Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0030 Fragaria x ananassa HOM05D001419 ORTHO05D016050 1.5e-78 296.2 154 100.0
FAN13G1977 Fragaria x ananassa HOM05D001419 ORTHO05D001376 6.4e-34 147.9 146 65.1
FAN08G1260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.9e-33 146.4 164 59.1
FAN18G1957 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.9e-33 146.4 163 62.6
FvH4_5g09200 Fragaria vesca HOM05D001419 ORTHO05D001376 7.1e-33 144.4 165 60.0
FvH4_1g14570 Fragaria vesca HOM05D001419 ORTHO05D016050 1.2e-32 143.7 99 80.8
FAN04G1873 Fragaria x ananassa HOM05D001419 ORTHO05D001376 7.8e-32 141.0 165 58.8
RcHm_v2.0_Chr7g0188961 Rosa chinensis HOM05D001419 ORTHO05D001376 8.1e-29 131.0 164 53.7
FAN21G0860 Fragaria x ananassa HOM05D001419 ORTHO05D016050 6.0e-24 114.8 100 68.0
MD06G1132600 Malus domestica HOM05D001419 ORTHO05D001376 2.8e-21 105.9 152 48.7
Prupe.5G143600 Prunus persica HOM05D001419 ORTHO05D001376 4.8e-21 105.1 167 44.9
FvH4_3g24840 Fragaria vesca HOM05D001419 ORTHO05D016050 4.0e-20 102.1 120 52.5
FAN23G0283 Fragaria x ananassa HOM05D001419 ORTHO05D016050 4.4e-19 98.6 76 71.1
Phvul.009G164500 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 2.2e-18 96.3 176 43.2
MD14G1149000 Malus domestica HOM05D001419 ORTHO05D001376 1.4e-17 93.6 168 40.5
FAN25G2096 Fragaria x ananassa HOM05D001419 ORTHO05D016050 2.7e-16 89.4 78 66.7
FAN03G2029 Fragaria x ananassa HOM05D001419 ORTHO05D016050 4.6e-16 88.6 62 75.8
FAN11G0108 Fragaria x ananassa HOM05D001419 ORTHO05D016050 7.9e-16 87.8 59 78.0
TWI39G0619 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 7.9e-16 87.8 172 41.9
Lalb_Chr08g0237471 Lupinus albus HOM05D001419 ORTHO05D001376 3.0e-15 85.9 171 38.6
Thecc.03G138300 Theobroma cacao HOM05D001419 ORTHO05D001376 6.6e-15 84.7 153 44.4
Gohir.D11G041500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 5.6e-14 81.6 160 43.1
TAR629G0843 Trochodendron aralioides HOM05D001419 ORTHO05D001376 5.6e-14 81.6 148 44.6
COL.COLO4_16706 Corchorus olitorius HOM05D001419 ORTHO05D001376 7.3e-14 81.3 153 43.1
Duzib205G1629 Durio zibethinus HOM05D001419 ORTHO05D001376 7.3e-14 81.3 162 43.8
Gorai.007G044600 Gossypium raimondii HOM05D001419 ORTHO05D001376 7.3e-14 81.3 160 43.1
TWI23G1068 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 7.3e-14 81.3 153 43.8
Ca_16082_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 9.6e-14 80.9 168 41.1
Dinv23208 Davidia involucrata HOM05D001419 ORTHO05D001376 9.6e-14 80.9 149 43.0
Potri.012G105400 Populus trichocarpa HOM05D001419 ORTHO05D001376 9.6e-14 80.9 161 41.6
Actinidia18315 Actinidia chinensis HOM05D001419 ORTHO05D001376 2.8e-13 79.3 147 43.5
CARHR157670 Cardamine hirsuta HOM05D001419 ORTHO05D001376 3.6e-13 79.0 158 40.5
