Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G4026 Fragaria x ananassa HOM05D002608 ORTHO05D035563 1.9e-45 185.7 104 100.0
FvH4_4g19950 Fragaria vesca HOM05D002608 ORTHO05D035563 3.3e-42 174.9 99 100.0
FAN07G2489 Fragaria x ananassa HOM05D002608 ORTHO05D035563 6.7e-11 70.9 52 75.0
BcaB01g02695 Brassica carinata HOM05D002608 ORTHO05D003838 2.8e-09 65.5 108 47.2
Lj1g0021618 Lotus japonicus HOM05D002608 ORTHO05D003838 2.8e-09 65.5 100 51.0
BcaC01g04630 Brassica carinata HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
BcaC03g16352 Brassica carinata HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
A02p26260 Brassica napus HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
A03p29350 Brassica napus HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
C02p41770 Brassica napus HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
C03p35460 Brassica napus HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
BolC2t10192H Brassica oleracea HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
BolC3t15861H Brassica oleracea HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
BraA02t07627Z Brassica rapa HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
BraA03t12132Z Brassica rapa HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
Sp6g06010 Schrenkiella parvula HOM05D002608 ORTHO05D003838 4.8e-09 64.7 108 48.1
Lsat_1_v5_gn_1_55601 Lactuca sativa HOM05D002608 ORTHO05D003838 6.3e-09 64.3 111 46.8
AL6G45870 Arabidopsis lyrata HOM05D002608 ORTHO05D003838 8.2e-09 63.9 108 46.3
CiPaw.10G143500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.1e-08 63.5 76 53.9
Thhalv10028395m.g Eutrema salsugineum HOM05D002608 ORTHO05D003838 1.4e-08 63.2 107 47.7
Glyma.03G172200 Glycine max HOM05D002608 ORTHO05D003838 1.4e-08 63.2 100 54.0
AT4G11420 Arabidopsis thaliana HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 47.2
BcaB01g01651 Brassica carinata HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
BcaC04g21147 Brassica carinata HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
A09p27650 Brassica napus HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
C09p35000 Brassica napus HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
BolC9t56346H Brassica oleracea HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
BraA09t38334Z Brassica rapa HOM05D002608 ORTHO05D003838 1.8e-08 62.8 108 44.4
Sabra13G0010400 Salix brachista HOM05D002608 ORTHO05D003838 1.8e-08 62.8 81 53.1
Carub.0006s3036 Capsella rubella HOM05D002608 ORTHO05D003838 2.4e-08 62.4 108 45.4
CiPaw.09G189400 Carya illinoinensis HOM05D002608 ORTHO05D003838 2.4e-08 62.4 76 53.9
VMungo1383G2288 Vigna mungo HOM05D002608 ORTHO05D003838 2.4e-08 62.4 103 48.5
Aa31LG6G6570 Aethionema arabicum HOM05D002608 ORTHO05D003838 3.1e-08 62.0 54 74.1
Medtr7g098840 Medicago truncatula HOM05D002608 ORTHO05D017777 3.1e-08 62.0 65 60.0
Ca_08783_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 4.1e-08 61.6 100 52.0
Glyma.19G173100 Glycine max HOM05D002608 ORTHO05D003838 4.1e-08 61.6 100 53.0
Phvul.001G169900 Phaseolus vulgaris HOM05D002608 ORTHO05D003838 4.1e-08 61.6 100 53.0
Thecc.05G318700 Theobroma cacao HOM05D002608 ORTHO05D003838 4.1e-08 61.6 121 40.5
GSVIVG01031192001 Vitis vinifera HOM05D002608 ORTHO05D003838 4.1e-08 61.6 104 50.0
Ca_08785_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 5.3e-08 61.2 100 53.0
