Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.6e-165 586.3 353 100.0
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 5.4e-161 571.2 353 97.2
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.8e-133 479.2 358 83.0
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.4e-129 466.1 270 91.5
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.6e-88 330.5 375 61.6
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.0e-82 311.2 347 62.0
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 4.7e-72 275.8 307 57.7
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.0e-71 274.6 376 54.8
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.4e-71 274.2 291 56.4
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 3.9e-71 272.7 377 55.2
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.1e-70 271.2 292 56.5
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 4.4e-70 269.2 364 54.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 4.4e-70 269.2 358 55.6
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.4e-70 268.5 284 58.5
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.3e-69 267.7 364 54.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.2e-69 266.9 386 54.7
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.8e-69 266.5 358 54.7
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 3.7e-69 266.2 380 51.6
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.4e-68 263.5 387 54.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 3.1e-68 263.1 259 59.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.6e-67 260.8 290 54.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.6e-67 260.8 383 53.8
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 5.9e-67 258.8 312 51.3
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 7.7e-67 258.5 392 53.8
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.2e-66 256.9 344 57.8
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.9e-66 256.5 351 56.1
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.1e-65 254.6 366 54.4
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.9e-65 253.8 352 55.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.5e-65 253.4 281 54.4
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.2e-65 253.1 364 51.1
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.2e-65 253.1 359 56.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 5.5e-65 252.3 487 45.0
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 7.2e-65 251.9 266 54.1
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.4e-65 251.5 266 54.1
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.6e-64 250.8 244 60.7
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.6e-64 250.8 284 52.5
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.1e-64 250.4 282 53.2
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 3.6e-64 249.6 262 56.9
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 8.0e-64 248.4 384 51.0
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.0e-63 248.1 364 54.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.0e-63 248.1 290 54.1
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.4e-63 247.7 291 52.2
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.3e-63 246.9 289 52.9
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.0e-63 246.5 393 50.9
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 5.2e-63 245.7 367 50.7
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 6.7e-63 245.4 330 53.0
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.3e-62 243.0 278 52.5
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 4.4e-62 242.7 386 50.8
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 7.5e-62 241.9 273 52.0
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 7.5e-62 241.9 273 52.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 9.7e-62 241.5 291 50.2
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.3e-61 241.1 352 54.3
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 3.7e-61 239.6 371 51.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.8e-61 239.2 285 51.2
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 4.8e-61 239.2 215 63.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.1e-60 238.0 265 54.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.4e-60 237.7 276 53.6
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.8e-60 237.3 362 50.3
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 4.1e-60 236.1 267 52.1
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 7.0e-60 235.3 394 48.5
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.2e-59 234.6 268 51.9
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.0e-59 233.8 281 51.6
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.7e-59 233.4 284 51.1
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 4.5e-59 232.6 290 49.0
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 5.9e-59 232.3 284 50.7
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 7.7e-59 231.9 277 51.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 7.7e-59 231.9 266 52.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 7.7e-59 231.9 374 50.3
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 7.7e-59 231.9 295 50.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.5e-57 227.6 312 47.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.5e-57 226.9 278 48.2
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 2.5e-57 226.9 285 49.1
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 4.2e-57 226.1 258 51.2
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 4.2e-57 226.1 335 52.8
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.2e-57 226.1 403 51.1
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 5.5e-57 225.7 253 49.4
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 7.2e-57 225.3 352 52.0
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 7.2e-57 225.3 379 50.1
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 1.2e-56 224.6 354 50.6
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.1e-56 223.8 254 52.4
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.7e-56 223.4 343 53.4
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.5e-54 217.6 274 49.6
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.4e-54 216.5 331 42.9
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 9.8e-54 214.9 278 47.5
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.2e-53 213.8 170 65.3
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.1e-52 211.5 182 61.0
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.4e-52 211.1 400 46.2
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.8e-52 210.7 268 48.1
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 4.1e-52 209.5 353 49.9
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 9.1e-52 208.4 382 45.3
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.7e-51 206.8 214 53.7
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 4.5e-51 206.1 350 50.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 7.7e-51 205.3 271 46.1
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.0e-50 204.9 262 49.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.3e-50 204.5 183 60.7
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.3e-50 203.8 375 45.9
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 4.2e-49 199.5 414 41.1
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 9.5e-49 198.4 241 49.4
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.4e-47 194.5 262 47.3
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 3.7e-45 186.4 195 50.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.6e-43 181.0 230 50.4
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 4.5e-43 179.5 271 43.9
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.5e-43 179.5 269 45.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.9e-42 176.8 170 58.2
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.0e-39 166.8 252 44.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 8.9e-39 165.2 223 43.5
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 6.0e-35 152.5 223 41.3
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 1.7e-34 151.0 276 36.6
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.6e-32 144.4 209 43.1
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 6.4e-29 132.5 209 38.8
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.3e-26 124.0 141 53.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.9e-18 96.7 152 43.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.7e-16 89.7 156 39.1
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.2e-14 85.1 64 68.8
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 3.5e-11 73.6 65 56.9
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 3.1e-07 60.5 200 46.0
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 6.9e-07 59.3 133 35.3


User provided reference genes

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