arahy.Tifrunner.gnm1.ann1.GTVX5U Arachis hypogaea HOM05D001419 ORTHO05D001376 4.8e-13 78.6 181 39.2
Carub.0005s1503 Capsella rubella HOM05D001419 ORTHO05D001376 6.2e-13 78.2 158 41.1
Lsat_1_v5_gn_1_32281 Lactuca sativa HOM05D001419 ORTHO05D001376 6.2e-13 78.2 154 41.6
Manes.06G125500 Manihot esculenta HOM05D001419 ORTHO05D001376 6.2e-13 78.2 148 43.9
PGR119G0468 Punica granatum HOM05D001419 ORTHO05D001376 6.2e-13 78.2 174 39.7
Aa31LG4G17370 Aethionema arabicum HOM05D001419 ORTHO05D001376 8.1e-13 77.8 159 42.1
PGR119G0966 Punica granatum HOM05D001419 ORTHO05D001376 8.1e-13 77.8 155 39.4
Sp5g13190 Schrenkiella parvula HOM05D001419 ORTHO05D001376 8.1e-13 77.8 158 41.1
Psat6g106800 Pisum sativum HOM05D001419 ORTHO05D001376 1.1e-12 77.4 154 38.3
Rhsim08G0195700 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.1e-12 77.4 153 42.5
vmacro19164 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 1.1e-12 77.4 153 43.1
AL5G28370 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 1.4e-12 77.0 168 39.3
Sed0020575 Sechium edule HOM05D001419 ORTHO05D001376 1.4e-12 77.0 151 41.1
Thhalv10010238m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.8e-12 76.6 170 39.4
BcaB01g00776 Brassica carinata HOM05D001419 ORTHO05D001376 3.1e-12 75.9 159 39.6
Gohir.A11G038200 Gossypium hirsutum HOM05D001419 ORTHO05D001376 3.1e-12 75.9 160 41.9
Actinidia25533 Actinidia chinensis HOM05D001419 ORTHO05D001376 4.0e-12 75.5 142 42.3
Glyma.04G200100 Glycine max HOM05D001419 ORTHO05D001376 4.0e-12 75.5 177 38.4
CANSAT56G3001 Cannabis sativa HOM05D001419 ORTHO05D001376 5.3e-12 75.1 169 37.9
Solyc03g118390.3 Solanum lycopersicum HOM05D001419 ORTHO05D001376 5.3e-12 75.1 161 41.0
Cc04_g05950 Coffea canephora HOM05D001419 ORTHO05D001376 6.9e-12 74.7 174 41.4
arahy.Tifrunner.gnm1.ann1.VH54GQ Arachis hypogaea HOM05D001419 ORTHO05D001376 9.0e-12 74.3 181 37.6
Lalb_Chr23g0272941 Lupinus albus HOM05D001419 ORTHO05D001376 9.0e-12 74.3 166 40.4
Sopen03g037290 Solanum pennellii HOM05D001419 ORTHO05D001376 9.0e-12 74.3 162 42.0
BraA06t24972Z Brassica rapa HOM05D001419 ORTHO05D001376 1.5e-11 73.6 158 37.3
Hma1.2p1_0168F.1_g074060 Hydrangea macrophylla HOM05D001419 ORTHO05D001376 2.0e-11 73.2 117 44.4
Potri.015G104600 Populus trichocarpa HOM05D001419 ORTHO05D001376 2.0e-11 73.2 161 38.5
BcaC07g39361 Brassica carinata HOM05D001419 ORTHO05D001376 4.5e-11 72.0 158 36.7
A06p18890 Brassica napus HOM05D001419 ORTHO05D001376 4.5e-11 72.0 168 35.7
C08p23830 Brassica napus HOM05D001419 ORTHO05D001376 4.5e-11 72.0 158 36.7
BolC8t50009H Brassica oleracea HOM05D001419 ORTHO05D001376 4.5e-11 72.0 158 36.7
ClCG06G001770 Citrullus lanatus HOM05D001419 ORTHO05D001376 4.5e-11 72.0 161 37.3
Eucgr.B00074 Eucalyptus grandis HOM05D001419 ORTHO05D001376 4.5e-11 72.0 150 39.3
Glyma.06G165500 Glycine max HOM05D001419 ORTHO05D001376 4.5e-11 72.0 177 38.4
