
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 1.6e-66 256.9 210 64.3
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 2.1e-66 256.5 209 60.3
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 3.7e-66 255.8 209 61.2
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 4.8e-66 255.4 209 59.8
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 3.1e-65 252.7 209 59.3
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 6.9e-65 251.5 220 59.1
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 6.9e-65 251.5 211 59.7
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 1.2e-64 250.8 209 59.3
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.5e-64 248.8 211 59.2
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.0e-63 247.7 204 61.8
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 3.8e-63 245.7 189 61.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.5e-61 239.2 212 54.7
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 9.7e-59 231.1 212 53.8
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 3.7e-58 229.2 211 55.5
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 5.3e-57 225.3 155 70.3
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.3e-55 220.7 147 71.4
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.4e-54 217.2 209 56.0
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.0e-52 211.1 142 74.6
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 2.3e-52 209.9 142 71.8
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 2.5e-51 206.5 139 69.8
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.2e-48 197.6 141 69.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 3.9e-44 182.6 210 44.8
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.7e-42 176.0 208 47.6
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 5.3e-41 172.2 127 65.4
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 3.6e-37 159.5 113 67.3
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 2.9e-31 139.8 191 43.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 4.2e-14 82.8 179 34.6
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.8e-12 77.4 114 39.5
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-06 57.4 56 58.9


User provided reference genes

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