Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 3.2e-56 221.5 109 100.0
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.2e-56 221.5 109 100.0
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.2e-56 221.5 109 100.0
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.1e-45 186.4 116 83.6
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.3e-44 183.0 116 82.8
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 8.5e-41 170.2 119 78.2
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 4.1e-19 98.2 111 49.5
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 1.6e-18 96.3 113 52.2
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 1.6e-18 96.3 111 49.5
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 1.6e-18 96.3 115 53.9
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 2.7e-18 95.5 102 52.0
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 3.8e-17 91.7 98 54.1
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 5.0e-17 91.3 102 49.0
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 7.3e-16 87.4 91 51.6
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.2e-15 86.7 108 51.9
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.8e-15 85.5 91 50.5
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 4.7e-15 84.7 112 44.6
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 4.7e-15 84.7 108 44.4
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 6.1e-15 84.3 115 48.7
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 1.0e-14 83.6 83 53.0
Cpa.g.sc1.41 Carica papaya HOM05D008112 ORTHO05D010225 1.8e-14 82.8 109 49.5
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 2.3e-14 82.4 109 43.1
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.3e-14 82.4 91 48.4
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 2.3e-14 82.4 116 42.2
Lsat_1_v5_gn_4_17580 Lactuca sativa HOM05D008112 ORTHO05D010225 3.0e-14 82.0 113 47.8
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 8.9e-14 80.5 111 45.0
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 3.4e-13 78.6 86 47.7
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 4.4e-13 78.2 113 45.1
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 2.2e-12 75.9 112 45.5
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 6.4e-12 74.3 111 38.7
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 2.4e-11 72.4 122 41.0
Sabra10G0094800 Salix brachista HOM05D008112 ORTHO05D010225 7.0e-11 70.9 84 50.0
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 1.2e-10 70.1 101 43.6
Phvul.003G035700 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 1.6e-10 69.7 111 40.5
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 4.6e-10 68.2 110 38.2
Phvul.007G027300 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 1.3e-09 66.6 112 38.4
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 1.7e-09 66.2 110 39.1
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 5.0e-09 64.7 102 40.2
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 6.6e-09 64.3 80 46.2
ECA246G3993 Erigeron canadensis HOM05D008112 ORTHO05D010225 8.6e-09 63.9 105 38.1
DCAR_023658 Daucus carota HOM05D008112 ORTHO05D010225 1.1e-08 63.5 117 36.8
SGA_v2.0_scaffold124G33520 Striga asiatica HOM05D008112 ORTHO05D010225 1.5e-08 63.2 104 39.4
Sed0024639 Sechium edule HOM05D008112 ORTHO05D010225 2.5e-08 62.4 106 39.6
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 9.5e-08 60.5 109 38.5
TPR.G39819 Trifolium pratense HOM05D008112 ORTHO05D010225 3.6e-07 58.5 88 39.8
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 4.7e-07 58.2 90 38.9
Lsat_1_v5_gn_3_59220 Lactuca sativa HOM05D008112 ORTHO05D010225 4.7e-07 58.2 104 41.3
Lalb_Chr02g0145981 Lupinus albus HOM05D008112 ORTHO05D010225 4.7e-07 58.2 114 35.1
Lalb_Chr06g0166071 Lupinus albus HOM05D008112 ORTHO05D010225 4.7e-07 58.2 96 37.5
THA.LOC109117083 Tarenaya hassleriana HOM05D010264 ORTHO05D012423 1.1e-06 57.0 101 37.6
MSTRG.840 Avicennia marina HOM05D008112 ORTHO05D010225 1.4e-06 56.6 121 37.2
AL1G39880 Arabidopsis lyrata HOM05D010181 ORTHO05D012280 2.3e-06 55.8 92 39.1
ClCG08G005370 Citrullus lanatus HOM05D038709 ORTHO05D010225 4.0e-06 55.1 108 35.2
Lj5g0021475 Lotus japonicus HOM05D008112 ORTHO05D010225 4.0e-06 55.1 111 35.1
Sp1g22780 Schrenkiella parvula HOM05D010181 ORTHO05D012280 4.0e-06 55.1 95 37.9
CARHR026030 Cardamine hirsuta HOM05D010181 ORTHO05D012280 5.2e-06 54.7 99 40.4
A07p12620 Brassica napus HOM05D010181 ORTHO05D012280 6.8e-06 54.3 93 35.5
BraA07t29040Z Brassica rapa HOM05D010181 ORTHO05D012280 6.8e-06 54.3 93 35.5
CsaV3_5G034340 Cucumis sativus L. HOM05D008112 ORTHO05D010225 8.9e-06 53.9 83 36.1


User provided reference genes

Program Settings