Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3887 Fragaria x ananassa HOM05D006782 ORTHO05D203567 4.7e-86 321.2 173 100.0
FAN08G0293 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-54 216.5 116 98.3
FAN08G0921 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-54 216.5 116 98.3
FAN19G2580 Fragaria x ananassa HOM05D006782 ORTHO05D207724 1.6e-54 216.5 116 98.3
FAN10G3762 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.7e-54 215.3 117 96.6
FAN13G2828 Fragaria x ananassa HOM05D006782 ORTHO05D204244 9.0e-53 210.7 116 95.7
FAN11G3638 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.5e-51 204.5 118 92.4
FAN03G3266 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.5e-50 202.6 116 94.0
FAN02G2972 Fragaria x ananassa HOM05D006782 ORTHO05D207747 7.9e-49 197.6 115 92.2
FAN18G3333 Fragaria x ananassa HOM05D006782 ORTHO05D201160 3.1e-45 185.7 116 87.1
FAN10G1058 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.3e-45 184.9 116 85.3
FAN02G1533 Fragaria x ananassa HOM05D006782 ORTHO05D202813 2.6e-44 182.6 116 83.6
FAN26G2872 Fragaria x ananassa HOM05D006782 ORTHO05D208352 2.6e-44 182.6 118 84.7
FAN22G1259 Fragaria x ananassa HOM05D006782 ORTHO05D209502 1.0e-43 180.6 123 82.1
FAN22G2115 Fragaria x ananassa HOM05D006782 ORTHO05D201415 1.1e-42 177.2 116 83.6
FAN14G5237 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.1e-41 172.9 116 81.9
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.0e-40 170.6 118 80.5
FAN21G2650 Fragaria x ananassa HOM05D006782 ORTHO05D202800 1.0e-40 170.6 119 79.8
FAN09G3720 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.4e-40 170.2 116 80.2
FAN16G2026 Fragaria x ananassa HOM05D006782 ORTHO05D205423 1.8e-40 169.9 116 81.0
FAN06G2652 Fragaria x ananassa HOM05D006782 ORTHO05D032388 5.1e-40 168.3 95 94.7
FAN11G0567 Fragaria x ananassa HOM05D006782 ORTHO05D203986 6.7e-40 167.9 113 80.5
FAN15G2232 Fragaria x ananassa HOM05D006782 ORTHO05D206330 8.8e-40 167.5 109 83.5
FAN18G0670 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.7e-38 163.3 116 78.4
FAN06G4068 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.1e-37 159.1 97 86.6
FAN06G5044 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.0e-36 156.4 99 83.8
FAN11G2061 Fragaria x ananassa HOM05D006782 ORTHO05D204056 1.7e-35 153.3 115 75.7
FAN12G1707 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.5e-34 148.3 100 83.0
FAN19G0520 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.6e-33 145.6 104 79.8
FAN07G0282 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.0e-27 127.5 77 92.2
FAN24G1064 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.0e-27 127.5 77 87.0
FAN18G2750 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.2e-24 115.2 76 85.5
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 8.8e-24 114.4 84 76.2
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-23 114.0 84 75.0
FAN12G1891 Fragaria x ananassa HOM05D006782 ORTHO05D207534 2.0e-23 113.2 67 89.6
FAN17G1691 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.3e-23 112.5 84 73.8
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.5e-23 111.3 83 77.1
FAN01G3131 Fragaria x ananassa HOM05D006782 ORTHO05D011275 9.7e-23 110.9 84 72.6
FAN06G2964 Fragaria x ananassa HOM05D000020 ORTHO05D007189 9.7e-23 110.9 83 77.1
FAN06G0350 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.7e-22 110.2 83 75.9
FAN25G1405 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.7e-22 110.2 83 75.9
FvH4_5g19441 Fragaria vesca HOM05D006782 ORTHO05D011275 2.2e-22 109.8 78 83.3
FAN14G2649 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.2e-22 109.8 83 75.9
FAN14G1719 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.8e-22 109.4 80 80.0
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 2.8e-22 109.4 84 72.6
FvH4_7g23880 Fragaria vesca HOM05D000020 ORTHO05D007189 3.7e-22 109.0 83 75.9