Medtr7g099920 Medicago truncatula HOM05D002608 ORTHO05D003838 5.3e-08 61.2 101 47.5
Psat3g048960 Pisum sativum HOM05D002608 ORTHO05D003838 5.3e-08 61.2 69 59.4
QL05p010646 Quercus lobata HOM05D002608 ORTHO05D003838 5.3e-08 61.2 95 48.4
QL07p047431 Quercus lobata HOM05D002608 ORTHO05D003838 5.3e-08 61.2 95 48.4
BcaB05g23828 Brassica carinata HOM05D002608 ORTHO05D003838 9.1e-08 60.5 108 43.5
Cfa017421 Carpinus fangiana HOM05D002608 ORTHO05D003838 9.1e-08 60.5 70 54.3
Haze_20749 Corylus avellana HOM05D002608 ORTHO05D003838 9.1e-08 60.5 70 54.3
Eucgr.H03271 Eucalyptus grandis HOM05D002608 ORTHO05D003838 9.1e-08 60.5 104 50.0
Lalb_Chr01g0019231 Lupinus albus HOM05D002608 ORTHO05D003838 9.1e-08 60.5 100 51.0
Potri.005G021400 Populus trichocarpa HOM05D002608 ORTHO05D003838 9.1e-08 60.5 83 51.8
Sc15g0004560 Simmondsia chinensis HOM05D002608 ORTHO05D003838 1.2e-07 60.1 84 56.0
A03p54220 Brassica napus HOM05D002608 ORTHO05D003838 1.5e-07 59.7 52 67.3
Dinv24411 Davidia involucrata HOM05D002608 ORTHO05D003838 1.5e-07 59.7 104 49.0
Potri.013G011900 Populus trichocarpa HOM05D002608 ORTHO05D003838 1.5e-07 59.7 81 51.9
QL03p017837 Quercus lobata HOM05D002608 ORTHO05D003838 1.5e-07 59.7 112 41.1
QL93p2009_0049 Quercus lobata HOM05D002608 ORTHO05D003838 1.5e-07 59.7 112 41.1
Cfa006672 Carpinus fangiana HOM05D002608 ORTHO05D003838 2.0e-07 59.3 111 42.3
Haze_04099 Corylus avellana HOM05D002608 ORTHO05D003838 2.0e-07 59.3 111 42.3
Lalb_Chr20g0113231 Lupinus albus HOM05D002608 ORTHO05D003838 2.0e-07 59.3 100 52.0
Manes.09G174300 Manihot esculenta HOM05D002608 ORTHO05D003838 2.0e-07 59.3 104 47.1
PGR031G1858 Punica granatum HOM05D002608 ORTHO05D003838 2.0e-07 59.3 98 48.0
RcHm_v2.0_Chr3g0456551 Rosa chinensis HOM05D002608 ORTHO05D003838 2.0e-07 59.3 109 46.8
THA.LOC104814584 Tarenaya hassleriana HOM05D002608 ORTHO05D003838 2.0e-07 59.3 98 49.0
TWI56G0709 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 2.0e-07 59.3 84 54.8
Sabra05G0027400 Salix brachista HOM05D002608 ORTHO05D003838 2.6e-07 58.9 101 49.5
CsaV3_1G037230 Cucumis sativus L. HOM05D002608 ORTHO05D003838 3.4e-07 58.5 100 49.0
Lj2A99G56 Lonicera japonica HOM05D002608 ORTHO05D003838 3.4e-07 58.5 112 46.4
Hund07119 Selenicereus undatus HOM05D002608 ORTHO05D003838 3.4e-07 58.5 110 40.0
TWI36G0315 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 3.4e-07 58.5 84 54.8
TAR365G0313 Trochodendron aralioides HOM05D002608 ORTHO05D003838 3.4e-07 58.5 112 46.4
CARHR255150 Cardamine hirsuta HOM05D002608 ORTHO05D003838 4.5e-07 58.2 99 46.5
MELO3C035497.2 Cucumis melo HOM05D002608 ORTHO05D003838 4.5e-07 58.2 98 50.0
Aa31LG9G10810 Aethionema arabicum HOM05D002608 ORTHO05D003838 5.9e-07 57.8 100 46.0
COL.COLO4_03801 Corchorus olitorius HOM05D002608 ORTHO05D003838 5.9e-07 57.8 120 37.5
Gohir.A08G207600 Gossypium hirsutum HOM05D002608 ORTHO05D003838 5.9e-07 57.8 86 43.0
Rhsim05G0135800 Rhododendron simsii HOM05D002608 ORTHO05D003838 5.9e-07 57.8 104 49.0
vmacro06489 Vaccinium macrocarpon HOM05D002608 ORTHO05D003838 5.9e-07 57.8 104 50.0
COL.COLO4_34018 Corchorus olitorius HOM05D002608 ORTHO05D017777 7.7e-07 57.4 110 42.7
CsaV3_1G037250 Cucumis sativus L. HOM05D002608 ORTHO05D003838 7.7e-07 57.4 100 48.0
DCAR_003377 Daucus carota HOM05D002608 ORTHO05D003838 7.7e-07 57.4 103 44.7
