Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 2.7e-74 282.0 144 100.0
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 6.6e-33 144.4 148 62.8
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 4.7e-31 138.3 148 61.5
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 6.8e-30 134.4 148 60.1
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 4.4e-29 131.7 148 59.5
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 9.9e-13 77.4 143 41.3
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.7e-12 76.6 144 43.8
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.2e-12 76.3 165 38.8
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 1.4e-11 73.6 136 43.4
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-11 73.6 127 42.5
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-11 73.6 127 42.5
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-11 73.6 116 44.8
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.4e-11 72.8 146 40.4
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 5.4e-11 71.6 130 43.8
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 7.1e-11 71.2 139 39.6
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 9.3e-11 70.9 128 45.3
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 9.3e-11 70.9 132 39.4
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 9.3e-11 70.9 116 44.0
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 3.5e-10 68.9 143 40.6
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 6.0e-10 68.2 143 39.9
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 1.0e-09 67.4 134 41.8
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 1.3e-09 67.0 120 42.5
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 1.3e-09 67.0 120 42.5
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.3e-09 67.0 137 38.7
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 1.3e-09 67.0 115 42.6
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.3e-09 67.0 119 41.2
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 2.3e-09 66.2 123 41.5
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.3e-09 66.2 138 37.7
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 2.3e-09 66.2 137 38.0
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 3.9e-09 65.5 121 41.3
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 5.1e-09 65.1 138 39.1
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 5.1e-09 65.1 141 40.4
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 6.7e-09 64.7 145 39.3
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 6.7e-09 64.7 137 40.1
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 6.7e-09 64.7 143 39.2
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.5e-08 63.5 145 37.2
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 1.9e-08 63.2 104 43.3
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 9.6e-08 60.8 117 43.6
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 9.6e-08 60.8 145 38.6
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 9.6e-08 60.8 121 40.5
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 9.6e-08 60.8 132 37.9
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.6e-07 60.1 137 39.4
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.6e-07 60.1 138 37.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 2.1e-07 59.7 146 36.3
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 2.1e-07 59.7 146 36.3
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 2.1e-07 59.7 113 39.8
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 3.7e-07 58.9 104 41.3
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 4.8e-07 58.5 115 40.9
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 4.8e-07 58.5 104 42.3
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 8.1e-07 57.8 139 35.3
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 1.1e-06 57.4 143 34.3
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.8e-06 56.6 118 37.3
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 1.8e-06 56.6 124 38.7
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 2.4e-06 56.2 118 36.4
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 4.0e-06 55.5 101 41.6
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 5.3e-06 55.1 145 35.2
Prupe.5G039300 Prunus persica HOM05D007324 ORTHO05D007884 9.0e-06 54.3 136 36.0


User provided reference genes

Program Settings