Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0176 Fragaria x ananassa HOM05D002488 ORTHO05D002613 1.3e-38 162.5 82 100.0
FAN09G4273 Fragaria x ananassa HOM05D002488 ORTHO05D002613 7.1e-32 140.2 82 87.8
FAN27G2309 Fragaria x ananassa HOM05D002488 ORTHO05D002613 3.9e-30 134.4 81 85.2
FAN19G3027 Fragaria x ananassa HOM05D002488 ORTHO05D002613 4.5e-26 120.9 81 77.8
FvH4_2g00400 Fragaria vesca HOM05D002488 ORTHO05D002613 2.2e-25 118.6 81 77.8
FAN24G3477 Fragaria x ananassa HOM05D002488 ORTHO05D002613 2.2e-25 118.6 81 77.8
FAN20G0001 Fragaria x ananassa HOM05D002488 ORTHO05D002613 3.8e-25 117.9 82 79.3
FAN23G0169 Fragaria x ananassa HOM05D002488 ORTHO05D002613 5.4e-24 114.0 67 85.1
RcHm_v2.0_Chr6g0249641 Rosa chinensis HOM05D002488 ORTHO05D002613 5.6e-21 104.0 82 68.3
Prupe.8G003900 Prunus persica HOM05D002488 ORTHO05D002613 2.8e-12 75.1 88 51.1
FvH4_5g35210 Fragaria vesca HOM05D002488 ORTHO05D002613 9.0e-11 70.1 83 53.0
FAN08G2097 Fragaria x ananassa HOM05D002488 ORTHO05D002613 9.0e-11 70.1 83 53.0
FAN13G0218 Fragaria x ananassa HOM05D002488 ORTHO05D002613 9.0e-11 70.1 83 53.0
FAN18G1955 Fragaria x ananassa HOM05D002488 ORTHO05D002613 9.0e-11 70.1 83 53.0
MD10G1041600 Malus domestica HOM05D002488 ORTHO05D002613 3.4e-10 68.2 83 49.4
Lj1g0012260 Lotus japonicus HOM05D002488 ORTHO05D002613 1.0e-09 66.6 81 49.4
Sed0014577 Sechium edule HOM05D002488 ORTHO05D002613 1.0e-09 66.6 81 45.7
FAN04G2264 Fragaria x ananassa HOM05D002596 ORTHO05D002851 2.2e-09 65.5 39 76.9
CAN.G338.29 Capsicum annuum HOM05D002488 ORTHO05D002613 5.0e-09 64.3 81 42.0
MELO3C026254.2 Cucumis melo HOM05D002488 ORTHO05D002613 6.5e-09 63.9 83 47.0
CsaV3_1G001020 Cucumis sativus L. HOM05D002488 ORTHO05D002613 6.5e-09 63.9 82 46.3
Lalb_Chr13g0297591 Lupinus albus HOM05D002488 ORTHO05D002613 8.4e-09 63.5 81 43.2
Ca_16132_v3 Cicer arietinum L. HOM05D002488 ORTHO05D002613 1.1e-08 63.2 80 45.0
Lalb_Chr23g0273331 Lupinus albus HOM05D002488 ORTHO05D002613 1.1e-08 63.2 84 46.4
Manes.06G109900 Manihot esculenta HOM05D002488 ORTHO05D002613 1.1e-08 63.2 81 43.2
Lj5C129G10 Lonicera japonica HOM05D002488 ORTHO05D002613 1.4e-08 62.8 82 46.3
Nitab4.5_0003703g0050 Nicotiana tabacum HOM05D002488 ORTHO05D002613 2.5e-08 62.0 81 45.7
Glyma.05G041400 Glycine max HOM05D002488 ORTHO05D002613 4.2e-08 61.2 81 43.2
Nitab4.5_0001793g0070 Nicotiana tabacum HOM05D002488 ORTHO05D002613 7.1e-08 60.5 81 43.2
Ca_14275_v3 Cicer arietinum L. HOM05D002488 ORTHO05D002613 9.3e-08 60.1 81 40.7
Psat4g060240 Pisum sativum HOM05D002488 ORTHO05D002613 9.3e-08 60.1 86 43.0
Manes.14G060900 Manihot esculenta HOM05D002488 ORTHO05D002613 1.2e-07 59.7 83 42.2
MD05G1037800 Malus domestica HOM05D002488 ORTHO05D002613 1.6e-07 59.3 81 44.4
Sc04g0001530 Simmondsia chinensis HOM05D002488 ORTHO05D002613 2.1e-07 58.9 87 42.5
PGSC0003DMG400018117 Solanum tuberosum HOM05D002488 ORTHO05D002613 2.7e-07 58.5 81 40.7
Cpa.g.sc159.31 Carica papaya HOM05D002488 ORTHO05D002613 3.5e-07 58.2 82 43.9
Sed0021301 Sechium edule HOM05D002488 ORTHO05D002613 3.5e-07 58.2 85 40.0
AUR62028730 Chenopodium quinoa HOM05D002488 ORTHO05D002613 4.6e-07 57.8 81 39.5