Nitab4.5_0002046g0180 Nicotiana tabacum HOM05D001419 ORTHO05D001376 4.5e-11 72.0 163 40.5
AT3G48860 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 5.8e-11 71.6 169 36.1
arahy.Tifrunner.gnm1.ann1.EB1MMR Arachis hypogaea HOM05D001419 ORTHO05D001376 5.8e-11 71.6 170 37.6
Gohir.A12G193300 Gossypium hirsutum HOM05D001419 ORTHO05D001376 5.8e-11 71.6 146 42.5
Aa31LG8G2550 Aethionema arabicum HOM05D000710 ORTHO05D000336 7.6e-11 71.2 158 39.2
Gorai.008G210100 Gossypium raimondii HOM05D001419 ORTHO05D001376 7.6e-11 71.2 146 41.8
Medtr3g498775 Medicago truncatula HOM05D001419 ORTHO05D001376 9.9e-11 70.9 154 41.6
Haze_07114 Corylus avellana HOM05D001419 ORTHO05D001376 2.9e-10 69.3 169 37.3
Thecc.02G194800 Theobroma cacao HOM05D001419 ORTHO05D001376 2.9e-10 69.3 179 35.2
DCAR_021409 Daucus carota HOM05D001419 ORTHO05D001376 8.4e-10 67.8 145 40.7
TPR.G21593 Trifolium pratense HOM05D001419 ORTHO05D001376 8.4e-10 67.8 159 40.3
Peaxi162Scf00314g00524 Petunia axillaris HOM05D001419 ORTHO05D001376 1.1e-09 67.4 156 34.6
Dinv18818 Davidia involucrata HOM05D001419 ORTHO05D001376 1.9e-09 66.6 163 37.4
QL10p000923 Quercus lobata HOM05D001419 ORTHO05D001376 1.9e-09 66.6 174 36.2
Actinidia30595 Actinidia chinensis HOM05D001419 ORTHO05D001376 2.4e-09 66.2 164 38.4
ClCG03G004000 Citrullus lanatus HOM05D001419 ORTHO05D001376 3.2e-09 65.9 150 40.7
Lj1g0002101 Lotus japonicus HOM05D001419 ORTHO05D001376 3.2e-09 65.9 172 36.0
Sabra15G0124300 Salix brachista HOM05D001419 ORTHO05D001376 4.2e-09 65.5 146 39.7
Sed0026417 Sechium edule HOM05D001419 ORTHO05D001376 4.2e-09 65.5 163 36.2
CSS0017420 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 5.5e-09 65.1 154 37.0
Lalb_Chr11g0069281 Lupinus albus HOM05D001419 ORTHO05D001376 5.5e-09 65.1 173 37.6
CAN.G843.26 Capsicum annuum HOM05D001419 ORTHO05D001376 7.1e-09 64.7 113 42.5
Nitab4.5_0002450g0040 Nicotiana tabacum HOM05D001419 ORTHO05D001376 7.1e-09 64.7 148 39.9
Cfa018722 Carpinus fangiana HOM05D001419 ORTHO05D001376 9.3e-09 64.3 103 44.7
CsaV3_6G007810 Cucumis sativus L. HOM05D001419 ORTHO05D001376 9.3e-09 64.3 149 36.2
Sed0027714 Sechium edule HOM05D001419 ORTHO05D001376 9.3e-09 64.3 157 37.6
MBI11_g43871_MAGBIO Magnolia biondii HOM05D001419 ORTHO05D001376 1.2e-08 63.9 151 39.7
Atru.chr11.2422 Acer truncatum HOM05D001419 ORTHO05D001376 1.6e-08 63.5 168 38.1
ECA247G2807 Erigeron canadensis HOM05D001419 ORTHO05D001376 1.6e-08 63.5 167 39.5
HanXRQChr02g0034241 Helianthus annuus HOM05D001419 ORTHO05D001376 1.6e-08 63.5 155 38.7
Cpa.g.sc4.110 Carica papaya HOM05D001419 ORTHO05D001376 2.1e-08 63.2 153 37.3
Duzib052G0768 Durio zibethinus HOM05D001419 ORTHO05D001376 2.1e-08 63.2 175 36.6
ATR0582G200 Amborella trichopoda HOM05D001419 ORTHO05D001376 2.7e-08 62.8 149 38.3
