Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0905 Fragaria x ananassa HOM05D001158 ORTHO05D000964 8.9e-68 260.0 119 100.0
FAN18G2374 Fragaria x ananassa HOM05D001158 ORTHO05D000964 2.9e-66 255.0 119 96.6
FvH4_5g01850 Fragaria vesca HOM05D001158 ORTHO05D000964 6.9e-44 180.6 82 98.8
FAN04G1507 Fragaria x ananassa HOM05D001158 ORTHO05D000964 9.0e-44 180.3 82 97.6
RcHm_v2.0_Chr7g0198681 Rosa chinensis HOM05D001158 ORTHO05D000964 5.3e-20 101.3 81 59.3
RcHm_v2.0_Chr7g0198671 Rosa chinensis HOM05D001158 ORTHO05D000964 2.0e-11 72.8 84 45.2
Gohir.D08G198500 Gossypium hirsutum HOM05D001158 ORTHO05D000964 1.4e-09 66.6 92 37.0
Gorai.004G209300 Gossypium raimondii HOM05D001158 ORTHO05D000964 1.4e-09 66.6 92 37.0
Prupe.5G094700 Prunus persica HOM05D001158 ORTHO05D000964 3.2e-09 65.5 83 41.0
MD06G1076700 Malus domestica HOM05D001158 ORTHO05D000964 4.2e-09 65.1 83 41.0
HPP92_020864 Vanilla planifolia HOM05D001158 ORTHO05D000964 5.5e-09 64.7 81 39.5
HPP92_028125 Vanilla planifolia HOM05D001158 ORTHO05D000964 7.2e-09 64.3 81 39.5
Dinv43775 Davidia involucrata HOM05D001158 ORTHO05D000964 1.2e-08 63.5 80 43.8
CSS0037686 Camellia sinensis var. sinensis HOM05D001158 ORTHO05D000964 2.1e-08 62.8 80 42.5
MD01G1049000 Malus domestica HOM05D001158 ORTHO05D000964 3.6e-08 62.0 82 36.6
Prupe.2G158500 Prunus persica HOM05D001158 ORTHO05D000964 4.7e-08 61.6 82 37.8
CAN.G859.6 Capsicum annuum HOM05D001158 ORTHO05D000964 6.1e-08 61.2 82 43.9
Oeu049558.2 Olea europaea HOM05D001158 ORTHO05D000964 7.9e-08 60.8 87 37.9
Actinidia38303 Actinidia chinensis HOM05D001158 ORTHO05D000964 1.4e-07 60.1 86 41.9
RcHm_v2.0_Chr1g0352981 Rosa chinensis HOM05D001158 ORTHO05D000964 1.4e-07 60.1 83 38.6
Oeu056345.1 Olea europaea HOM05D001158 ORTHO05D000964 2.3e-07 59.3 82 40.2
Prupe.2G158700 Prunus persica HOM05D001158 ORTHO05D000964 2.3e-07 59.3 82 36.6
AT1G63220 Arabidopsis thaliana HOM05D001158 ORTHO05D000964 3.0e-07 58.9 82 40.2
Carub.0002s0162 Capsella rubella HOM05D001158 ORTHO05D000964 3.0e-07 58.9 82 40.2
Aqoxy5G03960 Aquilegia oxysepala HOM05D001158 ORTHO05D000964 3.9e-07 58.5 82 40.2
AL2G12160 Arabidopsis lyrata HOM05D001158 ORTHO05D000964 3.9e-07 58.5 82 39.0
Hund27312 Selenicereus undatus HOM05D001158 ORTHO05D000964 3.9e-07 58.5 82 39.0
Sopen10g007070 Solanum pennellii HOM05D001158 ORTHO05D000964 3.9e-07 58.5 81 34.6
Sopen10g007080 Solanum pennellii HOM05D001158 ORTHO05D000964 3.9e-07 58.5 81 32.1
CARHR048260 Cardamine hirsuta HOM05D001158 ORTHO05D000964 5.1e-07 58.2 82 37.8
THA.LOC104809411 Tarenaya hassleriana HOM05D001158 ORTHO05D000964 5.1e-07 58.2 82 39.0
CsaV3_5G003090 Cucumis sativus L. HOM05D001158 ORTHO05D000964 6.7e-07 57.8 82 39.0
Glyma.08G011900 Glycine max HOM05D001158 ORTHO05D000964 6.7e-07 57.8 83 37.3
Peaxi162Scf00233g00911 Petunia axillaris HOM05D001158 ORTHO05D000964 6.7e-07 57.8 83 31.3
Thecc.03G274700 Theobroma cacao HOM05D001158 ORTHO05D000964 6.7e-07 57.8 82 36.6
