Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 4.6e-84 314.7 181 100.0
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 4.6e-84 314.7 181 100.0
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 3.0e-83 312.0 181 98.9
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.7e-81 306.2 181 97.8
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 4.8e-81 304.7 181 96.7
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 2.0e-58 229.6 182 74.2
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 3.4e-26 122.5 184 54.9
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 8.1e-12 74.7 168 45.2
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 8.1e-12 74.7 169 43.2
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.1e-11 74.3 164 45.7
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.4e-11 73.9 172 42.4
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 2.4e-11 73.2 174 44.3
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 2.4e-11 73.2 172 46.5
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.1e-11 72.8 172 42.4
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 3.1e-11 72.8 162 39.5
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 6.8e-11 71.6 157 41.4
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 6.8e-11 71.6 166 45.2
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 8.9e-11 71.2 169 39.1
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 8.9e-11 71.2 163 42.3
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 1.2e-10 70.9 164 46.3
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.2e-10 70.9 167 48.5
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 2.0e-10 70.1 174 48.3
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 4.4e-10 68.9 171 45.0
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.3e-09 67.4 183 45.4
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 1.3e-09 67.4 165 41.2
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.7e-09 67.0 156 42.3
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.7e-09 67.0 157 38.2
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 3.8e-09 65.9 164 40.2
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 6.4e-09 65.1 175 41.1
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 6.4e-09 65.1 156 42.9
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 8.4e-09 64.7 172 44.2
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 1.1e-08 64.3 170 45.3
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 1.9e-08 63.5 158 42.4
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 2.4e-08 63.2 169 36.7
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 3.2e-08 62.8 141 32.6
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 4.2e-08 62.4 182 44.5
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 4.2e-08 62.4 35 77.1
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 5.4e-08 62.0 156 34.6
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 1.6e-07 60.5 164 36.6
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 2.1e-07 60.1 40 65.0
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 2.1e-07 60.1 174 33.3
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 2.7e-07 59.7 43 65.1
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 2.7e-07 59.7 42 59.5
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.7e-07 59.7 155 34.2
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 3.5e-07 59.3 49 59.2
PSO700G0164 Papaver somniferum HOM05D055938 ORTHO05D050202 3.5e-07 59.3 172 32.6
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 6.0e-07 58.5 163 31.3
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 7.8e-07 58.2 151 31.8
PSO447G0267 Papaver somniferum HOM05D055938 ORTHO05D050202 7.8e-07 58.2 172 36.0
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.0e-06 57.8 172 42.4
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.0e-06 57.8 172 42.4
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 1.0e-06 57.8 173 41.0
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 1.0e-06 57.8 45 57.8
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 1.0e-06 57.8 161 41.0
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 1.3e-06 57.4 164 32.3
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 1.3e-06 57.4 41 58.5
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 1.3e-06 57.4 42 57.1
Thhalv10009293m.g Eutrema salsugineum HOM05D009138 ORTHO05D011294 2.3e-06 56.6 41 58.5
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 2.3e-06 56.6 149 33.6
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 3.0e-06 56.2 37 62.2
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 3.0e-06 56.2 195 35.9
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.0e-06 56.2 160 31.2
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 3.9e-06 55.8 164 41.5
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 5.1e-06 55.5 160 41.2
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 5.1e-06 55.5 173 39.3
HPP92_027240 Vanilla planifolia HOM05D042051 ORTHO05D037828 5.1e-06 55.5 169 30.2
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 6.6e-06 55.1 160 33.8
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 6.6e-06 55.1 55 54.5
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 6.6e-06 55.1 153 32.7
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 6.6e-06 55.1 61 47.5
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 6.6e-06 55.1 156 30.1
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 8.7e-06 54.7 55 54.5
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 8.7e-06 54.7 55 54.5
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 8.7e-06 54.7 149 31.5


User provided reference genes

Program Settings