Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G4075 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.8e-174 615.9 337 100.0
FvH4_4g09960 Fragaria vesca HOM05D001439 ORTHO05D046442 2.3e-113 412.9 248 97.6
FAN12G1448 Fragaria x ananassa HOM05D001439 ORTHO05D046442 4.6e-85 318.9 248 77.8
FAN16G2831 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.4e-78 297.4 177 85.3
FAN11G1486 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.7e-77 293.1 176 85.8
FvH4_3g08620 Fragaria vesca HOM05D001439 ORTHO05D002726 1.0e-76 291.2 176 84.7
FAN25G1066 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.7e-76 290.4 176 84.7
FAN21G0276 Fragaria x ananassa HOM05D001439 ORTHO05D002726 3.9e-76 289.3 177 84.2
RcHm_v2.0_Chr5g0009221 Rosa chinensis HOM05D001439 ORTHO05D002726 9.9e-64 248.1 149 82.6
Prupe.4G052600 Prunus persica HOM05D001439 ORTHO05D002726 3.5e-53 213.0 173 65.9
MD10G1289100 Malus domestica HOM05D001439 ORTHO05D002726 1.2e-48 198.0 165 63.6
MD05G1310200 Malus domestica HOM05D001439 ORTHO05D002726 3.4e-48 196.4 172 62.2
CiPaw.09G063400 Carya illinoinensis HOM05D001439 ORTHO05D002726 1.8e-44 184.1 196 55.6
Haze_06382 Corylus avellana HOM05D001439 ORTHO05D002726 7.4e-43 178.7 197 55.3
Cfa000527 Carpinus fangiana HOM05D001439 ORTHO05D002726 2.2e-39 167.2 183 54.1
GSVIVG01021113001 Vitis vinifera HOM05D001439 ORTHO05D002726 2.8e-34 150.2 175 49.1
QL05p042276 Quercus lobata HOM05D001439 ORTHO05D002726 1.1e-33 148.3 172 49.4
Sabra04G0030600 Salix brachista HOM05D001439 ORTHO05D002726 2.7e-29 133.7 193 45.1
Sed0010792 Sechium edule HOM05D001439 ORTHO05D002726 1.8e-28 131.0 192 43.2
Glyma.13G235300 Glycine max HOM05D001439 ORTHO05D002726 5.7e-27 125.9 200 41.0
Potri.004G048675 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.3e-26 124.8 182 46.7
Thecc.06G181000 Theobroma cacao HOM05D001439 ORTHO05D002726 2.2e-26 124.0 158 45.6
ClCG01G023260 Citrullus lanatus HOM05D001439 ORTHO05D002726 4.8e-26 122.9 162 42.6
Glyma.13G175200 Glycine max HOM05D001439 ORTHO05D002726 6.3e-26 122.5 180 41.1
Sed0000156 Sechium edule HOM05D001439 ORTHO05D002726 6.3e-26 122.5 166 44.0
arahy.Tifrunner.gnm1.ann1.1H2VR5 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.5e-24 116.7 196 39.3
arahy.Tifrunner.gnm1.ann1.49JRJ0 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.5e-24 116.7 196 39.3
CsaV3_6G050410 Cucumis sativus L. HOM05D001439 ORTHO05D002726 3.5e-24 116.7 165 43.6
Ca_18589_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 5.9e-24 115.9 179 39.7
VMungo0251G2748 Vigna mungo HOM05D001439 ORTHO05D002726 5.9e-24 115.9 180 41.7
MELO3C007260.2 Cucumis melo HOM05D001439 ORTHO05D002726 1.0e-23 115.2 169 40.8
Glyma.07G201200 Glycine max HOM05D001439 ORTHO05D002726 1.3e-23 114.8 198 40.4
TWI38G1950 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.7e-23 114.4 175 44.0
COL.COLO4_31415 Corchorus olitorius HOM05D001439 ORTHO05D002726 5.0e-23 112.8 151 44.4
VMungo0540G1437 Vigna mungo HOM05D001439 ORTHO05D002726 1.1e-22 111.7 171 43.9
Phvul.002G232200 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 1.9e-22 110.9 198 39.9
Dinv17354 Davidia involucrata HOM05D001439 ORTHO05D002726 4.2e-22 109.8 172 40.7
PGR004G2384 Punica granatum HOM05D001439 ORTHO05D002726 1.6e-21 107.8 175 40.0
Lalb_Chr16g0384011 Lupinus albus HOM05D001439 ORTHO05D002726 6.1e-21 105.9 174 38.5
Gohir.A06G211700 Gossypium hirsutum HOM05D001439 ORTHO05D002726 8.0e-21 105.5 151 42.4
Lalb_Chr15g0089681 Lupinus albus HOM05D001439 ORTHO05D002726 3.0e-20 103.6 197 37.1
