Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3659 Fragaria x ananassa HOM05D001064 ORTHO05D206603 8.7e-41 169.9 85 100.0
FAN07G1819 Fragaria x ananassa HOM05D001064 ORTHO05D000885 3.8e-12 74.7 68 60.3
FAN17G0143 Fragaria x ananassa HOM05D001064 ORTHO05D000885 3.8e-12 74.7 68 60.3
FAN22G1939 Fragaria x ananassa HOM05D001064 ORTHO05D000885 3.8e-12 74.7 68 60.3
FvH4_4g33760 Fragaria vesca HOM05D001064 ORTHO05D000885 2.5e-11 72.0 68 57.4
FAN12G0107 Fragaria x ananassa HOM05D001064 ORTHO05D000885 2.5e-11 72.0 68 57.4
RcHm_v2.0_Chr4g0443291 Rosa chinensis HOM05D001064 ORTHO05D000885 2.3e-09 65.5 68 52.9
Rhsim09G0091400 Rhododendron simsii HOM05D001064 ORTHO05D000885 1.1e-08 63.2 68 51.5
Ah.09g228600 Amaranthus hybridus HOM05D001064 ORTHO05D000885 2.5e-08 62.0 37 75.7
TAR622G0372 Trochodendron aralioides HOM05D001064 ORTHO05D000885 5.7e-08 60.8 37 81.1
Atru.chr11.451 Acer truncatum HOM05D001064 ORTHO05D000885 9.7e-08 60.1 37 75.7
arahy.Tifrunner.gnm1.ann1.ERHS70 Arachis hypogaea HOM05D001064 ORTHO05D000885 1.3e-07 59.7 52 57.7
Actinidia36634 Actinidia chinensis HOM05D001064 ORTHO05D000885 1.7e-07 59.3 37 75.7
AT1G70680 Arabidopsis thaliana HOM05D001064 ORTHO05D000885 2.2e-07 58.9 47 61.7
Psat6g045280 Pisum sativum HOM05D001064 ORTHO05D000885 2.8e-07 58.5 37 75.7
CSS0004979 Camellia sinensis var. sinensis HOM05D001064 ORTHO05D000885 3.7e-07 58.2 47 61.7
MD16G1020300 Malus domestica HOM05D001064 ORTHO05D000885 4.8e-07 57.8 37 73.0
Prupe.1G332000 Prunus persica HOM05D001064 ORTHO05D000885 4.8e-07 57.8 37 70.3
Actinidia12387 Actinidia chinensis HOM05D001064 ORTHO05D000885 6.3e-07 57.4 37 73.0
AL2G30110 Arabidopsis lyrata HOM05D001064 ORTHO05D000885 6.3e-07 57.4 47 59.6
DCAR_023581 Daucus carota HOM05D001064 ORTHO05D000885 6.3e-07 57.4 68 47.1
Lj3C865T13 Lonicera japonica HOM05D001064 ORTHO05D000885 6.3e-07 57.4 37 73.0
Cc11_g07000 Coffea canephora HOM05D001064 ORTHO05D000885 8.2e-07 57.0 36 75.0
Psat6g045040 Pisum sativum HOM05D001064 ORTHO05D000885 8.2e-07 57.0 37 70.3
Psat6g045120 Pisum sativum HOM05D001064 ORTHO05D000885 8.2e-07 57.0 37 70.3
Psat6g045240 Pisum sativum HOM05D001064 ORTHO05D000885 8.2e-07 57.0 37 70.3
Dinv28080 Davidia involucrata HOM05D001064 ORTHO05D000885 1.1e-06 56.6 37 73.0
vmacro22455 Vaccinium macrocarpon HOM05D001064 ORTHO05D000885 1.1e-06 56.6 37 73.0
arahy.Tifrunner.gnm1.ann1.UI9TT7 Arachis hypogaea HOM05D001064 ORTHO05D000885 1.4e-06 56.2 37 67.6
Ciclev10016732m.g Citrus clementina HOM05D001064 ORTHO05D000885 1.4e-06 56.2 37 73.0
Lj6C739T5 Lonicera japonica HOM05D001064 ORTHO05D000885 1.4e-06 56.2 37 73.0
Peaxi162Scf00021g02117 Petunia axillaris HOM05D001064 ORTHO05D000885 1.4e-06 56.2 37 70.3
