Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.3e-131 473.0 235 100.0
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.1e-122 443.4 235 94.9
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.6e-121 439.5 235 93.6
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.8e-120 434.1 235 93.2
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 6.2e-89 331.3 236 74.2
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.4e-88 329.3 236 73.7
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 7.6e-87 324.3 236 73.3
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.9e-85 319.7 236 72.9
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 4.2e-85 318.5 237 72.2
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.3e-75 286.2 235 65.5
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 5.1e-75 285.0 235 65.1
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 3.8e-70 268.9 232 64.2
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 6.5e-54 214.9 237 55.3
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 3.7e-41 172.6 237 47.7
FvH4_2g09870 Fragaria vesca HOM05D006494 ORTHO05D007787 7.7e-39 164.9 182 54.9
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 4.0e-35 152.5 244 45.1
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.3e-33 147.5 244 44.3
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.8e-32 143.7 242 44.6
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 1.6e-31 140.6 156 51.9
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.2e-26 124.4 247 38.5
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.7e-25 119.4 265 37.4
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.8e-24 117.1 261 37.2
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 3.5e-23 112.8 259 35.5
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 3.3e-21 106.3 262 34.4
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.6e-20 104.0 253 34.4
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.8e-20 103.2 258 33.7
FAN24G2166 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.0e-20 101.7 65 78.5
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.0e-19 101.3 262 34.4
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 3.0e-19 99.8 212 35.4
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 6.8e-19 98.6 273 34.8
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.5e-18 97.4 257 33.1
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.5e-18 97.4 251 34.3
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.0e-18 97.1 256 33.6
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.0e-18 97.1 161 41.0
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.6e-18 96.7 233 33.9
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.7e-17 94.0 161 40.4
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.2e-17 93.6 261 33.3
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.4e-16 90.9 259 32.8
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 2.4e-16 90.1 268 31.3
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.2e-16 89.7 260 33.5
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 4.1e-16 89.4 270 30.4
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.2e-16 88.2 260 33.1
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 9.2e-16 88.2 207 34.8
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 4.6e-15 85.9 268 32.8
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 1.7e-14 84.0 239 33.1
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 8.6e-14 81.6 150 38.0
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.1e-13 81.3 166 36.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.1e-13 81.3 235 32.3
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.5e-13 80.9 243 30.9
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.5e-13 80.9 243 30.9
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.5e-13 80.9 158 37.3
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.9e-13 80.5 256 32.0
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 2.5e-13 80.1 178 34.3
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 3.3e-13 79.7 178 34.3
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 4.3e-13 79.3 238 32.8
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 5.6e-13 79.0 258 29.5
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 5.6e-13 79.0 262 32.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.3e-13 78.6 256 28.5
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 9.5e-13 78.2 267 31.5
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.6e-12 77.4 269 32.7
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 2.1e-12 77.0 231 32.5
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 4.7e-12 75.9 255 33.3
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 4.7e-12 75.9 242 31.4
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 6.2e-12 75.5 258 33.7
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 8.0e-12 75.1 265 31.7
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.4e-11 74.3 268 29.9
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 4.0e-11 72.8 255 32.2
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.0e-11 72.8 264 29.9
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 8.9e-11 71.6 240 31.7
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.0e-10 70.5 257 28.8
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.0e-10 70.5 164 31.7
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 2.0e-10 70.5 265 29.4
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 2.6e-10 70.1 266 32.3
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 3.4e-10 69.7 252 30.2
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.4e-10 69.3 196 30.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 4.4e-10 69.3 246 29.3
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 5.8e-10 68.9 260 30.4
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 5.8e-10 68.9 259 27.0
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 9.8e-10 68.2 246 30.5
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 9.8e-10 68.2 278 30.9
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 1.7e-09 67.4 267 28.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.9e-09 66.6 163 35.0
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 6.4e-09 65.5 246 30.1
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 6.4e-09 65.5 273 30.8
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 8.3e-09 65.1 217 32.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.9e-08 63.9 200 28.5
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.9e-08 63.9 257 28.8
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 3.2e-08 63.2 217 31.8
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.2e-08 63.2 156 31.4
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 1.2e-07 61.2 244 27.0
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.6e-07 60.8 257 30.0
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 2.7e-07 60.1 166 28.9
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 2.7e-07 60.1 250 28.0
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 4.6e-07 59.3 258 29.1
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.6e-07 59.3 105 38.1
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 6.6e-06 55.5 241 27.4


User provided reference genes

Program Settings