Actinidia27526 Actinidia chinensis HOM05D001158 ORTHO05D000964 8.8e-07 57.4 80 41.2
ATR0680G051 Amborella trichopoda HOM05D001158 ORTHO05D000964 8.8e-07 57.4 82 35.4
Lalb_Chr16g0389801 Lupinus albus HOM05D001158 ORTHO05D000964 8.8e-07 57.4 83 38.6
MD01G1048900 Malus domestica HOM05D001158 ORTHO05D000964 8.8e-07 57.4 86 32.6
PGR042G3504 Punica granatum HOM05D001158 ORTHO05D000964 8.8e-07 57.4 82 39.0
RcHm_v2.0_Chr7g0198691 Rosa chinensis HOM05D001158 ORTHO05D000964 8.8e-07 57.4 82 37.8
AUR62004307 Chenopodium quinoa HOM05D001158 ORTHO05D000964 1.1e-06 57.0 83 38.6
MELO3C005646.2 Cucumis melo HOM05D001158 ORTHO05D000964 1.1e-06 57.0 82 39.0
AUR62022758 Chenopodium quinoa HOM05D001158 ORTHO05D000964 1.5e-06 56.6 83 38.6
Manes.02G025000 Manihot esculenta HOM05D001158 ORTHO05D000964 1.5e-06 56.6 82 37.8
Os04g0531100 Oryza sativa ssp. japonica HOM05D001158 ORTHO05D000964 1.5e-06 56.6 95 35.8
Peaxi162Scf00102g01417 Petunia axillaris HOM05D001158 ORTHO05D000964 1.5e-06 56.6 82 37.8
Phvul.002G286900 Phaseolus vulgaris HOM05D001158 ORTHO05D000964 1.5e-06 56.6 80 36.2
TAR629G2983 Trochodendron aralioides HOM05D001158 ORTHO05D000964 1.5e-06 56.6 82 35.4
Hma1.2p1_0033F.1_g020460 Hydrangea macrophylla HOM05D001158 ORTHO05D000964 2.0e-06 56.2 82 39.0
Nn1g01415 Nelumbo nucifera HOM05D001158 ORTHO05D000964 2.0e-06 56.2 82 35.4
ATR0680G245 Amborella trichopoda HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 35.4
BcaB07g31392 Brassica carinata HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 36.6
BcaC04g22712 Brassica carinata HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 35.4
BolC9t54517H Brassica oleracea HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 35.4
Eucgr.E00562 Eucalyptus grandis HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 35.4
Prupe.2G158800 Prunus persica HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 34.1
RcHm_v2.0_Chr1g0352971 Rosa chinensis HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 35.4
RcHm_v2.0_Chr1g0353061 Rosa chinensis HOM05D001158 ORTHO05D000964 2.6e-06 55.8 82 34.1
arahy.Tifrunner.gnm1.ann1.2V00G0 Arachis hypogaea HOM05D001158 ORTHO05D000964 3.3e-06 55.5 83 38.6
Ca_12825_v3 Cicer arietinum L. HOM05D001158 ORTHO05D000964 3.3e-06 55.5 82 36.6
SEGI_24227 Sequoiadendron giganteum HOM05D001158 ORTHO05D000964 3.3e-06 55.5 83 36.1
THA.LOC104823579 Tarenaya hassleriana HOM05D001158 ORTHO05D000964 3.3e-06 55.5 82 37.8
unitig_0.g1229 Utricularia gibba HOM05D001158 ORTHO05D000964 3.3e-06 55.5 83 36.1
BcaC04g22477 Brassica carinata HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
A09p15600 Brassica napus HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
C09p18850 Brassica napus HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
BolC9t54787H Brassica oleracea HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
BraA09t37200Z Brassica rapa HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
