Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.3e-254 880.6 455 100.0
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 3.5e-253 877.9 455 99.6
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.3e-236 822.8 457 94.1
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.2e-233 810.8 457 93.9
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.1e-226 787.3 456 91.0
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 1.2e-221 773.1 461 87.9
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 3.6e-186 655.2 461 75.1
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.8e-185 652.9 464 75.6
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 7.4e-171 604.4 463 68.3
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 7.4e-171 604.4 463 68.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.0e-168 596.3 446 70.0
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 5.8e-168 594.7 443 70.2
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 8.4e-167 590.9 412 71.4
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.1e-161 573.9 421 67.9
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.8e-161 573.2 437 66.8
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 4.5e-160 568.5 429 68.1
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.3e-159 567.0 448 64.5
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.9e-159 565.8 429 68.1
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.9e-158 563.1 448 65.0
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 6.1e-157 558.1 417 67.4
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 2.3e-156 556.2 417 68.3
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 6.7e-156 554.7 393 70.7
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.1e-155 553.9 461 62.9
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 4.3e-155 552.0 461 63.1
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 3.7e-154 548.9 425 66.6
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.8e-154 548.5 408 66.9
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 4.8e-154 548.5 427 68.1
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 2.6e-152 542.7 432 65.7
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.6e-152 542.7 410 66.6
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 4.5e-152 542.0 458 61.8
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 5.9e-152 541.6 448 63.4
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 5.0e-151 538.5 417 67.4
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.1e-150 537.3 439 62.9
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.4e-150 537.0 450 62.7
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.9e-150 536.6 418 63.9
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.9e-150 536.6 442 63.3
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.2e-150 535.4 463 63.9
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 5.5e-150 535.0 423 64.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 3.6e-149 532.3 438 64.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 4.7e-149 531.9 441 64.6
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.8e-148 530.0 401 67.3
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 5.1e-148 528.5 431 63.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.3e-146 523.9 405 64.9
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.1e-145 520.8 455 59.8
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 4.1e-145 518.8 448 61.6
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 6.9e-145 518.1 415 61.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.2e-144 517.3 406 65.5
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 1.5e-144 516.9 425 62.8
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 5.9e-144 515.0 428 62.4
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.0e-143 514.2 453 58.9
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.0e-143 514.2 457 59.1
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.3e-143 513.8 449 59.5
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.7e-143 513.5 454 59.5
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.7e-143 513.5 411 63.3
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.2e-143 513.1 428 62.1
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 2.9e-143 512.7 460 59.8
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 2.9e-143 512.7 381 68.0
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 8.5e-143 511.1 466 59.7
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 1.4e-142 510.4 459 58.8
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.2e-142 508.8 425 62.8
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 9.4e-142 507.7 460 58.5
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.1e-141 506.5 451 59.0
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.7e-141 506.1 451 59.2
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 6.1e-141 505.0 422 62.3
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.4e-140 503.8 452 60.2
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 5.2e-140 501.9 445 60.0
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 5.2e-140 501.9 463 57.2
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.1e-139 500.7 455 59.8
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.5e-139 500.4 487 56.3
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.3e-139 499.2 459 58.4
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 3.3e-139 499.2 377 66.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 4.4e-139 498.8 459 58.4
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 7.4e-139 498.0 454 59.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.7e-138 496.9 459 57.7
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 5.3e-137 491.9 451 59.2
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 4.5e-136 488.8 377 65.3
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.0e-132 477.6 362 66.3
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.8e-132 476.9 412 60.0
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 3.0e-132 476.1 332 70.8
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 3.8e-127 459.1 332 71.7
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 1.5e-126 457.2 413 59.6
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 2.7e-125 453.0 434 55.5
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.8e-121 440.3 431 55.7
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 4.1e-121 439.1 358 61.7
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 5.7e-115 418.7 402 54.2
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.7e-114 417.2 330 64.2
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 2.0e-112 410.2 296 68.9
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 2.5e-110 403.3 334 61.4
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 2.2e-106 390.2 449 48.3
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.3e-103 380.9 296 65.2
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 3.6e-101 372.9 426 48.1
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 8.9e-100 368.2 380 51.8
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.9e-98 363.2 296 61.5
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.7e-95 354.0 266 65.4
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 3.9e-95 352.8 305 60.0
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 3.3e-94 349.7 260 67.7
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 3.1e-92 343.2 408 46.3
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.2e-89 333.2 406 47.3
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 4.1e-89 332.8 419 43.9
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 2.9e-82 310.1 237 62.9
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.3e-78 296.6 333 48.3
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 5.6e-78 295.8 409 41.1
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.1e-52 210.3 150 70.0
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.2e-50 204.1 281 41.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 6.7e-47 192.6 163 58.3
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.0e-44 182.2 168 58.9
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.0e-42 178.7 146 58.9
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.2e-40 171.8 154 56.5
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 8.8e-39 165.6 147 59.2
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.9e-33 147.9 115 66.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.5e-27 127.1 96 61.5
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.0e-26 123.2 109 62.4
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.5e-25 120.9 110 51.8
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.2e-25 120.6 123 56.1
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.7e-23 112.8 91 58.2


User provided reference genes

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