Potri.010G107900 Populus trichocarpa HOM05D001064 ORTHO05D000885 1.4e-06 56.2 37 70.3
Lsat_1_v5_gn_4_12680 Lactuca sativa HOM05D001064 ORTHO05D000885 1.8e-06 55.8 37 67.6
TPR.G36888 Trifolium pratense HOM05D001064 ORTHO05D000885 1.8e-06 55.8 37 75.7
AUR62028367 Chenopodium quinoa HOM05D001064 ORTHO05D000885 2.4e-06 55.5 37 73.0
Nitab4.5_0001916g0040 Nicotiana tabacum HOM05D001064 ORTHO05D000885 2.4e-06 55.5 43 60.5
Peaxi162Scf00376g00832 Petunia axillaris HOM05D001064 ORTHO05D000885 2.4e-06 55.5 37 73.0
Solyc01g005400.3 Solanum lycopersicum HOM05D001064 ORTHO05D000885 2.4e-06 55.5 37 67.6
Sopen01g001410 Solanum pennellii HOM05D001064 ORTHO05D000885 2.4e-06 55.5 37 67.6
arahy.Tifrunner.gnm1.ann1.59U9MN Arachis hypogaea HOM05D001064 ORTHO05D000885 3.1e-06 55.1 37 67.6
arahy.Tifrunner.gnm1.ann1.6Q641Y Arachis hypogaea HOM05D001064 ORTHO05D000885 3.1e-06 55.1 37 67.6
MBI19_g35818_MAGBIO Magnolia biondii HOM05D001064 ORTHO05D000885 3.1e-06 55.1 37 70.3
MBI19_g36324_MAGBIO Magnolia biondii HOM05D001064 ORTHO05D000885 3.1e-06 55.1 37 70.3
Nitab4.5_0000916g0070 Nicotiana tabacum HOM05D001064 ORTHO05D000885 3.1e-06 55.1 37 67.6
arahy.Tifrunner.gnm1.ann1.GA28YR Arachis hypogaea HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 70.3
arahy.Tifrunner.gnm1.ann1.U6K7SM Arachis hypogaea HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 64.9
Glyma.09G123800 Glycine max HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 67.6
Lj2g0023158 Lotus japonicus HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 67.6
Oeu007181.1 Olea europaea HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 67.6
Potri.008G133800 Populus trichocarpa HOM05D001064 ORTHO05D000885 4.1e-06 54.7 37 67.6
CAN.G36.4 Capsicum annuum HOM05D001064 ORTHO05D000885 5.3e-06 54.3 37 64.9
AUR62025381 Chenopodium quinoa HOM05D001064 ORTHO05D000885 5.3e-06 54.3 37 70.3
Lalb_Chr10g0095911 Lupinus albus HOM05D001064 ORTHO05D000885 5.3e-06 54.3 36 66.7
Medtr1g032160 Medicago truncatula HOM05D001064 ORTHO05D000885 6.9e-06 53.9 37 64.9
Nitab4.5_0003936g0030 Nicotiana tabacum HOM05D001064 ORTHO05D000885 6.9e-06 53.9 37 67.6
Nitab4.5_0008129g0010 Nicotiana tabacum HOM05D001064 ORTHO05D000885 6.9e-06 53.9 37 64.9
TAR629G0015 Trochodendron aralioides HOM05D001590 ORTHO05D001495 6.9e-06 53.9 37 73.0
CAN.G36.5 Capsicum annuum HOM05D001064 ORTHO05D000885 9.1e-06 53.5 37 67.6
AUR62028370 Chenopodium quinoa HOM05D001064 ORTHO05D000885 9.1e-06 53.5 51 56.9
Glyma.09G124400 Glycine max HOM05D001064 ORTHO05D000885 9.1e-06 53.5 36 69.4
Solyc04g007960.4 Solanum lycopersicum HOM05D001064 ORTHO05D000885 9.1e-06 53.5 37 64.9


User provided reference genes

Program Settings