Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0732 Fragaria x ananassa HOM05D066921 ORTHO05D000039 2.0e-52 208.8 100 100.0
FAN04G2687 Fragaria x ananassa HOM05D066921 ORTHO05D000039 9.9e-36 153.3 79 92.4
FvH4_5g15980 Fragaria vesca HOM05D000052 ORTHO05D005847 3.3e-23 111.7 84 66.7
FvH4_5g15943 Fragaria vesca HOM05D000007 ORTHO05D000039 7.3e-23 110.5 142 50.0
FAN18G3857 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.3e-23 110.5 142 50.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.8e-21 105.9 98 57.1
Prupe.4G210300 Prunus persica HOM05D000007 ORTHO05D000039 2.2e-11 72.4 130 37.7
RcHm_v2.0_Chr3g0482251 Rosa chinensis HOM05D000007 ORTHO05D000039 2.2e-11 72.4 128 38.3
MD16G1129700 Malus domestica HOM05D000007 ORTHO05D000039 3.8e-11 71.6 133 37.6
RcHm_v2.0_Chr3g0482231 Rosa chinensis HOM05D000007 ORTHO05D000039 3.2e-10 68.6 129 38.0
FAN10G0938 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.1e-10 67.4 134 35.8
RcHm_v2.0_Chr1g0350191 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-09 66.6 134 36.6
FAN09G1929 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.5e-09 65.1 130 36.9
FAN06G1206 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.6e-09 64.7 132 36.4
FAN10G1832 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.6e-09 64.7 132 36.4
FAN10G3302 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.6e-09 64.7 132 36.4
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 6.0e-09 64.3 127 34.6
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.9e-09 63.9 127 34.6
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.9e-09 63.9 127 34.6
Prupe.4G156000 Prunus persica HOM05D000007 ORTHO05D000039 3.9e-08 61.6 106 41.5
FvH4_7g11650 Fragaria vesca HOM05D000007 ORTHO05D020693 6.7e-08 60.8 131 35.1
Prupe.1G172200 Prunus persica HOM05D000007 ORTHO05D000039 1.1e-07 60.1 132 34.8
FAN03G1966 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.5e-07 59.7 130 33.8
FAN10G3851 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 59.7 87 40.2
QL08p020259 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-07 59.7 104 34.6
FvH4_1g08281 Fragaria vesca HOM05D000007 ORTHO05D000039 2.5e-07 58.9 131 32.8
FAN06G0669 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.5e-07 58.9 131 32.1
FAN06G4010 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.5e-07 58.9 131 32.1
FAN23G1504 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.5e-07 58.9 131 32.8
Prupe.1G172300 Prunus persica HOM05D000007 ORTHO05D000039 2.5e-07 58.9 134 35.8
RcHm_v2.0_Chr2g0116421 Rosa chinensis HOM05D000007 ORTHO05D000039 2.5e-07 58.9 124 32.3
RcHm_v2.0_Chr2g0116451 Rosa chinensis HOM05D000007 ORTHO05D000039 2.5e-07 58.9 124 32.3
FAN03G2844 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-07 58.5 135 31.9
FAN06G2092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-07 58.5 116 40.5
FAN16G1021 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-07 58.5 105 38.1
Prupe.8G211600 Prunus persica HOM05D000007 ORTHO05D000039 3.3e-07 58.5 86 37.2
FAN01G3153 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.4e-07 57.4 96 40.6
FAN01G1772 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.6e-07 57.0 134 32.8
FAN13G1585 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.6e-07 57.0 80 41.2
FAN21G2720 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.6e-07 57.0 78 41.0
Dinv44148 Davidia involucrata HOM05D000007 ORTHO05D018881 1.3e-06 56.6 87 39.1
FAN28G0121 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.3e-06 56.6 118 33.1
RcHm_v2.0_Chr5g0030021 Rosa chinensis HOM05D000007 ORTHO05D000039 1.3e-06 56.6 124 34.7
FvH4_3g16521 Fragaria vesca HOM05D000007 ORTHO05D000039 2.8e-06 55.5 79 38.0
RcHm_v2.0_Chr5g0067481 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-06 55.5 110 38.2
FvH4_1g26450 Fragaria vesca HOM05D000007 ORTHO05D000039 3.7e-06 55.1 130 30.8
FAN19G1125 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.7e-06 55.1 130 30.8
Cc05_g06390 Coffea canephora HOM05D000007 ORTHO05D000039 6.2e-06 54.3 97 37.1
FAN25G1037 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.2e-06 54.3 78 39.7
FvH4_7g11690 Fragaria vesca HOM05D000007 ORTHO05D000039 8.2e-06 53.9 133 32.3
FAN05G4350 Fragaria x ananassa HOM05D000055 ORTHO05D000039 8.2e-06 53.9 80 36.2
Gorai.013G166900 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.2e-06 53.9 78 34.6
Peaxi162Scf00608g00048 Petunia axillaris HOM05D000007 ORTHO05D000039 8.2e-06 53.9 78 39.7
Peaxi162Scf00608g00323 Petunia axillaris HOM05D000007 ORTHO05D000039 8.2e-06 53.9 58 46.6
RcHm_v2.0_Chr6g0284651 Rosa chinensis HOM05D000007 ORTHO05D000039 8.2e-06 53.9 121 33.1


User provided reference genes

Program Settings