Gorai.010G243500 Gossypium raimondii HOM05D001439 ORTHO05D002726 5.2e-20 102.8 161 39.1
Ciclev10014022m.g Citrus clementina HOM05D001439 ORTHO05D002726 8.8e-20 102.1 186 36.6
CANSAT35G2047 Cannabis sativa HOM05D001439 ORTHO05D002726 1.1e-19 101.7 149 40.9
arahy.Tifrunner.gnm1.ann1.DG2K05 Arachis hypogaea HOM05D001439 ORTHO05D002726 2.0e-19 100.9 169 37.9
Cpa.g.sc27.3 Carica papaya HOM05D001439 ORTHO05D002726 7.5e-19 99.0 137 43.1
Duzib235G0176 Durio zibethinus HOM05D001439 ORTHO05D002726 1.3e-18 98.2 153 37.3
Phvul.006G182000 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 1.3e-18 98.2 165 38.8
Psat7g116080 Pisum sativum HOM05D001439 ORTHO05D002726 1.3e-18 98.2 192 34.9
Medtr2g014490 Medicago truncatula HOM05D001439 ORTHO05D002726 2.2e-18 97.4 197 34.5
TPR.G11655 Trifolium pratense HOM05D001439 ORTHO05D002726 2.8e-18 97.1 189 36.0
Ca_00363_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 4.8e-18 96.3 193 35.8
Gorai.010G256900 Gossypium raimondii HOM05D001439 ORTHO05D002726 4.1e-17 93.2 146 37.0
CSS0043150 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 5.3e-17 92.8 156 42.3
Potri.011G057700 Populus trichocarpa HOM05D001439 ORTHO05D002726 5.3e-17 92.8 135 45.9
Lj4g0015660 Lotus japonicus HOM05D001439 ORTHO05D002726 7.0e-17 92.4 143 42.0
Psat1g202960 Pisum sativum HOM05D001439 ORTHO05D002726 7.0e-17 92.4 195 33.8
Sabra11G0039900 Salix brachista HOM05D001439 ORTHO05D002726 7.0e-17 92.4 138 44.9
TPR.G19912 Trifolium pratense HOM05D001439 ORTHO05D002726 1.2e-16 91.7 177 37.3
TAR627G0298 Trochodendron aralioides HOM05D001439 ORTHO05D002726 1.2e-16 91.7 142 41.5
FAN09G0796 Fragaria x ananassa HOM05D001439 ORTHO05D002726 4.5e-16 89.7 203 36.0
Manes.17G049300 Manihot esculenta HOM05D001439 ORTHO05D002726 7.7e-16 89.0 159 37.1
FAN05G3838 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.3e-15 88.2 207 33.8
Ciclev10014023m.g Citrus clementina HOM05D001439 ORTHO05D002726 2.2e-15 87.4 152 42.1
QL08p040227 Quercus lobata HOM05D001439 ORTHO05D002726 3.8e-15 86.7 159 36.5
Eucgr.D00596 Eucalyptus grandis HOM05D001439 ORTHO05D002726 8.5e-15 85.5 172 38.4
TWI38G1102 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.9e-14 84.3 174 36.2
TAR626G0121 Trochodendron aralioides HOM05D001439 ORTHO05D002726 2.5e-14 84.0 143 37.8
Lalb_Chr20g0121581 Lupinus albus HOM05D001439 ORTHO05D002726 9.4e-14 82.0 179 34.1
arahy.Tifrunner.gnm1.ann1.P48F6M Arachis hypogaea HOM05D001439 ORTHO05D002726 2.1e-13 80.9 161 32.9
Cfa014661 Carpinus fangiana HOM05D001439 ORTHO05D002726 2.7e-13 80.5 185 33.5
Lj2C292T8 Lonicera japonica HOM05D001439 ORTHO05D002726 2.7e-13 80.5 174 35.1
Gohir.A06G211600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 6.1e-13 79.3 144 33.3
Lj6g0010323 Lotus japonicus HOM05D001439 ORTHO05D002726 6.1e-13 79.3 207 32.4
GSVIVG01020605001 Vitis vinifera HOM05D001439 ORTHO05D002726 6.1e-13 79.3 154 37.0
Cpa.g.sc83.97 Carica papaya HOM05D001439 ORTHO05D002726 8.0e-13 79.0 152 35.5
Gohir.D06G209600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 8.0e-13 79.0 144 33.3
Migut.M01107 Erythranthe guttata HOM05D001439 ORTHO05D002726 1.4e-12 78.2 156 37.2
Nn1g04237 Nelumbo nucifera HOM05D001439 ORTHO05D002726 1.4e-12 78.2 144 37.5
Lalb_Chr18g0059381 Lupinus albus HOM05D001439 ORTHO05D002726 1.8e-12 77.8 181 30.4
Haze_13244 Corylus avellana HOM05D001439 ORTHO05D002726 4.0e-12 76.6 164 35.4
Gohir.D06G209500 Gossypium hirsutum HOM05D001439 ORTHO05D002726 1.2e-11 75.1 146 32.2
