Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G4308 Fragaria x ananassa HOM05D000385 ORTHO05D000269 6.8e-47 190.3 93 100.0
RcHm_v2.0_Chr4g0426891 Rosa chinensis HOM05D000385 ORTHO05D000269 5.6e-17 90.9 58 75.9
RcHm_v2.0_Chr4g0426901 Rosa chinensis HOM05D000385 ORTHO05D000269 1.2e-16 89.7 58 74.1
RcHm_v2.0_Chr3g0475431 Rosa chinensis HOM05D000385 ORTHO05D000269 4.0e-15 84.7 57 73.7
FvH4_4g21291 Fragaria vesca HOM05D000385 ORTHO05D000269 4.9e-13 77.8 57 68.4
FAN12G2764 Fragaria x ananassa HOM05D000385 ORTHO05D000269 7.1e-12 73.9 56 66.1
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 9.3e-12 73.6 56 66.1
RcHm_v2.0_Chr4g0427031 Rosa chinensis HOM05D000385 ORTHO05D000269 2.7e-11 72.0 56 60.7
RcHm_v2.0_Chr4g0426731 Rosa chinensis HOM05D000385 ORTHO05D000269 6.0e-11 70.9 58 62.1
RcHm_v2.0_Chr4g0426761 Rosa chinensis HOM05D000385 ORTHO05D000269 1.7e-10 69.3 55 60.0
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 6.6e-10 67.4 55 58.2
FvH4_4g21293 Fragaria vesca HOM05D000385 ORTHO05D000269 8.7e-10 67.0 55 58.2
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.7e-10 67.0 55 58.2
FAN20G0262 Fragaria x ananassa HOM05D000015 ORTHO05D001173 1.5e-09 66.2 55 56.4
RcHm_v2.0_Chr4g0426771 Rosa chinensis HOM05D000385 ORTHO05D000269 1.5e-09 66.2 55 56.4
RcHm_v2.0_Chr4g0428091 Rosa chinensis HOM05D000385 ORTHO05D000269 1.9e-09 65.9 56 62.5
FAN05G2615 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.5e-09 65.5 55 56.4
FAN09G3165 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.5e-09 65.5 55 56.4
RcHm_v2.0_Chr4g0426801 Rosa chinensis HOM05D000385 ORTHO05D000269 2.5e-09 65.5 55 56.4
RcHm_v2.0_Chr4g0426981 Rosa chinensis HOM05D000385 ORTHO05D000269 2.5e-09 65.5 68 47.1
Prupe.1G108000 Prunus persica HOM05D000385 ORTHO05D000269 4.3e-09 64.7 55 54.5
Prupe.1G107800 Prunus persica HOM05D000385 ORTHO05D000269 9.6e-09 63.5 55 54.5
MD16G1132900 Malus domestica HOM05D000385 ORTHO05D000269 1.3e-08 63.2 58 55.2
Prupe.1G107500 Prunus persica HOM05D000385 ORTHO05D000269 1.6e-08 62.8 55 56.4
MD13G1143200 Malus domestica HOM05D000385 ORTHO05D000269 2.1e-08 62.4 57 52.6
FAN07G0357 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.8e-08 62.0 56 51.8
MD13G1142900 Malus domestica HOM05D000385 ORTHO05D000269 2.8e-08 62.0 57 50.9
Prupe.1G107900 Prunus persica HOM05D000385 ORTHO05D000269 2.8e-08 62.0 55 52.7
MD13G1143500 Malus domestica HOM05D000385 ORTHO05D000269 4.8e-08 61.2 57 52.6
ECA233G3744 Erigeron canadensis HOM05D000385 ORTHO05D000269 6.2e-08 60.8 57 49.1
MD16G1127700 Malus domestica HOM05D000385 ORTHO05D000269 8.1e-08 60.5 55 54.5
RcHm_v2.0_Chr4g0410851 Rosa chinensis HOM05D016041 ORTHO05D012248 1.4e-07 59.7 47 63.8
MD13G1142200 Malus domestica HOM05D000385 ORTHO05D000269 1.8e-07 59.3 57 52.6
FAN17G2421 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.4e-07 58.9 57 50.9
MD16G1132700 Malus domestica HOM05D000385 ORTHO05D000269 3.1e-07 58.5 58 53.4
FvH4_4g21190 Fragaria vesca HOM05D000385 ORTHO05D000269 5.3e-07 57.8 52 51.9
FAN12G1130 Fragaria x ananassa HOM05D000385 ORTHO05D000269 9.0e-07 57.0 58 50.0
HanXRQChr11g0344391 Helianthus annuus HOM05D000385 ORTHO05D000269 9.0e-07 57.0 57 47.4
Lalb_Chr07g0181801 Lupinus albus HOM05D000385 ORTHO05D000269 9.0e-07 57.0 50 50.0
MD13G1142800 Malus domestica HOM05D000385 ORTHO05D000269 9.0e-07 57.0 57 47.4
MD13G1143000 Malus domestica HOM05D000385 ORTHO05D000269 9.0e-07 57.0 57 47.4
FvH4_4g21140 Fragaria vesca HOM05D000385 ORTHO05D000269 1.2e-06 56.6 58 50.0
Ca_21386_v3 Cicer arietinum L. HOM05D000385 ORTHO05D000269 1.5e-06 56.2 51 47.1
FvH4_4g21850 Fragaria vesca HOM05D000385 ORTHO05D000269 1.5e-06 56.2 54 51.9
HanXRQChr01g0022021 Helianthus annuus HOM05D000385 ORTHO05D000269 1.5e-06 56.2 57 43.9
MD16G1156800 Malus domestica HOM05D000385 ORTHO05D000269 1.5e-06 56.2 57 47.4
Psat0ss1196g0440 Pisum sativum HOM05D000385 ORTHO05D000269 1.5e-06 56.2 51 47.1
RcHm_v2.0_Chr4g0428111 Rosa chinensis HOM05D000385 ORTHO05D000269 2.0e-06 55.8 36 69.4
PGSC0003DMG400008609 Solanum tuberosum HOM05D000385 ORTHO05D000269 2.6e-06 55.5 57 52.6
SGA_v2.0_scaffold104G30238 Striga asiatica HOM05D000385 ORTHO05D000269 2.6e-06 55.5 51 51.0
FAN12G0750 Fragaria x ananassa HOM05D000385 ORTHO05D000269 3.4e-06 55.1 55 49.1
MD16G1133000 Malus domestica HOM05D000385 ORTHO05D000269 3.4e-06 55.1 57 45.6
Prupe.1G107300 Prunus persica HOM05D000385 ORTHO05D000269 3.4e-06 55.1 55 50.9
Dinv29524 Davidia involucrata HOM05D000385 ORTHO05D000269 4.4e-06 54.7 57 47.4
TPR.G12612 Trifolium pratense HOM05D000385 ORTHO05D000269 4.4e-06 54.7 51 47.1
HanXRQChr11g0344381 Helianthus annuus HOM05D000385 ORTHO05D000269 7.6e-06 53.9 57 45.6
Lalb_Chr19g0132901 Lupinus albus HOM05D000385 ORTHO05D000269 7.6e-06 53.9 55 43.6
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 9.9e-06 53.5 53 47.2
Medtr4g123750 Medicago truncatula HOM05D000385 ORTHO05D000269 9.9e-06 53.5 51 45.1


User provided reference genes

Program Settings