Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.5e-214 749.2 374 100.0
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 5.8e-198 694.1 418 85.6
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 5.1e-194 681.0 421 84.6
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 5.1e-186 654.4 416 81.7
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 1.0e-162 577.0 421 71.5
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.2e-155 553.5 421 69.6
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 1.8e-146 523.1 412 65.3
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 3.7e-144 515.4 406 64.5
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.8e-143 513.1 421 62.2
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.9e-141 505.8 412 62.4
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.2e-139 500.4 422 61.1
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 3.6e-139 498.8 421 61.8
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 6.1e-139 498.0 415 61.9
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.8e-138 496.5 418 61.5
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 2.6e-137 492.7 416 60.8
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.8e-136 488.4 417 61.4
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.8e-135 486.5 406 63.1
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 9.1e-135 484.2 423 61.2
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.5e-134 482.3 410 63.2
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 4.5e-134 481.9 414 61.1
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.1e-131 473.0 414 59.7
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.8e-131 472.6 422 59.2
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 8.0e-131 471.1 411 59.6
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.0e-130 470.7 402 60.7
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 4.0e-130 468.8 394 61.4
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 8.9e-130 467.6 406 57.6
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 3.4e-129 465.7 434 58.3
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.4e-129 465.7 403 60.3
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 9.8e-129 464.2 420 59.0
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.3e-128 463.8 391 61.1
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 2.2e-128 463.0 395 59.5
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 6.3e-128 461.5 418 59.6
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 8.3e-128 461.1 402 59.2
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 4.1e-127 458.8 414 58.9
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 2.0e-126 456.4 444 55.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 3.5e-126 455.7 422 57.8
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 5.9e-126 454.9 400 58.0
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 7.8e-126 454.5 430 56.3
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 3.8e-125 452.2 413 58.8
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 3.8e-125 452.2 422 58.8
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 1.9e-124 449.9 430 57.0
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.9e-124 449.9 442 55.0
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 3.3e-124 449.1 426 58.5
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 4.3e-124 448.7 398 58.5
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 9.5e-124 447.6 405 57.3
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 9.5e-124 447.6 403 59.1
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.6e-123 446.8 418 56.9
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 2.1e-123 446.4 359 63.0
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 6.1e-123 444.9 405 57.5
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.8e-122 443.4 422 57.1
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 4.4e-121 438.7 387 57.6
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.5e-121 438.0 396 57.1
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.9e-120 435.3 358 62.6
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.3e-117 426.4 391 56.5
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.6e-115 420.2 388 56.2
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.4e-114 417.2 392 57.9
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.9e-111 406.8 398 52.5
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 3.9e-109 399.1 326 62.9
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 2.5e-108 396.4 379 54.4
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.4e-106 390.6 379 53.6
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 5.2e-106 388.7 341 59.2
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 8.9e-106 387.9 450 50.7
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 2.6e-105 386.3 371 53.6
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.4e-103 380.6 372 53.8
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 7.1e-103 378.3 409 50.6
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.2e-99 367.5 428 50.5
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 2.6e-97 359.8 245 68.2
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.7e-94 349.7 241 68.9
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.1e-92 344.4 235 70.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.5e-92 344.0 245 68.6
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 3.1e-90 336.3 240 68.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 4.0e-90 335.9 236 69.1
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 7.3e-84 315.1 364 49.2
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.8e-82 310.5 415 44.8
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 1.1e-79 301.2 401 48.9
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.2e-73 281.2 369 42.3
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 2.2e-72 276.9 327 47.1
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.3e-69 266.9 313 45.4
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.3e-67 261.2 275 53.5
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 5.3e-66 255.8 343 42.6
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 5.8e-65 252.3 179 67.6
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.0e-57 227.3 413 34.9
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.6e-54 217.6 229 50.2
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 6.1e-54 215.7 277 46.9
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 6.7e-53 212.2 198 56.6
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 2.2e-51 207.2 205 52.7
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.0e-41 174.1 137 66.4
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.5e-39 166.0 129 69.8
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 9.4e-39 165.2 111 78.4
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 3.7e-35 153.3 203 46.3
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 9.7e-28 128.6 100 63.0
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 9.7e-28 128.6 123 53.7
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 3.6e-22 110.2 125 48.0
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.5e-20 104.8 125 44.8
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.5e-20 104.8 125 44.8
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 4.4e-20 103.2 65 86.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 2.8e-19 100.5 130 43.1
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 3.1e-18 97.1 83 57.8
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.2e-15 85.9 86 51.2
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 6.1e-14 82.8 56 71.4
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 1.2e-12 78.6 131 35.9
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.5e-12 78.2 43 93.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 2.2e-11 74.3 95 42.1
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 8.6e-08 62.4 61 52.5
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 4.3e-07 60.1 53 56.6


User provided reference genes

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