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 4.8e-22 108.6 89 70.8
FAN09G0574 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.3e-22 108.2 75 81.3
FAN17G1596 Fragaria x ananassa HOM05D006782 ORTHO05D011275 8.2e-22 107.8 73 79.5
FAN14G3775 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.4e-21 106.3 71 81.7
FAN11G0001 Fragaria x ananassa HOM05D000008 ORTHO05D000005 1.2e-20 104.0 84 72.6
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-20 104.0 78 74.4
FAN03G1342 Fragaria x ananassa HOM05D000020 ORTHO05D007189 1.6e-20 103.6 71 83.1
FAN28G0431 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.9e-19 99.4 84 69.0
FvH4_6g34462 Fragaria vesca HOM05D006782 ORTHO05D011275 3.8e-19 99.0 88 72.7
FAN23G1515 Fragaria x ananassa HOM05D006782 ORTHO05D011275 8.5e-19 97.8 83 72.3
FAN28G1305 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.9e-18 96.7 83 67.5
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.2e-18 94.7 123 52.8
FAN28G0105 Fragaria x ananassa HOM05D006782 ORTHO05D001690 1.4e-16 90.5 88 65.9
FAN18G0595 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.3e-16 89.7 72 75.0
Prupe.2G245200 Prunus persica HOM05D000020 ORTHO05D007189 2.4e-13 79.7 91 54.9
MD07G1213000 Malus domestica HOM05D000020 ORTHO05D007189 5.4e-13 78.6 92 55.4
MD01G1145800 Malus domestica HOM05D000020 ORTHO05D007189 1.2e-12 77.4 91 54.9
FAN17G2023 Fragaria x ananassa HOM05D011019 ORTHO05D200767 2.9e-11 72.8 41 95.1
FAN18G1219 Fragaria x ananassa HOM05D010664 ORTHO05D206657 2.9e-11 72.8 56 73.2
FAN11G1676 Fragaria x ananassa HOM05D010664 ORTHO05D210082 3.8e-11 72.4 56 73.2
FAN26G0390 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.8e-11 72.4 54 75.9
FAN14G1694 Fragaria x ananassa HOM05D006782 ORTHO05D204977 6.5e-11 71.6 99 57.6
RcHm_v2.0_Chr1g0369251 Rosa chinensis HOM05D000020 ORTHO05D007189 2.5e-10 69.7 56 71.4
CANSAT56G3422 Cannabis sativa HOM05D000020 ORTHO05D007189 6.1e-09 65.1 69 52.2
TWI09G0809 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 1.0e-08 64.3 70 57.1
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.8e-08 63.5 59 66.1
ClCG07G003890 Citrullus lanatus HOM05D000020 ORTHO05D007189 5.2e-08 62.0 77 50.6
FvH4_4g06881 Fragaria vesca HOM05D006782 ORTHO05D011275 8.8e-08 61.2 78 60.3
CsaV3_5G008860 Cucumis sativus L. HOM05D000020 ORTHO05D007189 1.2e-07 60.8 81 53.1
Sed0021137 Sechium edule HOM05D000020 ORTHO05D007189 1.2e-07 60.8 88 47.7
Sabra10G0149100 Salix brachista HOM05D000020 ORTHO05D007189 2.0e-07 60.1 88 43.2
Lsat_1_v5_gn_9_63241 Lactuca sativa HOM05D000020 ORTHO05D007189 2.6e-07 59.7 70 45.7
TWI73G0310 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 2.6e-07 59.7 89 51.7
Medtr5g081720 Medicago truncatula HOM05D000020 ORTHO05D007189 4.4e-07 58.9 78 43.6
Sed0018426 Sechium edule HOM05D000020 ORTHO05D007189 4.4e-07 58.9 88 48.9
Ciclev10033928m.g Citrus clementina HOM05D000020 ORTHO05D007189 5.7e-07 58.5 90 47.8
FAN12G3668 Fragaria x ananassa HOM05D001374 ORTHO05D004296 1.3e-06 57.4 54 68.5
Lalb_Chr04g0250801 Lupinus albus HOM05D000020 ORTHO05D007189 1.3e-06 57.4 81 43.2
Phvul.008G227100 Phaseolus vulgaris HOM05D000020 ORTHO05D007189 1.7e-06 57.0 88 40.9
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 2.2e-06 56.6 77 54.5
Lsat_1_v5_gn_2_120421 Lactuca sativa HOM05D000020 ORTHO05D007189 2.2e-06 56.6 83 45.8
THA.LOC104810181 Tarenaya hassleriana HOM05D000020 ORTHO05D007189 2.8e-06 56.2 76 39.5
FAN12G2409 Fragaria x ananassa HOM05D001374 ORTHO05D004296 3.7e-06 55.8 54 66.7
PGR044G2611 Punica granatum HOM05D000020 ORTHO05D007189 3.7e-06 55.8 111 37.8
Lalb_Chr10g0104971 Lupinus albus HOM05D000020 ORTHO05D007189 6.3e-06 55.1 49 49.0
Cpa.g.sc19.225 Carica papaya HOM05D000020 ORTHO05D007189 8.3e-06 54.7 90 43.3


User provided reference genes

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