Duzib106G0606 Durio zibethinus HOM05D002608 ORTHO05D003838 7.7e-07 57.4 120 37.5
Gorai.007G303300 Gossypium raimondii HOM05D002608 ORTHO05D003838 7.7e-07 57.4 84 45.2
Lsat_1_v5_gn_9_123961 Lactuca sativa HOM05D002608 ORTHO05D003838 7.7e-07 57.4 97 45.4
Solyc09g010460.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 7.7e-07 57.4 110 41.8
Sopen09g005200 Solanum pennellii HOM05D002608 ORTHO05D003838 7.7e-07 57.4 110 41.8
PGSC0003DMG400008926 Solanum tuberosum HOM05D002608 ORTHO05D003838 7.7e-07 57.4 110 41.8
Gohir.A11G268500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.0e-06 57.0 84 44.0
Gohir.D11G278500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.0e-06 57.0 84 44.0
Gorai.004G238100 Gossypium raimondii HOM05D002608 ORTHO05D003838 1.0e-06 57.0 84 44.0
Gorai.007G300600 Gossypium raimondii HOM05D002608 ORTHO05D003838 1.0e-06 57.0 84 44.0
Atru.chr2.118 Acer truncatum HOM05D002608 ORTHO05D003838 1.3e-06 56.6 92 50.0
Cpa.g.sc48.127 Carica papaya HOM05D002608 ORTHO05D003838 1.3e-06 56.6 84 46.4
ClCG03G017600 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.3e-06 56.6 100 49.0
HanXRQChr09g0247971 Helianthus annuus HOM05D002608 ORTHO05D003838 1.3e-06 56.6 70 54.3
Prupe.6G317100 Prunus persica HOM05D002608 ORTHO05D003838 1.3e-06 56.6 102 47.1
Thecc.01G130800 Theobroma cacao HOM05D002608 ORTHO05D003838 1.3e-06 56.6 86 46.5
TAR383G0809 Trochodendron aralioides HOM05D002608 ORTHO05D003838 1.3e-06 56.6 96 47.9
ClCG03G006160 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.7e-06 56.2 100 48.0
Ciclev10000154m.g Citrus clementina HOM05D002608 ORTHO05D003838 1.7e-06 56.2 99 49.5
Dinv30849 Davidia involucrata HOM05D002608 ORTHO05D003838 1.7e-06 56.2 96 49.0
TWI12G0370 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 1.7e-06 56.2 92 50.0
BraA03t14483Z Brassica rapa HOM05D002608 ORTHO05D003838 2.2e-06 55.8 53 64.2
CSS0020825 Camellia sinensis var. sinensis HOM05D002608 ORTHO05D003838 2.2e-06 55.8 103 45.6
Duzib177G0789 Durio zibethinus HOM05D002608 ORTHO05D003838 2.2e-06 55.8 120 37.5
Manes.08G114400 Manihot esculenta HOM05D002608 ORTHO05D003838 2.2e-06 55.8 102 47.1
Aqoxy7G00914 Aquilegia oxysepala HOM05D002608 ORTHO05D003838 2.9e-06 55.5 96 46.9
ClCG03G006190 Citrullus lanatus HOM05D002608 ORTHO05D003838 2.9e-06 55.5 97 49.5
Hma1.2p1_0472F.1_g159760 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 2.9e-06 55.5 100 49.0
ECA240G3079 Erigeron canadensis HOM05D002608 ORTHO05D003838 3.8e-06 55.1 101 44.6
Oeu049216.1 Olea europaea HOM05D002608 ORTHO05D003838 3.8e-06 55.1 112 44.6
Sc02g0009020 Simmondsia chinensis HOM05D002608 ORTHO05D003838 5.0e-06 54.7 98 43.9
CsaV3_1G037240 Cucumis sativus L. HOM05D002608 ORTHO05D003838 6.5e-06 54.3 100 47.0
Gohir.D08G224200 Gossypium hirsutum HOM05D002608 ORTHO05D003838 6.5e-06 54.3 84 42.9
BcaNung03267 Brassica carinata HOM05D002608 ORTHO05D003838 8.5e-06 53.9 81 49.4
CAN.G97.14 Capsicum annuum HOM05D002608 ORTHO05D003838 8.5e-06 53.9 111 43.2
Gohir.A13G119801 Gossypium hirsutum HOM05D002608 ORTHO05D017777 8.5e-06 53.9 56 51.8
Lsat_1_v5_gn_5_106240 Lactuca sativa HOM05D002608 ORTHO05D003838 8.5e-06 53.9 106 42.5
Medtr7g087180 Medicago truncatula HOM05D002608 ORTHO05D003838 8.5e-06 53.9 88 51.1
Hund12489 Selenicereus undatus HOM05D002608 ORTHO05D003838 8.5e-06 53.9 97 46.4


User provided reference genes

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