Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-76 289.7 143 100.0
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.1e-75 284.6 143 98.6
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.8e-52 208.8 115 89.6
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 1.6e-50 203.0 143 68.5
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 2.7e-50 202.2 117 88.0
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 7.7e-50 200.7 143 68.5
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.5e-48 195.7 136 71.3
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 6.1e-47 191.0 123 79.7
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-46 189.5 106 88.7
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 7.0e-43 177.6 121 72.7
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.7e-36 156.4 143 57.3
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-36 156.4 111 70.3
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.7e-36 155.2 102 75.5
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.9e-34 147.9 122 61.5
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.9e-34 147.9 122 61.5
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-31 139.0 126 54.8
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-31 139.0 126 54.8
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-31 139.0 126 54.8
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 4.7e-31 138.3 91 72.5
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.1e-31 137.9 75 88.0
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 8.0e-31 137.5 75 88.0
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 8.0e-31 137.5 103 66.0
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.0e-30 137.1 93 73.1
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 5.2e-30 134.8 129 54.3
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 5.2e-30 134.8 132 51.5
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-29 132.1 98 64.3
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.5e-29 131.0 94 68.1
RcHm_v2.0_Chr5g0072311 Rosa chinensis HOM05D000003 ORTHO05D006737 3.2e-27 125.6 110 57.3
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 9.2e-27 124.0 128 48.4
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 2.0e-26 122.9 98 63.3
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 6.0e-26 121.3 140 42.9
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 7.8e-26 120.9 98 68.4
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.8e-26 120.9 105 59.0
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-25 119.8 110 54.5
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 8.6e-25 117.5 128 46.9
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 8.6e-25 117.5 140 44.3
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.6e-25 117.5 61 93.4
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 1.9e-24 116.3 129 45.7
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-23 113.6 94 61.7
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 1.6e-23 113.2 110 50.9
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.1e-23 112.8 132 50.8
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 2.8e-23 112.5 117 47.0
FvH4_6g08193 Fragaria vesca HOM05D000003 ORTHO05D006737 2.8e-23 112.5 129 44.2
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 4.7e-23 111.7 63 87.3
FAN13G3306 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-22 110.5 134 42.5
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-22 110.2 95 51.6
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-22 109.8 143 45.5
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 4.0e-22 108.6 121 47.9
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 6.8e-22 107.8 103 54.4
FAN15G1410 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.4e-21 105.1 117 46.2
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 4.4e-21 105.1 93 51.6
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 1.7e-20 103.2 104 49.0
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 2.2e-20 102.8 118 45.8
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 2.4e-19 99.4 121 44.6
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.2e-19 99.0 89 50.6
FAN19G0394 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.4e-19 98.2 96 49.0
FAN19G1043 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.4e-19 98.2 96 49.0
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.0e-19 97.8 100 49.0
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-18 97.1 118 44.1
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-18 95.5 89 48.3
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 4.6e-18 95.1 116 46.6
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 4.6e-18 95.1 88 54.5
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 7.8e-18 94.4 98 50.0
FAN15G2825 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-17 93.6 107 44.9
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-17 93.2 112 44.6
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 2.3e-17 92.8 81 59.3
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.0e-17 91.7 90 48.9
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 6.6e-17 91.3 90 45.6
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 4.3e-16 88.6 58 72.4
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 4.3e-16 88.6 99 48.5
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 4.3e-16 88.6 80 55.0
FvH4_3g26222 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-15 87.0 129 39.5
FvH4_5g30811 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-14 83.6 101 43.6
FvH4_6g31921 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-14 83.6 86 53.5
FAN05G1256 Fragaria x ananassa HOM05D000031 ORTHO05D000030 4.0e-14 82.0 98 42.9
FAN18G4526 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.0e-13 79.7 82 54.9
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 3.4e-13 79.0 94 48.9
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.7e-12 76.6 55 61.8
FAN04G2364 Fragaria x ananassa HOM05D030836 ORTHO05D035801 6.4e-12 74.7 61 68.9
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 8.3e-12 74.3 50 66.0
FAN12G1814 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-11 73.6 84 45.2
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 9.2e-11 70.9 67 52.2
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 1.6e-10 70.1 121 38.0
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.7e-10 69.3 44 75.0
FAN09G3405 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.7e-10 69.3 73 49.3
FAN18G1324 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.7e-10 69.3 72 51.4
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-10 68.9 59 54.2
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 4.6e-10 68.6 69 46.4
FAN04G0671 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.0e-10 68.2 72 48.6
FvH4_4g07010 Fragaria vesca HOM05D002778 ORTHO05D003112 7.8e-10 67.8 72 47.2
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.3e-09 67.0 43 72.1
Prupe.1G179300 Prunus persica HOM05D000003 ORTHO05D006737 1.7e-09 66.6 109 36.7
FAN17G0585 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.6e-09 64.7 81 43.2
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 8.6e-09 64.3 106 36.8
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-08 63.9 59 50.8
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.1e-08 63.9 101 32.7
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 5.6e-08 61.6 113 30.1
FAN14G0257 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.5e-08 60.8 67 38.8
FAN06G1488 Fragaria x ananassa HOM05D003102 ORTHO05D006737 2.1e-07 59.7 36 72.2
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.8e-07 59.3 56 48.2
FAN11G2439 Fragaria x ananassa HOM05D046867 ORTHO05D045776 2.8e-07 59.3 63 46.0
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.8e-07 59.3 101 32.7
FvH4_3g34330 Fragaria vesca HOM05D046867 ORTHO05D045776 3.6e-07 58.9 63 46.0
FAN08G2392 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.2e-07 58.2 137 34.3
FAN12G0644 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.2e-07 58.2 44 68.2
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 6.2e-07 58.2 105 32.4
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 6.2e-07 58.2 90 33.3
FAN23G2658 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-06 57.4 94 38.3
FAN16G3138 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-06 57.0 47 53.2
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 1.8e-06 56.6 77 37.7
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 3.1e-06 55.8 97 27.8
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 3.1e-06 55.8 105 29.5
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 4.0e-06 55.5 107 29.0
Duzib170G1141 Durio zibethinus HOM05D000003 ORTHO05D000167 5.2e-06 55.1 71 33.8
RcHm_v2.0_Chr2g0142781 Rosa chinensis HOM05D008833 ORTHO05D010662 5.2e-06 55.1 108 33.3
CANSAT35G1206 Cannabis sativa HOM05D000003 ORTHO05D000167 6.8e-06 54.7 74 40.5
FAN22G0118 Fragaria x ananassa HOM05D001283 ORTHO05D001109 6.8e-06 54.7 61 44.3
QL11p050659 Quercus lobata HOM05D002097 ORTHO05D002248 8.9e-06 54.3 92 34.8
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 8.9e-06 54.3 99 31.3
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 8.9e-06 54.3 99 31.3


User provided reference genes

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