Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.1e-162 573.9 303 100.0
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.0e-160 570.1 303 99.3
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 3.4e-156 555.1 305 96.7
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 6.9e-141 504.2 297 88.9
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 3.3e-111 405.6 297 72.1
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 4.4e-111 405.2 294 73.8
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.4e-93 347.1 302 61.3
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.6e-91 337.8 290 63.8
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.1e-90 337.4 275 64.7
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.0e-88 330.9 306 60.5
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 4.0e-88 328.9 288 60.1
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.5e-87 327.0 308 59.7
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.7e-86 323.6 264 63.3
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 6.4e-86 321.6 295 60.3
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 8.3e-86 321.2 300 60.3
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.1e-85 320.9 286 60.8
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.1e-85 320.9 287 61.3
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.1e-85 320.9 293 57.7
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.4e-85 319.7 250 67.6
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.4e-85 319.7 281 63.3
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 3.6e-81 305.8 201 75.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 4.4e-79 298.9 268 60.8
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.4e-79 298.9 289 56.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 5.8e-79 298.5 322 55.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.9e-78 295.4 292 56.8
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 8.3e-78 294.7 259 62.2
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.4e-77 293.1 266 59.0
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.4e-77 293.1 263 62.4
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.2e-77 292.7 296 52.4
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 5.4e-77 292.0 244 63.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 7.0e-77 291.6 257 61.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 9.2e-77 291.2 257 61.5
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.2e-76 290.8 256 66.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.6e-76 290.4 260 59.6
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.0e-76 290.0 259 60.6
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.7e-76 289.7 253 61.7
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.7e-76 289.7 273 58.6
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.7e-76 289.7 292 56.2
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 4.6e-76 288.9 244 63.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 7.8e-76 288.1 253 59.7
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 7.8e-76 288.1 269 56.9
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 1.0e-75 287.7 254 59.1
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 3.0e-75 286.2 260 58.5
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 3.0e-75 286.2 291 53.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.9e-75 285.8 254 59.1
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 3.9e-75 285.8 212 68.4
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.9e-75 285.8 264 57.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 6.6e-75 285.0 249 59.8
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.3e-74 282.3 297 54.2
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.3e-74 281.6 272 57.4
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 9.5e-74 281.2 275 56.4
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 9.5e-74 281.2 258 59.3
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.5e-74 281.2 275 56.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 9.5e-74 281.2 256 58.6
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.2e-73 280.8 280 57.5
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.2e-73 280.8 240 61.7
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 3.6e-73 279.3 267 57.7
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 6.2e-73 278.5 265 61.1
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 8.1e-73 278.1 249 59.0
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 4.0e-72 275.8 322 51.6
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 8.9e-72 274.6 196 70.4
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 3.4e-71 272.7 227 62.1
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 4.4e-71 272.3 223 62.8
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 4.4e-71 272.3 213 65.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 5.8e-71 271.9 250 58.0
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.9e-70 269.6 253 58.5
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.0e-67 261.2 272 53.7
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 8.6e-67 258.1 275 54.9
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.1e-66 257.7 341 46.9
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.5e-66 257.3 261 57.9
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 5.6e-66 255.4 270 53.3
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 2.8e-65 253.1 206 59.7
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.7e-65 252.3 289 50.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 8.1e-65 251.5 251 55.8
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 9.9e-63 244.6 250 54.0
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 1.7e-62 243.8 262 50.0
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.4e-61 240.0 265 54.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 7.1e-61 238.4 268 48.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 7.8e-60 235.0 274 52.2
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.0e-59 234.6 227 58.6
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.0e-59 234.6 245 57.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.7e-59 233.8 200 62.5
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 7.6e-55 218.4 270 48.5
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 9.9e-55 218.0 215 54.4
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.9e-51 206.1 355 40.0
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.1e-49 200.3 146 65.8
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 6.7e-43 178.7 245 41.2
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.5e-42 177.6 315 37.5
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 1.3e-41 174.5 242 38.8
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.9e-38 163.3 239 42.7
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.4e-37 160.2 190 51.1
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 5.5e-37 159.1 212 48.6
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.8e-33 146.7 97 73.2
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 4.5e-31 139.4 142 57.7
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 5.5e-29 132.5 204 45.1
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 3.9e-27 126.3 194 43.3
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 1.1e-24 118.2 190 35.3
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.7e-22 110.9 172 37.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.7e-20 103.6 192 32.8
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 4.3e-18 96.3 117 39.3
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.2e-17 94.0 120 51.7
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.2e-17 94.0 120 51.7
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 3.1e-16 90.1 162 37.7
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 4.1e-16 89.7 147 45.6
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.4e-15 86.7 62 64.5
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.2e-14 84.0 91 49.5


User provided reference genes

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