Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1574.3 796 100.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1540.0 796 98.0
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1524.6 796 97.5
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 0.0e+00 1522.3 796 96.7
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1518.4 796 96.6
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 0.0e+00 1437.2 794 90.3
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 0.0e+00 1191.4 804 75.1
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 0.0e+00 1167.9 803 74.0
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 0.0e+00 1166.0 802 74.7
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 0.0e+00 1078.5 798 67.7
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.5e-299 1032.7 794 65.1
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 4.1e-294 1014.6 799 65.7
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 9.5e-291 1003.4 794 63.9
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 2.0e-288 995.7 792 63.1
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 2.6e-288 995.3 857 61.1
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.9e-287 991.9 792 63.0
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 1.1e-286 989.9 794 63.5
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 4.7e-282 974.5 792 62.4
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 3.2e-278 961.8 790 61.4
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 7.1e-278 960.7 794 61.2
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 7.8e-277 957.2 853 59.6
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 5.6e-275 951.0 800 60.8
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 9.6e-275 950.3 795 60.0
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.6e-274 949.5 799 63.2
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.4e-272 941.8 810 59.4
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 7.6e-272 940.6 793 60.5
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 3.8e-271 938.3 795 61.3
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.1e-270 936.8 794 60.8
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 4.2e-270 934.9 801 60.0
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.6e-269 932.9 799 61.2
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 3.5e-269 931.8 806 59.8
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 1.8e-268 929.5 791 59.2
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 1.1e-267 926.8 791 58.9
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 9.6e-267 923.7 786 59.3
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.2e-263 912.5 798 59.3
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 4.9e-263 911.4 795 57.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 8.4e-263 910.6 793 59.1
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 9.3e-262 907.1 795 60.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.9e-260 901.7 796 57.5
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 1.5e-259 899.8 805 57.1
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.5e-259 899.8 793 57.8
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 4.3e-259 898.3 791 57.9
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 7.4e-259 897.5 795 58.7
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 4.8e-258 894.8 816 58.5
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.8e-257 892.9 798 57.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 2.4e-257 892.5 796 57.4
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 4.0e-257 891.7 787 56.4
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 4.9e-255 884.8 797 56.7
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 8.4e-255 884.0 793 56.1
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.1e-254 883.6 786 57.5
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.7e-253 879.0 791 57.6
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.3e-252 875.9 812 56.5
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.7e-250 868.6 815 56.2
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 4.8e-250 868.2 815 54.0
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.1e-249 867.1 794 56.0
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.4e-249 866.7 792 56.3
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 1.8e-249 866.3 811 54.6
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 6.9e-249 864.4 793 55.6
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 9.0e-249 864.0 791 56.5
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.5e-248 863.2 799 56.1
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.6e-248 862.4 795 55.3
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 2.9e-247 859.0 795 55.0
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 3.8e-247 858.6 794 55.5
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 6.5e-247 857.8 632 67.4
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.9e-246 856.3 803 56.2
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 9.3e-246 854.0 801 56.4
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-245 853.6 796 56.0
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.6e-245 853.2 797 56.0
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.6e-245 853.2 797 56.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 3.0e-244 849.0 806 55.5
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 9.7e-243 844.0 847 52.4
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 4.1e-241 838.6 761 56.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 4.1e-241 838.6 795 55.2
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 4.1e-241 838.6 794 55.0
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 8.5e-239 830.9 794 55.3
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 5.5e-238 828.2 810 56.2
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 5.1e-236 821.6 807 55.0
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.4e-233 813.5 794 54.4
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 9.1e-233 810.8 637 63.4
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 6.3e-226 788.1 797 52.1
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 7.2e-222 774.6 806 54.2
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.4e-220 770.4 804 53.2
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.2e-219 767.3 748 54.3
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 7.5e-219 764.6 790 52.3
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.2e-218 763.1 789 52.6
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 8.8e-212 741.1 782 49.6
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.3e-207 726.5 832 50.0
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 1.1e-206 724.2 665 56.2
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 8.9e-204 714.5 784 50.5
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 4.5e-200 702.2 643 58.8
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.8e-197 693.0 584 61.0
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.0e-196 691.0 809 46.2
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.7e-167 594.0 810 43.5
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 3.8e-162 576.2 610 52.8
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.9e-142 510.8 794 39.8
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.0e-127 461.8 790 39.4
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.3e-114 418.3 823 35.4
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 2.9e-106 390.6 870 33.3
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 6.3e-93 346.3 420 46.4
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 5.4e-92 343.2 297 59.6
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.8e-88 330.9 248 68.5
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.5e-86 325.1 859 30.0
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 2.6e-86 324.3 251 64.5
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 1.1e-84 318.9 259 61.0
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 8.6e-82 309.3 286 52.8
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 1.1e-81 308.9 290 53.1
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.7e-69 268.5 271 51.7
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.1e-51 208.4 181 57.5
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 9.9e-46 189.5 203 46.3
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 5.4e-44 183.7 208 45.7
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-42 178.7 1013 22.6
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 6.2e-40 170.2 145 57.9
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.2e-35 156.0 176 45.5
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.8e-34 152.1 292 34.6
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 4.9e-29 134.0 87 71.3
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 1.8e-18 99.0 649 22.2
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.8e-15 89.0 116 44.0
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 1.0e-13 83.2 222 30.6
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 7.9e-11 73.6 46 69.6
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 2.3e-10 72.0 64 54.7
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 2.0e-06 58.9 49 57.1
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 2.6e-06 58.5 48 58.3


User provided reference genes

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