Duzib160G0499 Durio zibethinus HOM05D001439 ORTHO05D002726 1.5e-11 74.7 116 40.5
Thecc.02G186300 Theobroma cacao HOM05D001439 ORTHO05D002726 1.5e-11 74.7 159 35.2
Actinidia10999 Actinidia chinensis HOM05D001439 ORTHO05D002726 7.5e-11 72.4 176 31.8
FAN14G5737 Fragaria x ananassa HOM05D001439 ORTHO05D002726 7.5e-11 72.4 186 31.7
Dinv06859 Davidia involucrata HOM05D001439 ORTHO05D002726 1.7e-10 71.2 154 33.1
Nn1g06413 Nelumbo nucifera HOM05D001439 ORTHO05D002726 2.2e-10 70.9 146 32.2
FvH4_6g26700 Fragaria vesca HOM05D001439 ORTHO05D002726 2.8e-10 70.5 186 31.2
CSS0016347 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 4.8e-10 69.7 155 32.3
CSS0047003 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 4.8e-10 69.7 155 32.3
CAN.G529.57 Capsicum annuum HOM05D001439 ORTHO05D002726 6.3e-10 69.3 141 34.8
Duzib132G0536 Durio zibethinus HOM05D001439 ORTHO05D002726 6.3e-10 69.3 159 32.1
vmacro12346 Vaccinium macrocarpon HOM05D001439 ORTHO05D002726 6.3e-10 69.3 154 36.4
Medtr4g088375 Medicago truncatula HOM05D001439 ORTHO05D002726 1.1e-09 68.6 174 33.9
Lj1C697G7 Lonicera japonica HOM05D001439 ORTHO05D002726 3.1e-09 67.0 184 33.2
FAN02G3093 Fragaria x ananassa HOM05D001439 ORTHO05D002726 4.1e-09 66.6 168 31.0
RcHm_v2.0_Chr2g0127081 Rosa chinensis HOM05D001439 ORTHO05D002726 4.1e-09 66.6 160 32.5
Hma1.2p1_0558F.1_g178470 Hydrangea macrophylla HOM05D001439 ORTHO05D002726 7.0e-09 65.9 184 31.5
Gorai.008G155100 Gossypium raimondii HOM05D001439 ORTHO05D002726 1.2e-08 65.1 185 31.4
Manes.13G141800 Manihot esculenta HOM05D001439 ORTHO05D002726 1.2e-08 65.1 157 29.9
Rhsim06G0136900 Rhododendron simsii HOM05D001439 ORTHO05D002726 2.7e-08 63.9 152 34.9
RhsimUnG0013600 Rhododendron simsii HOM05D001439 ORTHO05D002726 2.7e-08 63.9 152 34.9
Gohir.D12G143800 Gossypium hirsutum HOM05D001439 ORTHO05D002726 3.5e-08 63.5 185 31.9
Glyma.06G288900 Glycine max HOM05D001439 ORTHO05D002726 4.5e-08 63.2 155 31.0
Peaxi162Scf00926g00006 Petunia axillaris HOM05D001439 ORTHO05D002726 1.0e-07 62.0 141 32.6
SGA_v2.0_scaffold22G09664 Striga asiatica HOM05D001439 ORTHO05D002726 1.0e-07 62.0 145 33.8
AUR62038987 Chenopodium quinoa HOM05D001439 ORTHO05D002726 2.2e-07 60.8 155 28.4
EL10Ac9g20819 Beta vulgaris HOM05D001439 ORTHO05D002726 2.9e-07 60.5 159 27.7
Sabra07G0109800 Salix brachista HOM05D001439 ORTHO05D002726 2.9e-07 60.5 162 30.2
Atru.chr6.2869 Acer truncatum HOM05D001439 ORTHO05D002726 6.5e-07 59.3 168 29.8
CiPaw.03G181600 Carya illinoinensis HOM05D001439 ORTHO05D002726 8.5e-07 58.9 151 31.1
Potri.017G016200 Populus trichocarpa HOM05D001439 ORTHO05D002726 8.5e-07 58.9 159 29.6
Ca_18919_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 1.9e-06 57.8 151 29.1
Migut.H01470 Erythranthe guttata HOM05D001439 ORTHO05D002726 1.9e-06 57.8 142 31.0
Solyc02g077660.3 Solanum lycopersicum HOM05D001439 ORTHO05D002726 1.9e-06 57.8 140 30.7
TWI23G0951 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.9e-06 57.8 160 31.9
Sabra17G0012700 Salix brachista HOM05D001439 ORTHO05D002726 4.2e-06 56.6 182 30.8
THA.LOC104826040 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 4.2e-06 56.6 181 28.2
Zm00001eb295800 Zea mays HOM05D001439 ORTHO05D002726 5.5e-06 56.2 175 29.7
DCAR_004044 Daucus carota HOM05D001439 ORTHO05D002726 7.2e-06 55.8 178 29.8
TWI14G1311 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 9.5e-06 55.5 157 31.8


User provided reference genes

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