CSS0009563 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 2.7e-08 62.8 142 38.7
MELO3C022352.2 Cucumis melo HOM05D001419 ORTHO05D001376 3.5e-08 62.4 149 36.9
Gorai.002G163500 Gossypium raimondii HOM05D001419 ORTHO05D001376 4.6e-08 62.0 176 33.0
GSVIVG01004935001 Vitis vinifera HOM05D001419 ORTHO05D001376 4.6e-08 62.0 148 37.8
Sc04g0010520 Simmondsia chinensis HOM05D001419 ORTHO05D001376 6.0e-08 61.6 104 45.2
MSTRG.11234 Avicennia marina HOM05D001419 ORTHO05D001376 7.9e-08 61.2 164 36.6
CSS0013744 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 7.9e-08 61.2 145 35.9
CSS0018390 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 7.9e-08 61.2 145 35.9
Gohir.A01G140900 Gossypium hirsutum HOM05D001419 ORTHO05D001376 7.9e-08 61.2 176 33.5
SalBow7G3881 Salvia bowleyana HOM05D001419 ORTHO05D001376 7.9e-08 61.2 171 37.4
Ciclev10031078m.g Citrus clementina HOM05D001419 ORTHO05D001376 1.0e-07 60.8 153 37.3
Gohir.D01G131900 Gossypium hirsutum HOM05D001419 ORTHO05D001376 1.0e-07 60.8 176 33.0
CiPaw.11G001500 Carya illinoinensis HOM05D001419 ORTHO05D001376 1.3e-07 60.5 167 34.1
Cpa.g.c28892 Carica papaya HOM05D001419 ORTHO05D001376 1.8e-07 60.1 171 33.9
Sc22g0003510 Simmondsia chinensis HOM05D001419 ORTHO05D001376 1.8e-07 60.1 100 46.0
SGA_v2.0_scaffold40G15618 Striga asiatica HOM05D001419 ORTHO05D001376 1.8e-07 60.1 159 37.1
GSVIVG01008631001 Vitis vinifera HOM05D001419 ORTHO05D001376 2.3e-07 59.7 143 35.7
Aa31LG11G3040 Aethionema arabicum HOM05D001419 ORTHO05D001376 3.0e-07 59.3 152 36.2
DCAR_016354 Daucus carota HOM05D001419 ORTHO05D001376 3.0e-07 59.3 145 37.2
PSO017G0003 Papaver somniferum HOM05D001419 ORTHO05D001376 3.9e-07 58.9 153 37.3
MD16G1129000 Malus domestica HOM05D001419 ORTHO05D001376 5.1e-07 58.5 149 36.2
Sabra12G0077800 Salix brachista HOM05D001419 ORTHO05D001376 6.7e-07 58.2 195 34.4
Migut.I00608 Erythranthe guttata HOM05D001419 ORTHO05D001376 8.7e-07 57.8 151 34.4
CiPaw.06G108400 Carya illinoinensis HOM05D001419 ORTHO05D001376 1.1e-06 57.4 147 36.1
CsaV3_1G009890 Cucumis sativus L. HOM05D001419 ORTHO05D001376 1.1e-06 57.4 148 39.2
Ah.02g114670 Amaranthus hybridus HOM05D001419 ORTHO05D001376 1.5e-06 57.0 175 33.7
Actinidia22125 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.9e-06 56.6 164 36.0
Aqoxy3G01878 Aquilegia oxysepala HOM05D001419 ORTHO05D001376 1.9e-06 56.6 163 35.0
PSO478G0009 Papaver somniferum HOM05D001419 ORTHO05D001376 3.3e-06 55.8 154 35.7
MSTRG.22857 Avicennia marina HOM05D001419 ORTHO05D001376 4.3e-06 55.5 165 34.5
Hund02495 Selenicereus undatus HOM05D001419 ORTHO05D001376 5.6e-06 55.1 144 36.8
CiPaw.05G102800 Carya illinoinensis HOM05D001419 ORTHO05D001376 9.6e-06 54.3 171 33.3


User provided reference genes

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