ECA240G1030 Erigeron canadensis HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 42.7
Migut.E01118 Erythranthe guttata HOM05D001158 ORTHO05D000964 4.4e-06 55.1 80 37.5
FvH4_7g13480 Fragaria vesca HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 34.1
FAN01G0761 Fragaria x ananassa HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 34.1
FAN06G3873 Fragaria x ananassa HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 34.1
FAN06G4028 Fragaria x ananassa HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 34.1
FAN10G2554 Fragaria x ananassa HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 34.1
Glyma.05G204900 Glycine max HOM05D001158 ORTHO05D000964 4.4e-06 55.1 83 36.1
Lalb_Chr19g0127161 Lupinus albus HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 39.0
Hund16949 Selenicereus undatus HOM05D001158 ORTHO05D000964 4.4e-06 55.1 83 37.3
SEGI_00426 Sequoiadendron giganteum HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 36.6
vmacro13322 Vaccinium macrocarpon HOM05D001158 ORTHO05D000964 4.4e-06 55.1 82 39.0
BraA09t37004Z Brassica rapa HOM05D001158 ORTHO05D000964 5.7e-06 54.7 82 35.4
CDE11G0813 Ceratophyllum demersum HOM05D001158 ORTHO05D000964 5.7e-06 54.7 80 36.2
Cc00_g12190 Coffea canephora HOM05D001158 ORTHO05D000964 5.7e-06 54.7 80 37.5
Dinv38982 Davidia involucrata HOM05D000102 ORTHO05D001041 5.7e-06 54.7 82 36.6
Duzib068G0027 Durio zibethinus HOM05D001158 ORTHO05D000964 5.7e-06 54.7 82 34.1
Thhalv10023745m.g Eutrema salsugineum HOM05D001158 ORTHO05D000964 5.7e-06 54.7 82 35.4
MBI17_g21050_MAGBIO Magnolia biondii HOM05D001158 ORTHO05D000964 5.7e-06 54.7 86 36.0
PGSC0003DMG400003045 Solanum tuberosum HOM05D001158 ORTHO05D000964 5.7e-06 54.7 82 40.2
PGSC0003DMG400019943 Solanum tuberosum HOM05D001158 ORTHO05D000964 5.7e-06 54.7 81 37.0
PGSC0003DMG400026887 Solanum tuberosum HOM05D001158 ORTHO05D000964 5.7e-06 54.7 81 30.9
TWI15G0357 Tripterygium wilfordii HOM05D001158 ORTHO05D000964 5.7e-06 54.7 80 35.0
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 5.7e-06 54.7 82 37.8
A09p13530 Brassica napus HOM05D001158 ORTHO05D000964 7.4e-06 54.3 82 35.4
COL.COLO4_34421 Corchorus olitorius HOM05D001158 ORTHO05D000964 7.4e-06 54.3 82 36.6
Lalb_Chr05g0224981 Lupinus albus HOM05D001158 ORTHO05D000964 7.4e-06 54.3 83 39.8
Rhsim07G0019300 Rhododendron simsii HOM05D001158 ORTHO05D000964 7.4e-06 54.3 80 38.8
VMungo0251G1334 Vigna mungo HOM05D001158 ORTHO05D000964 7.4e-06 54.3 80 36.2
Nitab4.5_0003604g0020 Nicotiana tabacum HOM05D001158 ORTHO05D000964 9.7e-06 53.9 68 42.6
Solyc08g080680.4 Solanum lycopersicum HOM05D001158 ORTHO05D000964 9.7e-06 53.9 85 37.6
Sopen08g028990 Solanum pennellii HOM05D001158 ORTHO05D000964 9.7e-06 53.9 85 37.6
GSVIVG01019850001 Vitis vinifera HOM05D001158 ORTHO05D000964 9.7e-06 53.9 80 37.5


User provided reference genes

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