Nitab4.5_0000025g0310 Nicotiana tabacum HOM05D002488 ORTHO05D002613 4.6e-07 57.8 82 42.7
CANSAT80G1691 Cannabis sativa HOM05D002488 ORTHO05D002613 6.1e-07 57.4 90 43.3
Solyc03g112270.3 Solanum lycopersicum HOM05D002488 ORTHO05D002613 6.1e-07 57.4 81 39.5
Cc04_g11610 Coffea canephora HOM05D002488 ORTHO05D002613 7.9e-07 57.0 81 38.3
HanXRQChr05g0154171 Helianthus annuus HOM05D002488 ORTHO05D002613 7.9e-07 57.0 81 39.5
Nn2g14939 Nelumbo nucifera HOM05D002488 ORTHO05D002613 7.9e-07 57.0 88 44.3
Sopen03g031370 Solanum pennellii HOM05D002488 ORTHO05D002613 7.9e-07 57.0 81 39.5
Actinidia08959 Actinidia chinensis HOM05D002488 ORTHO05D002613 1.0e-06 56.6 81 40.7
Ah.02g110840 Amaranthus hybridus HOM05D002488 ORTHO05D002613 1.0e-06 56.6 85 40.0
ClCG06G017390 Citrullus lanatus HOM05D002488 ORTHO05D002613 1.0e-06 56.6 82 42.7
Peaxi162Scf00801g00213 Petunia axillaris HOM05D002488 ORTHO05D002613 1.0e-06 56.6 82 42.7
TPR.G21814 Trifolium pratense HOM05D002488 ORTHO05D002613 1.0e-06 56.6 83 43.4
EL10Ac5g10659 Beta vulgaris HOM05D002488 ORTHO05D002613 1.3e-06 56.2 88 37.5
TPR.G37454 Trifolium pratense HOM05D002488 ORTHO05D002613 1.3e-06 56.2 81 43.2
vmacro16644 Vaccinium macrocarpon HOM05D002488 ORTHO05D002613 1.3e-06 56.2 81 42.0
Lsat_1_v5_gn_1_27821 Lactuca sativa HOM05D002488 ORTHO05D002613 1.8e-06 55.8 81 42.0
Lj9A442T65 Lonicera japonica HOM05D002488 ORTHO05D002613 1.8e-06 55.8 83 41.0
arahy.Tifrunner.gnm1.ann1.A1CNSV Arachis hypogaea HOM05D002488 ORTHO05D002613 2.3e-06 55.5 85 37.6
Dinv01306 Davidia involucrata HOM05D002488 ORTHO05D002613 2.3e-06 55.5 82 43.9
Dinv20601 Davidia involucrata HOM05D002488 ORTHO05D002613 2.3e-06 55.5 81 45.7
Nn4g22610 Nelumbo nucifera HOM05D002488 ORTHO05D002613 2.3e-06 55.5 89 44.9
Dinv38530 Davidia involucrata HOM05D002488 ORTHO05D002613 3.0e-06 55.1 82 43.9
Nitab4.5_0001566g0020 Nicotiana tabacum HOM05D002488 ORTHO05D002613 3.0e-06 55.1 82 43.9
SGA_v2.0_scaffold25G10801 Striga asiatica HOM05D002488 ORTHO05D002613 3.0e-06 55.1 80 40.0
TWI23G0090 Tripterygium wilfordii HOM05D002488 ORTHO05D002613 3.0e-06 55.1 81 35.8
CiPaw.11G020700 Carya illinoinensis HOM05D002488 ORTHO05D002613 3.9e-06 54.7 86 41.9
Medtr4g105010 Medicago truncatula HOM05D002488 ORTHO05D002613 5.1e-06 54.3 79 38.0
PSO339G4325 Papaver somniferum HOM05D002488 ORTHO05D002613 5.1e-06 54.3 96 35.4
MSTRG.11493 Avicennia marina HOM05D002488 ORTHO05D002613 6.7e-06 53.9 81 37.0
CSS0004341 Camellia sinensis var. sinensis HOM05D002488 ORTHO05D002613 6.7e-06 53.9 87 37.9
CiPaw.12G030700 Carya illinoinensis HOM05D002488 ORTHO05D002613 6.7e-06 53.9 87 44.8
Phvul.009G174300 Phaseolus vulgaris HOM05D002488 ORTHO05D002613 6.7e-06 53.9 81 42.0
SalBow5G3101 Salvia bowleyana HOM05D002488 ORTHO05D002613 6.7e-06 53.9 81 38.3
SalBow5G4499 Salvia bowleyana HOM05D002488 ORTHO05D002613 6.7e-06 53.9 81 38.3
SHI17281 Sapria himalayana HOM05D002488 ORTHO05D002613 6.7e-06 53.9 81 40.7
A05p38020 Brassica napus HOM05D002488 ORTHO05D002613 8.7e-06 53.5 80 36.2
BraA05t22593Z Brassica rapa HOM05D002488 ORTHO05D002613 8.7e-06 53.5 80 36.2
SGA_v2.0_scaffold90G27842 Striga asiatica HOM05D002488 ORTHO05D002613 8.7e-06 53.5 82 40.2


User provided reference genes

Program Settings