Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 8.1e-129 463.8 237 100.0
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.9e-126 455.3 237 97.9
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.3e-125 450.3 237 96.6
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.2e-124 449.9 237 96.6
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 4.6e-124 448.0 237 95.8
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 1.2e-100 370.2 234 80.3
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 3.7e-97 358.6 234 76.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 6.5e-94 347.8 237 73.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 2.5e-93 345.9 236 75.0
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 4.2e-93 345.1 234 73.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 5.5e-93 344.7 234 73.5
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 2.7e-92 342.4 234 72.2
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 3.6e-92 342.0 234 72.6
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 4.6e-92 341.7 234 71.4
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 6.1e-92 341.3 234 73.1
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 7.9e-92 340.9 237 71.7
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.0e-91 340.5 237 69.6
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.4e-91 340.1 234 71.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 2.3e-91 339.3 226 70.4
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 3.0e-91 339.0 232 71.1
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 6.7e-91 337.8 232 69.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.0e-90 336.3 234 69.2
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.0e-90 336.3 234 70.1
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 2.0e-90 336.3 254 68.1
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.5e-90 335.9 234 70.5
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 7.4e-90 334.3 233 69.5
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.3e-89 333.6 234 70.1
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.3e-89 333.6 234 70.5
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 2.2e-89 332.8 234 70.9
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.7e-89 332.0 234 71.4
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.1e-88 330.5 234 65.8
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.1e-88 328.6 234 70.9
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 6.9e-88 327.8 236 67.8
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 6.9e-88 327.8 237 69.6
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 9.1e-88 327.4 213 75.1
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 1.2e-87 327.0 230 68.3
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 2.6e-87 325.9 234 65.0
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.0e-86 323.9 224 72.3
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.1e-85 320.5 235 68.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.4e-85 320.1 234 68.8
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 2.5e-85 319.3 223 70.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 3.2e-85 318.9 222 71.2
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 7.2e-85 317.8 217 72.8
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 7.2e-85 317.8 235 65.1
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.6e-84 316.6 234 65.8
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 2.1e-84 316.2 236 65.3
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 4.7e-84 315.1 234 67.1
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 6.1e-84 314.7 236 67.8
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 7.9e-84 314.3 235 68.1
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 2.3e-83 312.8 234 67.5
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.0e-83 312.4 234 65.4
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 3.0e-83 312.4 229 68.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.1e-82 310.5 233 73.0
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.5e-82 310.1 224 67.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.5e-82 310.1 235 65.5
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 9.7e-82 307.4 226 65.9
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 2.8e-81 305.8 240 63.3
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 3.7e-81 305.4 236 64.8
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 4.8e-81 305.1 230 63.5
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 4.8e-81 305.1 232 64.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.8e-80 303.1 238 64.3
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 1.2e-79 300.4 225 64.0
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 4.5e-79 298.5 238 63.4
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 7.7e-79 297.7 234 60.7
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 1.7e-78 296.6 234 62.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 2.2e-78 296.2 233 63.5
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 3.8e-78 295.4 240 60.8
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 5.0e-78 295.0 228 62.7
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 6.5e-78 294.7 229 62.4
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 6.5e-78 294.7 226 61.9
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.1e-77 293.9 231 61.9
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.9e-77 293.1 234 61.1
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.9e-77 293.1 235 60.9
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 7.2e-77 291.2 234 60.7
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 7.2e-77 291.2 234 60.7
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 9.4e-77 290.8 235 61.3
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 1.2e-76 290.4 234 59.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 2.7e-76 289.3 234 59.8
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 2.7e-76 289.3 235 59.6
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 3.6e-76 288.9 232 61.2
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 6.1e-76 288.1 234 59.4
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 6.1e-76 288.1 226 63.3
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 8.0e-76 287.7 238 60.9
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.4e-75 287.0 234 60.3
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.8e-75 286.6 229 59.8
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 3.9e-75 285.4 229 64.2
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 5.2e-75 285.0 234 62.0
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 8.8e-75 284.3 228 59.6
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 2.0e-74 283.1 227 64.3
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 4.4e-74 282.0 214 64.0
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 7.0e-72 274.6 208 63.0
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.6e-71 272.7 222 59.9
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 4.5e-71 271.9 218 61.5
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 3.4e-66 255.8 262 52.3
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.7e-63 246.1 224 55.4
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.4e-59 233.8 232 52.6
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 8.3e-57 224.6 152 72.4
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.1e-56 224.2 156 71.2
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.6e-44 183.7 97 93.8
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.1e-44 183.3 211 43.1
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.2e-42 177.6 225 41.8
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 9.8e-42 174.5 139 59.0
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.9e-41 172.9 156 58.3
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 6.4e-41 171.8 150 56.0
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.1e-40 171.0 229 41.0
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 5.0e-38 162.2 234 42.7
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 2.2e-33 146.7 227 34.8
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 3.7e-33 146.0 230 34.3
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 9.2e-32 141.4 226 33.2
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 7.8e-31 138.3 119 55.5
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 2.5e-29 133.3 114 60.5
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 1.6e-28 130.6 163 43.6
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 9.6e-21 104.8 215 32.1
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 9.6e-21 104.8 72 63.9
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 1.5e-10 70.9 89 44.9
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 1.5e-10 70.9 89 44.9
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 1.1e-08 64.7 41 70.7
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 6.6e-06 55.5 43 58.1


User provided reference genes

Program Settings